Integrating UAVs and Deep Learning for Plant Disease Detection: A Review of Techniques, Datasets, and Field Challenges with Examples from Cassava
Abstract
1. Introduction
| Citation | Scope | Strengths | Limitations | Gap Filled by This Review |
|---|---|---|---|---|
| Ahmed et al. [16] | Compares ED-Swin (UAV) vs. Inception-v3 (leaf images) for cassava. | Clear model-level comparison. | Very narrow: only two models; no dataset or pipeline coverage. | Provides a broad synthesis of DL models, datasets, and UAV workflows. |
| Zhu et al. [17] | UAV + DL for general crop diseases. | Strong UAV–sensor overview; global trends. | Not cassava-specific; no cassava datasets or phenotype issues. | Gives a cassava-focused UAV–DL analysis tied to cassava disease traits. |
| Kouadio et al. [18] | UAV disease detection across many crops. | Large quantitative survey (103 papers). | Cassava hardly represented. | Offers a full UAV–DL review dedicated to cassava. |
| Chusyairi et al. [19] | UAV monitoring of cassava fertilization/irrigation. | Good vegetation-index coverage. | Not disease-focused; no pathogen context. | Focuses specifically on cassava disease symptoms and detection. |
| Vasavi et al. [20] | ML/DL for crop leaf disease classification. | Clear ML vs. DL comparison. | Static images; no UAV considerations; not cassava-specific. | Explains how UAV imaging + dataset issues affect cassava disease detection. |
2. Overview of Cassava Diseases and Detection Needs
2.1. Cassava Diseases
2.1.1. Cassava Mosaic Disease (CMD)
2.1.2. Cassava Brown Streak Disease (CBSD)
2.1.3. Cassava Bacterial Blight (CBB)
2.1.4. Cassava Green Mite (CGM)
2.1.5. Other Cassava Diseases


2.2. Why We Should Use UAVs and DL for Smart Agriculture

| Disease | Causal Agent | Key Symptoms | UAV Detectability | Impact on Yield | Source |
|---|---|---|---|---|---|
| CMD 1 | Begomoviruses | Mosaic, chlorosis, twisted/stunted leaves | High—RGB and multispectral | 30–40% average loss; up to 97.3%; annual losses of USD 1.9–2.7 billion | [2,5] |
| CBSD 2 | CBSV 8, UCBSV 9 | Yellowing veins, root necrosis, patchy chlorosis | Moderate—multispectral; variable expression | Up to 70–75% loss in susceptible varieties; USD 100 million annual loss | [2,5] |
| CBB 3 | Xanthomonas axonopodis | Leaf blight, black spots, wilting | Moderate to High—RGB/HSI | Major; not precisely quantified | [2,26] |
| CGM 4 | Mononychellus tanajoa | Scratch-like white spots, leaf shrinkage | Moderate—RGB with image recognition | Up to 30% yield loss | [2,27] |
| RMD 5 | Oligonychus biharensis | Reddish-brown leaf spots, discoloration | High—strong visual cues | Serious but unquantified | |
| BLS 6 | Mycosphaerella henningsii | Brown circular spots, yellowing | High—DL achieves ~98% accuracy | Typically low yield loss | |
| CPD 7 | Phytoplasma | Color intensity variation | Moderate—GIS heat mapping | Serious; data limited | [28] |

3. UAV Technologies for Agricultural Monitoring
3.1. Sensor Technologies for UAV-Based Agricultural Monitoring
| Sensor Type | Spectral Range | Use Case | Advantages | Limitations | Suitability for Cassava Disease Detection | Sources |
|---|---|---|---|---|---|---|
| RGB Camera | Visible (Red, Green, Blue) | General crop monitoring, cassava leaf visual symptoms | Low cost, lightweight, widely available, high-resolution imaging | Cannot capture non-visible stress indicators; limited spectral data | High—effective for CMD and CGM where visual symptoms are clear | [24,35] |
| Multispectral | Visible + Near-Infrared (e.g., Red-edge) | Vegetation health indices (NDVI 10, GNDVI 11), early stress detection | Captures subtle changes in plant physiology; ideal for disease mapping | More expensive than RGB; fewer commercial models for very low-altitude UAVs | High—suitable for early-stage detection of CBSD and BLS | [41,42,43] |
| Hyperspectral | Dozens to hundreds of narrow bands | Early detection of physiological and biochemical stress | High spectral resolution; very sensitive to stress signals | Very high cost, complex processing, heavier payload | Medium—excellent potential but limited by cost and UAV payload limits | [44,45] |
| Thermal Camera | Infrared (Surface Temperature) | Water stress, fungal infections, plant stress diagnostics | Detects stress not visible in RGB; complements visual data | Low spatial resolution; affected by environment and requires calibration | Medium—indirect support; more useful in multi-sensor configurations | [46,47] |
| LiDAR | Laser-based 3D structure detection | Canopy structure, plant height, volume estimation | Provides 3D data, unaffected by light conditions | High cost, not specific to disease unless combined with spectral imaging | Complementary 3D tool for cassava. | [43] |

3.1.1. Multispectral Cameras
3.1.2. RGB Cameras
3.1.3. Other Sensors: Hyperspectral, Thermal and LiDAR
3.2. UAV Data Acquisition Protocols for Agricultural Disease Detection
3.2.1. Flight Altitude
3.2.2. Image Overlap
3.2.3. Time-of-Day Considerations
3.2.4. Environmental Constraints
| Parameter | Recommended Range/Setting | Purpose/Justification | Sources |
|---|---|---|---|
| Flight altitude | 2–5 m | Ensures ultra-high spatial resolution needed to detect subtle foliar symptoms | [24,73] |
| Overlap (front/side) | 80%/60% | Enables high-quality orthomosaics and accurate 3D reconstructions | [35,36,74] |
| Ground sampling distance (GSD) | ~0.5–10 cm/pixel | Determines image detail; lower GSD is ideal for distinguishing symptom-level features | [34,67,75] |
| Camera resolution | ≥12 MP (e.g., 4000 × 3000 pixels) | Higher resolution improves detection of small-scale anomalies | [24,41] |
| Sensor Orientation | Nadir (direct downward) | Minimizes distortion and improves model training consistency | [41,73,76] |
| Time of day | 11:00–13:00 | Reduces shadowing and exposure variability | [34,77] |
| Environmental constraints | Clear sky, low wind (<10 km/h) | Improves image consistency; ensures stable flight | [41,67] |
3.3. Challenges of UAV in Disease Detection in Agriculture
4. Deep Learning Techniques for Plant Disease Detection
4.1. Model Architectures
4.2. Dataset Preparation
4.2.1. Data Collection
4.2.2. Annotation
4.2.3. Data Augmentation and Preprocessing
4.3. Training Strategies
4.4. Strengths and Limitations
5. UAV–DL Integration Framework for Cassava Disease Detection
| Study | Data Source | Sensor | DL Model | Deployment | Real-Time | Category |
|---|---|---|---|---|---|---|
| Unmanned aerial vehicle-based studies (n = 2) | ||||||
| Nnadozie et al., 2023 [24] | 550 mm Quadcopter | Red–blue–green (RGB) | YOLOv5n/s | Edge (Jetson) | Yes | UAV + real-time |
| Zhang et al., 2025 [13] | DJI Phantom 4 Pro | RGB (20 MP) | ED-Swin | desktop graphical processing unit (GPU) | Potential | UAV + Potential |
| Ground-based with real-time capability (n = 3) | ||||||
| Ramcharan et al., 2019 [15] | Handheld camera | RGB (20.2 MP) | Mobile convolutional neural network (CNN) | Smartphone | Yes | Ground + real-time |
| Mrisho et al., 2020 [14] | Smartphone | RGB | PlantVillage Nuru | Smartphone | Yes | Ground + real-time |
| Dosset et al., 2025 [4] | Lab/Ground | Not specified | CDDNet | Edge (Jetson) | Yes | Ground + real-time |
| Ground-based with potential real-time (n = 4) | ||||||
| Sambasivam & Opiyo 2021 [7] | Lab (Kaggle) | RGB | Custom convolutional neural network (CNN) | Mobile (proposed) | Potential | Ground + Potential |
| Ramcharan et al., 2017 [6] | Handheld camera | RGB (20.2 MP) | InceptionV3 | Mobile (testing) | Potential | Ground + Potential |
| Lilhore et al., 2022 [30] | Lab (Kaggle) | Not specified | Enhanced convolutional neural network (CNN) | Future target | Potential | Ground + Potential |
| Sambasivam et al., 2024 [32] | Lab (Kaggle) | Not specified | DenseNet + EfficientNet | Future (Internet of Things) | Potential | Ground + Potential |
| Ground-based without real-time (n = 7) | ||||||
| Akinpelu et al., 2025 [102] | Lab (Kaggle) | Not specified | Visual geometry group (VGG16) | Smartphone | No | Ground + no real-time |
| Elliott et al., 2022 [103] | Lab (controlled) | RGB | Support vector machine (SVM) | Desktop | No | Ground + no real-time |
| Goyal & Gill 2024 [95] | Lab (Kaggle) | Not specified | EfficientNetB3 | Not specified | No | Ground + no real-time |
| Shahriar et al., 2022 [96] | Lab (Kaggle) | RGB | Xception | Desktop | No | Ground + no real-time |
| Maryum et al., 2021 [104] | Lab (Kaggle) | RGB | EfficientNetB4 | Not specified | No | Ground + no real-time |
| Abayomi-Alli et al., 2021 [29] | Lab (Kaggle) | Not specified | MobileNetV2 | Mobile (future) | No | Ground + no real-time |
| Lokesh et al., 2024 [31] | Lab (GAN augmented) | Not specified | CNN + VGG16 + ResNet | Portable (future) | No | Ground + no real-time |
5.1. Image Acquisition
5.2. Preprocessing and Annotation
5.3. Model Training and Inference
5.4. Edge Deployment and Real-Time Decision Support
5.5. Representative Case Studies
| Reference | DL Model/Approach | Platform/Deployment | Outcome/Accuracy | Highlights |
|---|---|---|---|---|
| Ramcharan et al. (2017) [6] | Inception v3 (transfer learning) | TensorFlow on smartphones (Tanzania) | 93% accuracy on 2756 field images | First field-deployable cassava model; multi-disease detection |
| Sambasivam and Opiyo [7] | Various models + SMOTE & focal loss | Kaggle dataset of 10,000 annotated images | Top models achieved > 93% accuracy | Benchmark competition; focused on five disease classes |
| Mrisho, Mbilinyi [14] | Mobile object detection (DL integration) | PlantVillage Nuru-Smartphone mobile application (offline use) | 65–88% accuracy; outperformed farmers and extension agents | Performance improved with multi-leaf analysis |
| Nnadozie, Iloanusi [24] | YOLOv5n/YOLOv5s | NVIDIA Jetson AGX Orin (edge deployment) | YOLOv5s: higher accuracy; YOLOv5n: faster inference | Tested under variable growth stages and weed interference |
| Dosset, Dang [4] | CDDNet (MobileNetV3Small + soft attention) | Lightweight model for real-time classification | 98.95% classification accuracy | High speed and compact; optimized for mobile deployment |
| Zhang, Zhou [13] | ED-Swin Transformer | Field imagery analysis | 98.56% F1-score; 94.32% accuracy | Addressed complex backgrounds and disease morphology |
| Ozichi Emuoyibofarhe (2019) [22] | CSVM, CGSVM | Field imagery analysis. 18,000-image dataset | 83.8% and 61.6% accuracy for CSVM and CGSVM, respectively. | Targeted CMD and CBD. Manual data collection instead of UAV. Implemented ML. |
5.6. Evaluation Metrics and Real-Time Deployment Considerations
| Metric | Purpose/Description | Typical Values (Cassava Studies) | Relevance to UAV–DL Applications |
|---|---|---|---|
| Accuracy | Overall % of correct predictions (true positives + true negatives) | 85–99% [16,30] | Good for initial assessment; may be misleading in imbalanced datasets |
| Precision | % of true positive predictions among all predicted positives | 74–93% (CMD and CBSD detection) | Helps reduce false positives in multi-disease UAV scans |
| Recall (Sensitivity) | % of true positives identified out of all actual positives | 70–95% [16,32] | Critical for early-stage detection where missing diseased plants is costly |
| F1 Score | Harmonic mean of precision and recall; balances both in one metric | 88–98.56% (ED-Swin [13], EfficientNet [32,94,95,104]) | Especially useful in imbalanced datasets (e.g., CMD-dominant images) |
| IoU (intersection over union) | Degree of overlap between predicted and actual bounding boxes | >0.5 (threshold for object detection) | Key metric for evaluating object detectors like YOLOv5n/s |
| mAP (mean average precision) | Averaged precision across all classes and IoU thresholds | >90% (YOLO [24]) | Comprehensive object detection score; standard for detection tasks |
| Inference time/FPS | Time taken per image or frames per second (real-time performance) | 0.016 s/image or >30 FPS (YOLOv5n) | Vital for edge deployment and UAV real-time inference |
| Model size/parameters | Number of parameters, affecting memory use and portability | <2M (YOLOv5n), ~3M (CDDNet) | Determines compatibility with smartphones and UAV onboard processors |
6. Comparative Review of Existing Related Studies
Comparative Review of Existing Studies on UAV and/or DL Applications for Cassava Disease Detection
| Author, Year | DL Method | UAV Type/Data Source | Dataset | Disease Target | Accuracy | Limitation |
|---|---|---|---|---|---|---|
| Sambasivam & Opiyo, 2021 [7] | CNNs + SMOTE, focal loss | Traditional field survey | 10,000 Uganda cassava images | CMD, CBSD, CGM, CRM, healthy | Over 93% | Small, imbalanced dataset; not UAV-acquired |
| Ramcharan et al., 2017 [6] | Inception v3 (transfer learning) | Handheld camera (Sony Cybershot) | 2756 full leaves; 15,000 leaflets | CMD, CBSD, BLS, RM, GMD | 93% (leaflets); 73–91% (full leaves) | Accuracy varies by input; limited generalization |
| Mrisho et al., 2020 [14] | Mobile CNN (PlantVillage Nuru) | Smartphone images | Ramcharan dataset | CMD, CBSD, CGM, healthy | 65–88% (based on leaf count) | Weak on subtle symptoms; low-light visibility |
| Emuoyibofarhe et al., 2019 [22] | Cubic SVM, Gaussian SVM | UAV noted as future option | Sparse info; Nigeria-based | CMD, CBB, healthy/unhealthy | 83.9% (CSVM); 61.6% (CGSVM) | Traditional ML; no UAV data; limited dataset |
| Dosset et al., 2025 [4] | CDDNet (MobileNetV3 + attention) | Designed for edge; UAV not specified | 27,053–58,807 merged images | CMD, CBSD, CGM, CRM, CBLS, CHL | 97–99% | Meteorological variation; UAV deployment untested |
| Nnadozie et al., 2023 [24] | YOLOv5n/s (object detection) | DJI Phantom 4 Pro V2.0 UAV | Custom dataset, Nigeria | Plant detection (precursor to disease mapping) | Moderate (YOLOv5s better, YOLOv5n faster) | Private data; trade-off between accuracy and speed |
| Zhang et al., 2025 [13] | ED-Swin Transformer | DJI Phantom 4 Pro V2.0 UAV | 54,353 images (China) | Blight, CBSD, CMD, mottle, healthy | 94.32% Accuracy, 98.56% Recall | Complex model; occlusion & lighting issues |
| Hasan Shahriar et al., 2022 [96] | Ensemble CNNs (Xception, etc.) | No UAV; sourced from Kaggle | 21,367 images | CMD, CBSD, CBB, CGM, healthy | 68–91% depending on model | Data from farmers; high GPU demand |
| Abayomi-Alli et al., 2021 [29] | Modified MobileNetV2 + augmentation | Makerere/NARO (field lab dataset) | 5656 labeled images | CMD, CBSD, CGM, CBB, healthy | 0.977–0.997 | No boost for extreme image degradation |
| Akinpelu et al., 2025 [102] | VGG16 (Transfer Learning) | Public Kaggle dataset | 5656 cassava images | CMD, CBSD, CGM, CBB, healthy | 88% (F1: 82%) | Needs regularization & tuning; convergence instability |
| Elliott et al., 2022 [103] | Few-shot SVM (segmentation) | Raspberry Pi box setup | 32 cassava leaves | CBB lesions (segmentation only) | No classification metric | Small dataset; no DL; lacks generalizability |
| Lokesh et al., 2024 [31] | Hybrid CNN + CycleGAN | GAN-augmented Kaggle dataset | 12,880 images | CMD, CBSD, CGM, CBB, healthy | 99.51% hybrid | High compute load; recommends real-time testing |
| Sambasivam et al., 2025 [32] | DenseNet169 + EfficientNetB0 (hybrid) | Kaggle Dataset | ~36,000 images | CMD, CBSD, CGM, CBB, healthy | 89.94% hybrid | Poor transferability; dataset imbalance; high computational cost |
| Goyal et al., 2024 [95] | EfficientNetB3, Inception, KNN; ensemble & TL used | Kaggle cassava dataset | 5656 images (5 disease + healthy classes) | CMD, CBSD, CGM, CBB, healthy | 89.9% (EffNetB3); 77% (Incep); 62% (KNN) | CBB, CGM, and CBSD often misclassified; needs improved disambiguation for similar symptom classes |
| Maryum et al., 2021 [104] | EfficientNetB4 + U-Net segmentation; transfer learning | Kaggle 2020 dataset (Uganda) | 21,397 images (segmented vs. raw) | CMD, CBSD, CGM, CBB, healthy | 89.1% (segmented); 81.4% (original) | CMD class imbalance; similar disease confusion (CGM as CMD); CBSD mislabeled as healthy |
7. Dataset Availability and Benchmarking Issues in UAV–DL for Cassava Disease Detection
| Dataset Name | Origin/Authors | Content/Categories | Size | UAV-Based | Public Access | Reference/URL |
|---|---|---|---|---|---|---|
| Kaggle CVPR 2019 Dataset | AIcrowd, Makerere University, IITA | Five fine-grained cassava leaf diseases | 10,000 images | No | Public | Kaggle Dataset |
| Cassava Image Dataset | Ramcharan et al. (2017), IITA Tanzania | Whole cassava leaves (CBSD, CMD, BLS, GMD, RMD, Healthy) | 2756 images | No | Public | Ramcharan et al., 2017 [6] |
| Leaflet Cassava Dataset | Ramcharan et al. (derived) | Cropped individual leaflets (same categories as above) | 15,000 images | No | Public | Derived from Cassava Image Dataset [6] |
| Cassava Plant Disease Merged | Dosset et al. (2025) | CBSD, CMD, CGM, CRM, CBLS, Healthy | 27,053 images | No | Not Public | Dosset et al., 2025 [4] |
| Cassava Leaf Disease Combined | Dosset et al. (2025) | Cassava Image + other datasets merged (multi-source) | 58,807 images | No | Not Public | Dosset et al., 2025 [4] |
| PlantVillage Dataset | Hughes & Salathe (2015) | Multi-crop diseases incl. cassava | 26,590 (multi-crop) | No | Public | GitHub Repository [113] |
| iBean Leaf Dataset | AIR Lab Makerere University, (2020) | Bean disease (non-cassava, for model transfer evaluation) | 1296 images | No | Public | https://github.com/AI-Lab-Makerere/ibean (accessed on 12 August 2025) [25] |
| Nnadozie et al. Dataset | Nnadozie et al. (2023), Nigeria | UAV RGB imagery for cassava plant detection | Size unspecified | Yes | Not Public | In-house dataset, referenced in Nnadozie et al., 2023 [24] |
| Zhang et al. Dataset | Zhang et al. (2025), Guangxi, China | UAV + ground camera; 5 classes (bacterial blight, mosaic, mottle, CBSD, healthy) | 54,353 images | Yes | Not Public | In-house, referenced in Zhang et al., 2025 [13] |
| Makerere-NARO Dataset | Abayomi-Alli et al. (2021), Makerere & National Crops Resources Research Institute | High- and low-quality cassava disease images; used for augmentation study | 5656 labelled images | No | Not Public | Referenced in Abayomi-Alli et al., 2021 [29] |
| Elliott et al. Dataset | Elliott et al. (2022), Advanced digital SVM setup | Time-lapse images from Raspberry Pi box for CBB lesion segmentation | 32 leaves | No | Not Public | Referenced in Elliott et al., 2022 [103] |
| Kaggle Combined Cassava Dataset | Sambasivam et al. (2025) | Five categories; used to benchmark hybrid DL models | ~36,000 images | No | Public | https://www.kaggle.com/competitions/cassava-leaf-disease-classification/data (accessed on 12 August 2025) [32] |
| Lokesh CycleGAN Dataset | Lokesh et al. (2024) | Generated using GANs for 5 disease categories; used to test hybrid CNNs | 12,880 (augmented) | No | Not Public | Dataset described in Lokesh et al., 2024 [31] |
7.1. Availability and Characteristics of Cassava Datasets
7.2. Benchmarking Challenges
7.3. Implications for Model Reliability and Research Gaps
8. Conclusions and Future Directions
Funding
Data Availability Statement
Conflicts of Interest
References
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Ahmed, W.A.; Abiola, O.A.; Yang, D.; Olatoyinbo, S.F.; Jing, G. Integrating UAVs and Deep Learning for Plant Disease Detection: A Review of Techniques, Datasets, and Field Challenges with Examples from Cassava. Horticulturae 2026, 12, 87. https://doi.org/10.3390/horticulturae12010087
Ahmed WA, Abiola OA, Yang D, Olatoyinbo SF, Jing G. Integrating UAVs and Deep Learning for Plant Disease Detection: A Review of Techniques, Datasets, and Field Challenges with Examples from Cassava. Horticulturae. 2026; 12(1):87. https://doi.org/10.3390/horticulturae12010087
Chicago/Turabian StyleAhmed, Wasiu Akande, Olayinka Ademola Abiola, Dongkai Yang, Seyi Festus Olatoyinbo, and Guifei Jing. 2026. "Integrating UAVs and Deep Learning for Plant Disease Detection: A Review of Techniques, Datasets, and Field Challenges with Examples from Cassava" Horticulturae 12, no. 1: 87. https://doi.org/10.3390/horticulturae12010087
APA StyleAhmed, W. A., Abiola, O. A., Yang, D., Olatoyinbo, S. F., & Jing, G. (2026). Integrating UAVs and Deep Learning for Plant Disease Detection: A Review of Techniques, Datasets, and Field Challenges with Examples from Cassava. Horticulturae, 12(1), 87. https://doi.org/10.3390/horticulturae12010087

