Integrative Genomic and Cytogenetic Analyses Reveal the Landscape of Typical Tandem Repeats in Water Hyacinth
Abstract
:1. Introduction
2. Materials and Methods
2.1. Plant Materials and Genomic DNA Extraction
2.2. De Novo Identification of Genomic Repeats and Chromosome Distribution Analysis
2.3. PCR Amplification and Probe Preparation
2.4. Chromosome Preparation and FISH
3. Results
3.1. Genome-Wide Identification of the Typical Tandem Repeats in the Water Hyacinth Genome
3.2. Chromosome Distribution Patterns of Candidate Typical Tandem Repeats in Water Hyacinth Genome
3.3. Genomic Structure of the Centromeric Tandem Repeat in the Water Hyacinth Genome
3.4. Telomere and ICREc Architecture at the Chromosome Ends of Water Hyacinth
3.5. Genomic Structure of 5S and 35S rDNA Arrays in Water Hyacinth Genome
4. Discussion
5. Conclusions
Supplementary Materials
Author Contributions
Funding
Data Availability Statement
Conflicts of Interest
References
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Feng, L.; Zhuang, Y.; Tian, D.; Zhou, L.; Wang, J.; Fang, J. Integrative Genomic and Cytogenetic Analyses Reveal the Landscape of Typical Tandem Repeats in Water Hyacinth. Horticulturae 2025, 11, 657. https://doi.org/10.3390/horticulturae11060657
Feng L, Zhuang Y, Tian D, Zhou L, Wang J, Fang J. Integrative Genomic and Cytogenetic Analyses Reveal the Landscape of Typical Tandem Repeats in Water Hyacinth. Horticulturae. 2025; 11(6):657. https://doi.org/10.3390/horticulturae11060657
Chicago/Turabian StyleFeng, Liqing, Ying Zhuang, Dagang Tian, Linwei Zhou, Jinbin Wang, and Jingping Fang. 2025. "Integrative Genomic and Cytogenetic Analyses Reveal the Landscape of Typical Tandem Repeats in Water Hyacinth" Horticulturae 11, no. 6: 657. https://doi.org/10.3390/horticulturae11060657
APA StyleFeng, L., Zhuang, Y., Tian, D., Zhou, L., Wang, J., & Fang, J. (2025). Integrative Genomic and Cytogenetic Analyses Reveal the Landscape of Typical Tandem Repeats in Water Hyacinth. Horticulturae, 11(6), 657. https://doi.org/10.3390/horticulturae11060657