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Review

Use of Depleted Oil and Gas Reservoirs as Bioreactors to Produce Hydrogen and Capture Carbon Dioxide

by
Igor Carvalho Fontes Sampaio
1,*,
Isabela Viana Lopes de Moura
1,2,
Josilene Borges Torres Lima Matos
2,
Cleveland Maximino Jones
3 and
Paulo Fernando de Almeida
2,*
1
Biotransformation and Organic Biocatalysis Research Group, Department of Exact Sciences, Santa Cruz State University, Ilhéus 45654-370, Brazil
2
Laboratory of Biotechnology and Ecology of Microorganisms, Institute of Health Sciences, Federal University of Bahia, Salvador 40110-100, Brazil
3
National Institute of Oil and Gas, State University of Rio de Janeiro, Rio de Janeiro 20550-013, Brazil
*
Authors to whom correspondence should be addressed.
Fermentation 2025, 11(9), 490; https://doi.org/10.3390/fermentation11090490 (registering DOI)
Submission received: 15 July 2025 / Revised: 10 August 2025 / Accepted: 22 August 2025 / Published: 23 August 2025
(This article belongs to the Special Issue Biofuels Production and Processing Technology, 3rd Edition)

Abstract

The biological production of hydrogen offers a renewable and potentially sustainable alternative for clean energy generation. In Northeast Brazil, depleted oil reservoirs (DORs) present a unique opportunity to integrate biotechnology with existing fossil fuel infrastructure. These subsurface formations, rich in residual hydrocarbons (RH) and native H2 producing microbiota, can be repurposed as bioreactors for hydrogen production. This process, often referred to as “Gold Hydrogen”, involves the in situ microbial conversion of RH into H2, typically via dark fermentation, and is distinct from green, blue, or grey hydrogen due to its reliance on indigenous subsurface biota and RH. Strategies include nutrient modulation and chemical additives to stimulate native hydrogenogenic genera (Clostridium, Petrotoga, Thermotoga) or the injection of improved inocula. While this approach has potential environmental benefits, such as integrated CO2 sequestration and minimized surface disturbance, it also presents risks, namely the production of CO2 and H2S, and fracturing, which require strict monitoring and mitigation. Although infrastructure reuse reduces capital expenditures, achieving economic viability depends on overcoming significant technical, operational, and biotechnological challenges. If widely applied, this model could help decarbonize the energy sector, repurpose legacy infrastructure, and support the global transition toward low-carbon technologies.
Keywords: hydrogen; oil and gas fields; microbial hydrocarbon conversion; sustainable energy; carbon capture hydrogen; oil and gas fields; microbial hydrocarbon conversion; sustainable energy; carbon capture

Share and Cite

MDPI and ACS Style

Sampaio, I.C.F.; Moura, I.V.L.d.; Matos, J.B.T.L.; Jones, C.M.; Almeida, P.F.d. Use of Depleted Oil and Gas Reservoirs as Bioreactors to Produce Hydrogen and Capture Carbon Dioxide. Fermentation 2025, 11, 490. https://doi.org/10.3390/fermentation11090490

AMA Style

Sampaio ICF, Moura IVLd, Matos JBTL, Jones CM, Almeida PFd. Use of Depleted Oil and Gas Reservoirs as Bioreactors to Produce Hydrogen and Capture Carbon Dioxide. Fermentation. 2025; 11(9):490. https://doi.org/10.3390/fermentation11090490

Chicago/Turabian Style

Sampaio, Igor Carvalho Fontes, Isabela Viana Lopes de Moura, Josilene Borges Torres Lima Matos, Cleveland Maximino Jones, and Paulo Fernando de Almeida. 2025. "Use of Depleted Oil and Gas Reservoirs as Bioreactors to Produce Hydrogen and Capture Carbon Dioxide" Fermentation 11, no. 9: 490. https://doi.org/10.3390/fermentation11090490

APA Style

Sampaio, I. C. F., Moura, I. V. L. d., Matos, J. B. T. L., Jones, C. M., & Almeida, P. F. d. (2025). Use of Depleted Oil and Gas Reservoirs as Bioreactors to Produce Hydrogen and Capture Carbon Dioxide. Fermentation, 11(9), 490. https://doi.org/10.3390/fermentation11090490

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