Improvement in the Surveillance System for Livestock Diseases and Antimicrobial Use Following Operational Research Studies in Sierra Leone January–March 2023
Abstract
:1. Introduction
- The reporting system was changed from a monthly to a weekly system [9].
- A follow-up second operational research study was conducted in 2021 as part of another SORT IT course to assess progress. The second study showed that 88% of the expected weekly reports were received at the national level [10]. The second study, conducted in 2022 using March to October 2021 data, provided information on animal diseases and showed that 26% of the sick animals were treated with antimicrobials, of which 77% were considered “critically important for veterinary use” by the WOAH [11]. About 17% of these antibiotics were also considered “critically important in humans” by the World Health Organization (WHO). Apart from these findings, the second study also identified further gaps in the IADSR system.
2. Materials and Methods
2.1. Study Design
2.2. Study Setting
2.2.1. Livestock in Sierra Leone
2.2.2. Animal Health Surveillance in Sierra Leone
2.3. Study Participants/Units, Data Collection and Variables
2.4. Data Analysis and Interpretation
3. Results
4. Discussion
5. Conclusions
Supplementary Materials
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
References
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Mode of Delivery * | To Whom | When | Where | Decisions Made |
---|---|---|---|---|
Three-minute lightning PowerPoint presentation | Livestock staff HQ MAFS stakeholders | March 2022 April 2022 July 2022 | MAFS HQ At the national SORT IT module 4 MAFS stakeholders meeting | Addition of column with new fields for gathering information on antimicrobials in the standard reporting template of animal health weekly surveillance reporting form. |
Published article [10] | Global and MAFS professional groups | May 2022 | Social media platforms: Whatsapp, Facebook, and LinkedIn | Disseminated with stakeholders in the livestock division |
Handouts | Global and MAFS professional groups | April 2022 | Social media platforms: Whatsapp, Facebook, and LinkedIn | Disseminated with stakeholders in the livestock division |
Presentation (full presentation) | MAFS (DVOs/DLOs, Epi Unit, Lab technicians, district surveillance focal personnel/CAHW supervisors | 8 September 2022 | Port Loko | Findings were presented to all DLOs, MAFS senior technical, including the livestock division. |
Presentation (full presentation) | DLOs/DVOs, Epi Unit, Lab technicians, SLARI FAO | September 2022 | Port Loko | Developed Guidelines for infection prevention and appropriate antimicrobial use in the poultry sector. |
Presentation (full presentation) | MAFS (DVOs/DLOs, Epi Unit, Lab technicians, SLARI) | 4–6 October 2022 | Port Loko | Design protocol for implementation of active surveillance for AMR in poultry to obtain measures on the status of AMR in the general population of healthy chickens to which the human population is exposed. |
Presentation (lightning presentation) | MAFS (national and all regional district staff [Epi Unit, DVOs/DLOs]) MOECC/EPA (national and all regional district staff); MOHS (All district staff) /FAO/US-CDC/WHO, CDC/WHO | 2 and 3 November 2022 | Sierra Palms Hotel, Aberdeen, Freetown, Sierra Leone | Shared presentation among DLOs, MOHS and MOECC Cascading of findings was done by district officers to personnel. |
Presentation (full presentation) | DLOs/DVOs, Epi Unit, Lab technicians, FAO | 14–18 November 2022 | FAO office Freetown Road Wilberforce | Profile poultry farms in selected surveillance area for antimicrobial resistance to locate poultry farms and collect AMR active surveillance data |
Recommendation * | Action Status | Status of Implementation |
---|---|---|
Need to further improve reporting system under leadership of the Ministry of Agriculture and Food Security. Development of standard reporting formats. Inclusion of leftover monitoring indicators in reporting formats. | Addition of column with new fields for gathering information on antimicrobials in the standard reporting template of animal health weekly surveillance reporting form. Though the column has been added, there is a need for reminding the District Livestock Officers to report on these new fields. | Partially |
Dedicated human resources for ensuring timely review and analysis. | Completed; five staff with qualifications in veterinary science/data science (four staff with qualification in BSc. Hons Animal Science and one staff with Doctor of Veterinary Medicine) have been recruited. | Ongoing |
Capacity building of livestock officers and community workers. | Training of District Livestock Officers on animal diseases and reporting; training of laboratory technicians in animal health and human health for sample collection and microbiological methods. This training was conducted by the Senior Veterinary Officer (he is also the Head of the Epidemiology Unit, a laboratory expert from the Emergency Center for Transboundary Animal Diseases of the FAO Sierra Leone country office). | Ongoing |
Strengthening laboratory infrastructure for microbiological confirmation of livestock diseases and for assessing antimicrobial resistance. | Partially completed/Partnerships developed with the human health’s Central Public Health Reference Laboratory. However, the services are yet to be operationalized. | Not implemented |
Domain | Status of IADSR System in Various Time Periods | ||
---|---|---|---|
2019 | 2021 | 2023 | |
Data collection | |||
CAHW to DLO/DVO | Paper-based monthly, irregular reporting | Paper-based weekly | Paper-based weekly |
DLO/DVO to national | Paper-based monthly, irregular reporting | Electronic regular weekly | Electronic regular weekly |
Reporting formats | not structured | Structured | Structured |
Mobile tablet (for data collection) | Not available | Available | Available |
Internet connectivity | Not available | Available | Not available |
Number of Diseases reported | 16 | 17 | 17 |
Data analysis | |||
Computers for data compilation, data analysis | 2 computers at national level; no computers at district level | 14 desktops and 14 laptops at district level | 13 desktops and 10 laptops at district level |
Data on animal diseases | Data not analyzed; just submitted to OIE (WOAH) | Data analyzed and disseminated; database available, submitted to OIE (WOAH) | Data analyzed and disseminated to OIE (WOAH) and One Health platform |
Data on antibiotic use | Data not analyzed; just submitted to OIE (WOAH) | Data analyzed and disseminated; database available, submitted to OIE (WOAH) | Data analyzed and disseminated; database available |
Action taken based on the data analysis | |||
Sample collection to confirm animal disease | No Sample collection done; no confirmation done | Sample collection, analysis and confirmation done | Sample collection, analysis and confirmation done |
Mapping of animal diseases for assessing distribution and clustering | Not done | Done | Done |
Motorbikes and Computers | Not available | Available | Available |
Cold Chain | Not available | Available | Available |
Number of diseases reported | 16 | 17 | 17 |
AMR testing at Animal Health laboratory | Not conducted | Not conducted | Not conducted |
District | Number of Weekly Reports Received Out of Expected 1 | |||||
---|---|---|---|---|---|---|
January–December 2019 2 | March–October 2021 3 | January–March 2023 | ||||
n | (%) | n | (%) | n | (%) | |
All districts | 12/780 | (1.5) | 461/525 | (88) | 159/180 | (88) |
Bo | 0/52 | (0) | 33/35 | (97) | 12/12 | (100) |
Bombali | 1/52 | (2) | 35/35 | (100) | 12/12 | (100) |
Bonthe | 0/52 | (0) | 29/35 | (83) | 8/12 | (67) |
Falaba | 0/52 | (0) | 34/35 | (97) | 12/12 | (100) |
Kambia | 3/52 | (6) | 31/35 | (89) | 12/12 | (100) |
Kailahun | 0/52 | (0) | 31/35 | (89) | 10/12 | (83) |
Karene | 0/52 | (0) | 30/35 | (86) | 12/12 | (100) |
Kenema | 8/52 | (15) | 28/35 | (80) | 11/12 | (92) |
Kono | 0/52 | (0) | 32/35 | (91) | 10/12 | (83) |
Koinadugu | 0/52 | (0) | 30/35 | (86) | 6/12 | (50) |
Moyamba | 0/52 | (0) | 31/35 | (89) | 7/12 | (58) |
Port Loko | 0/52 | (0) | 29/35 | (83) | 12/12 | (100) |
Pujehun | 0/52 | (0) | 31/35 | (89) | 12/12 | (100) |
Tonkolili | 0/52 | (0) | 26/35 | (74) | 11/12 | (92) |
Western Area | 0/52 | (0) | 31/35 | (89) | 12/12 | (100) |
District | Median Number (IQR 1) of CAHWs Available per District per Week | Percentage of CAHWs Reporting per Week | Number of Weeks with 100% Reporting from CAHWs/Expected Number of Reports (%) | |
---|---|---|---|---|
Minimum | Maximum | |||
All districts | 10 (8–14) | 11% | 100% | 88/180 (49%) |
Bo | 10 (10–10) | 88% | 100% | 11/12 (92%) |
Bombali | 15 (15–15) | 20% | 100% | 1/12 (8%) |
Bonthe | 7 (7–7) | 57% | 100% | 2/12 (17%) |
Falaba | 9 (9–9) | 100% | 100% | 12/12 (100%) |
Kambia | 13 (13–13) | 46% | 100% | 1/12 (8%) |
Kailahun | 8 (7–8) | 71% | 100% | 2/12 (17%) |
Kerene | 7 (7–10) | 70% | 100% | 10/12 (83%) |
Kenema | 8 (8–8) | 25% | 100% | 2/12 (17%) |
Kono | 15 (15–15) | 60% | 67% | 0/12 (0%) |
Koinadugu | 14 (14–14) | 86% | 100% | 2/12 (17%) |
Moyamba | 9 (9–9) | 11% | 78% | 0/12 (0%) |
Port Loko | 10 (10–10) | 100% | 100% | 12/12 (100%) |
Pujehun | 25 (25–26) | 100% | 100% | 12/12 (100%) |
Tonkolili | 8 (8–10) | 88% | 100% | 9/12 (75%) |
Western Area | 4 (4–4) | 100% | 100% | 12/12 (100%) |
Gaps Identified in 2021 * | Status in 2023 |
---|---|
Data quality issues found in 152 out of 1950 sub-reports | Data quality issues found in 7 out of 1012 sub-reports |
Inconsistency between numbers of susceptible vs. sick vs. treated (14 sub-reports) | No inconsistency |
Antimicrobial/anthelmintic use was reported, but the list of drugs prescribed did not include any antimicrobial/anthelmintic (97 sub-reports) | No inconsistency |
Treatment details provided include antimicrobials/anthelmintic drugs, but the number treated with antimicrobials//anthelmintics reported as “0” (27 sub-reports) | One sub-report |
Missing data in sub-reports | Seven sub-reports |
Diagnosis missing, though treatment details and numbers of sick animals are provided (22 sub-reports) | No inconsistency |
Name of affected species missing (22 sub-reports) | One sub-report |
Humans reported as affected species (11 sub-reports) in cases of dog and monkey bites, with no information on the treatment offered to affected animal species | Six sub-reports |
Limitations in the design of reporting fields | |
No uniform categorizations for locations, diseases, species, and treatment (use of free text fields) Specific name of antimicrobial was not mentioned, and therefore antimicrobial use classification categorization was not possible (253 sub-reports) | Issue persists Issue persists (120 sub-reports) |
Unable to ascertain if the disease reports are from a single farm or multiple farms | Issue persists |
Anthelmintics are also reported under usage of antimicrobials | Anthelmintics reported separately |
Parameters missing in the current format | |
Timeliness of reporting | Not available |
Number of CAHWs reporting per week | Reported |
Level of diagnostic certainty | Not available |
Duration of treatment and route of administration of drugs | Not available |
Data on follow-up of cases | Not available |
Clear disaggregation for sub-reports | Not available |
Livestock Species (as Reported) | March—October 2021 1 | January—March 2023 | ||||||||
---|---|---|---|---|---|---|---|---|---|---|
Susceptible Livestock | Sick Animals | Sick Animals Treated with Antimicrobials | Susceptible Livestock | Sick Animals | Sick Animals Treated with Antimicrobials | |||||
N | N | (%) 2 | n | (%) 3 | N | n | (%) 2 | n | (%) 3 | |
Cattle | 1175 | 362 | (30.8) | 168 | (46.4) | 460 | 89 | (19) | 35 | (39) |
Dogs | 711 | 117 | (16.5) | 43 | (36.8) | 218 | 93 | (43) | 12 | (13) |
Donkeys | 7 | 4 | (57.1) | 1 | (25.0) | 0 | 0 | 0 | 0 | |
Fowl | 6569 | 914 | (13.9) | 3 | (0.3) | 1245 | 101 | (8) | 8 | (8) |
Goat | 22,198 | 6229 | (28.1) | 1576 | (25.3) | 15306 | 2911 | (19) | 799 | (27) |
Goats and Sheep 4 | 1409 | 835 | (59.3) | 402 | (48.1) | 34 | 17 | (50) | 0 | 0 |
Horse | 40 | 16 | (40.0) | 15 | (93.8) | 0 | 0 | 0 | 0 | |
Pig | 1930 | 574 | (29.7) | 105 | (18.3) | 649 | 316 | (49) | 98 | (31) |
Rabbit | 52 | 30 | (57.7) | 4 | (13.3) | 85 | 13 | (15) | 0 | 0 |
Sheep | 10,775 | 2691 | (25.0) | 692 | (25.7) | 16,471 | 2326 | (14) | 495 | (21) |
Not recorded | 401 | 111 | (27.6) | 11 | (2.7) | 17 | 3 | (18) | 3 | (100) |
Total | 45,267 | 11,883 | (26.2) | 3020 | (25.4) | 34,485 | 5869 | (17) | 1450 | (25) |
Livestock Species (as Reported) | March—October 2021 | January—March 2023 | ||||
---|---|---|---|---|---|---|
Any Antimicrobial Used | Critically Important Antimicrobials for Veterinary Use | Any Antimicrobial Used | Critically Important Antimicrobials for Veterinary Use 1 | |||
N | N | (%) 2 | N | N | (%) 2 | |
Cattle | 168 | 145 | (86.3) | 35 | 13 | (37.1) |
Dogs | 43 | 37 | (86.0) | 12 | 6 | (50) |
Donkeys | 1 | 0 | (0.0) | 0 | 0 | 0 |
Fowl | 3 | 3 | (100.0) | 8 | 0 | 0 |
Goat | 1576 | 1070 | (67.9) | 799 | 537 | (67.2) |
Goats and Sheep 3 | 402 | 402 | (100.0) | 0 | 0 | 0 |
Horse | 15 | 15 | (100.0) | 0 | 0 | 0 |
Pig | 105 | 89 | (84.8) | 98 | 59 | (60.2) |
Rabbit | 4 | 4 | (100.0) | 0 | 0 | 0 |
Sheep | 692 | 557 | (80.5) | 495 | 376 | (76) |
Not recorded | 11 | 3 | (27.3) | 3 | 0 | 0 |
Total | 3020 | 2325 | (76.9) | 1450 | 994 | (68.6) |
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Share and Cite
Konteh, S.A.; Bangura, F.I.; Leno, A.; Satyanarayana, S.; Nair, D.; Bah, M.A.; Saidu, S.; Sellu-Sallu, D.; Gborie, S.R.; Kamara, S.M.; et al. Improvement in the Surveillance System for Livestock Diseases and Antimicrobial Use Following Operational Research Studies in Sierra Leone January–March 2023. Trop. Med. Infect. Dis. 2023, 8, 408. https://doi.org/10.3390/tropicalmed8080408
Konteh SA, Bangura FI, Leno A, Satyanarayana S, Nair D, Bah MA, Saidu S, Sellu-Sallu D, Gborie SR, Kamara SM, et al. Improvement in the Surveillance System for Livestock Diseases and Antimicrobial Use Following Operational Research Studies in Sierra Leone January–March 2023. Tropical Medicine and Infectious Disease. 2023; 8(8):408. https://doi.org/10.3390/tropicalmed8080408
Chicago/Turabian StyleKonteh, Samuel Alie, Fatmata Isatu Bangura (Turay), Amara Leno, Srinath Satyanarayana, Divya Nair, Mohamed Alpha Bah, Salam Saidu, David Sellu-Sallu, Sahr Raymond Gborie, Sorie Mohamed Kamara, and et al. 2023. "Improvement in the Surveillance System for Livestock Diseases and Antimicrobial Use Following Operational Research Studies in Sierra Leone January–March 2023" Tropical Medicine and Infectious Disease 8, no. 8: 408. https://doi.org/10.3390/tropicalmed8080408