Taxonomy and Phylogenetic Relationships of Clavulinopsis (Clavariaceae, Agaricales): Description of Six New Species and One Newly Recorded Species from China
Abstract
1. Introduction
2. Materials and Methods
2.1. Specimens
2.2. DNA Extraction, Amplification, and Sequencing
2.3. Morphological Studies
2.4. Alignment and Phylogenetic Analyses
Identification | Specimen No. | GenBank No. (ITS) | GenBank No. (28S) | Location | References |
---|---|---|---|---|---|
Clavulinopsis amoena | PBM3381 | — | HQ877702 | Australia: Tasmania | Birkebak et al. [6]; Hyde et al. [8] |
C. appalachiensis | S.D. Russell iNaturalist # 91596164 | OM809324 | — | USA: Indiana | Unpublished |
C. appalachiensis | TENN074980 | MT196965 | — | USA: Tennessee | Unpublished |
C. aspersa | MHHNU10153 | OQ703777 | OQ703794 | China: Hunan | Present study |
C. aspersa | MHHNU10342 | OQ703778 | OQ703795 | China: Hunan | Present study |
C. aspersa | MHHNU11103 | OQ703779 | OQ703796 | China: Hunan | Present study |
C. aurantiaca | URM <BRA>: 84212 | — | KX227749 | Brazil: Pernambuco | Hyde et al. [8] |
C. aurantiaca | URM <BRA>: 84216 | KC348464 | NG058946 | Brazil: Pernambuco | Hyde et al. [8] |
C. aff. aurantiocinnabarina | JMB08171004 | — | HQ877704 | USA: Tennessee | Birkebak et al. [6]; Hyde et al. [8] |
C. aff. aurantiocinnabarina | JMB08240901 | — | HQ877703 | USA: Tennessee | Birkebak et al. [6]; Hyde et al. [8] |
C. bicolor | MHHNU10381 | OQ703780 | OQ703797 | China: Hainan | Present study |
C. bispora | MHHNU11181 | OQ703781 | OQ703798 | China: Jilin | Present study |
C. bispora | MHHNU11188 | OQ703782 | OQ703799 | China: Jilin | Present study |
C. corallinorosacea | PBM3380 | KP257144 | HQ877707 | Australia: Tasmania | Birkebak et al. [6,23]; Hyde et al. [8] |
C. corniculata | TENN064106 | KP257145 | HQ877713 | USA: Tennessee | Birkebak et al. [6,23]; Hyde et al. [8] |
C. corniculata f. bispora | AMB 18573 | MT055953 | — | Italy | Franchi and M. Marchetti [9] |
C. erubescens | MHHNU8040 | OQ703783 | OQ703800 | China: Hunan | Present study |
C. erubescens | MHHNU10290 | OQ703784 | OQ703801 | China: Shaanxi | Present study |
C. fusiformis | HKAS122627 | ON794403 | — | China | Wang et al. [24] |
C. fusiformis | PBM 2804 | — | EF535273 | USA: Massachusetts | Birkebak et al. [6]; Hyde et al. [8] |
C. fusiformis | TENN064110 | — | HQ877717 | USA: Tennessee | Birkebak et al. [6]; Hyde et al. [8] |
C. fusiformis | 2728 | — | KM248914 | — | Unpublished |
C. gracillima | MO 215748 | KY706170 | — | Canada: Windsor | Hay et al. [25] |
C. gracillima | TENN065662 | — | HQ877708 | USA: Tennessee | Unpublished |
C. helvola | EL 111/04 | EU118617 | EU118617 | Sweden | Birkebak et al. [6]; Hyde et al. [8] |
C. helvola | Lueck6 | KP965770 | KP965788 | Germany: Lueckendorf | Karich et al. [26] |
C. incarnata | MHHNU9314 | OQ703785 | OQ703802 | China: Hunan | Present study |
C. incarnata | MHHNU9813 | OQ703786 | OQ703803 | China: Yunnan | Present study |
C. incarnata | MHHNU11330 | OQ703787 | OQ703804 | China: Yunnan | Present study |
C. incarnata | MHHNU11331 | OQ703788 | OQ703805 | China: Yunnan | Present study |
C. laeticolor | EL 8/00 | EU118618 | EU118618 | Finland | Birkebak et al. [6]; Hyde et al. [8] |
C. luteoalba | BRACR16669 | — | JQ415959 | Denmark: Copenhagen | Hyde et al. [8] |
C. luteoalba | BSI13 147a | OP538704 | — | Switzerland | Unpublished |
C. miyabeana | ZP-2118 | MK427059 | — | China: Hunan | Chen and Zhang, P. [27] |
C. sp. | MCCNNU 00948 | MT587808 | MT587810 | China | Unpublished |
C. sp. | MCCNNU 00952 | MT587809 | MT587811 | China | Unpublished |
C. sulcata | PBM3379 | — | HQ877709 | Australia: Tasmania | Birkebak et al. [6]; Hyde et al. [8] |
C. sulcata | PDD78241 | — | DQ284904 | New Zealand | Dentinger, B.T.M. and McLaughlin, D.J. [28] |
C. trigonospora | AMB: 18557 | NR176720 | NG088120 | Italy: Capezzano Pianore | Franchi and M. Marchetti [9] |
C. trigonospora | AMB: 18587 | — | MT055968 | Italy: Capezzano Pianore | Franchi and M. Marchetti [9] |
C. trigonospora | MHHNU9186 | OQ703789 | OQ703806 | China: Sichuan | Present study |
C. trigonospora | MHHNU9200 | OQ703790 | OQ703807 | China: Sichuan | Present study |
C. trigonospora | MHHNU10198 | OQ703791 | OQ703808 | China: Gansu | Present study |
C. tropicalis | MHHNU10721 | OQ703792 | OQ703809 | China: Hainan | Present study |
C. tropicalis | MHHNU10722 | OQ703793 | OQ703810 | China: Hainan | Present study |
C. umbrinella | HFRG_EJ191214_3_FRDBI 17588114 | OQ133539 | OQ133591 | United Kingdom: Hampshire | Unpublished |
Ramariopsis laeticolor | CR12764 | — | GU299509 | Slovakia | Unpublished |
R. laeticolor | UBC F23885 | KJ146701 | — | Canada: British Columbia Area | Unpublished |
Mucronella flava | IO.16.84 | MT232354 | MT232307 | Sweden | Olariaga et al. [29]; Yan et al. [30] |
Mucronella sp. | PDD95742 | HQ533013 | — | New Zealand | Yan et al. [30,31] |
3. Results
3.1. Taxonomy
3.2. Molecular Phylogenetic Analysis
4. Discussion
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
Appendix A
1. Basidiomata branched | C. corniculata |
1. Basidiomata unbranched | 2 |
2. Basidiospores spinous | C. helvola |
2. Basidiospores smooth | 3 |
3. Basidiospores subtriangular to ellipsoid | C. trigonospora |
3. Basidiospores globose, subglobose or ellipsoid | 4 |
4. Basidia and hyphae with a very small clamp connection | C. bispora |
4. Basidia and hyphae with a normal size clamp connection | 5 |
5. Basidiomata bicolored | C. bicolor |
5. Basidiomata monochromatic | 6 |
6. Basidiomata red or pinkish | 7 |
6. Basidiomata white, yellowish or orange | 11 |
7. Basidiomata pinkish | C. incarnata |
7. Basidiomata red | 8 |
8. Basidia two or four tapered sterigmata | C. erubescens |
8. Basidia invariably four tapered sterigmata | 9 |
9. Basidiospores globose to subglobose | C. sulcata |
9. Basidiospores ellipsoid, fusiform or amygdaliform | 10 |
10. Basidiomata 15–35 mm tall, basidiospores broadly ellipsoid to ellipsoid | C. tropicalis |
10. Basidiomata mostly 60–90 mm tall, basidiospores rather fusiform or amygdaliform | C. corallinorosacea |
11. Basidiomata white or cream color | 12 |
11. Basidiomata yellowish or orange | 13 |
12. Basidiospores broadly pip-shaped, the wall slightly thickened | C. brevipes |
12. Basidiospores subglobose, thin-walled | C. spiralis |
13. Basidiomata orange, orange-red or salmon-orange | 14 |
13. Basidiomata yellowish | 15 |
14. Basidiomata 15–30 mm tall, basidiospores globose, rarely subglobose | C. aurantiaca |
14. Basidiomata 15–70mm tall, basidiospores subglobose | C. aurantiocinnabarina |
15. Distributed in the tropics | C. amoena |
15. Distributed in the temperate and subtropics | 16 |
16. Basidiospore hilar appendix not prominent (<1 μm) | C. luteoalba |
16. Basidiospore hilar appendix very prominent (>1 μm) | 17 |
17. Tramal hyphae somewhat thick-walled (up to 1 μm) | C. laeticolor |
17. Tramal hyphae thin-walled | 18 |
18. Basidiomata 50–140 mm tall, densely fasciculate | C. fusiformis |
18. Basidiomata 15–50 mm tall, solitary or scattered to gregarious | C. aspersa |
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Yan, J.; Wen, J.; Li, G.-W.; Wu, S.-W.; Zhang, P. Taxonomy and Phylogenetic Relationships of Clavulinopsis (Clavariaceae, Agaricales): Description of Six New Species and One Newly Recorded Species from China. J. Fungi 2023, 9, 656. https://doi.org/10.3390/jof9060656
Yan J, Wen J, Li G-W, Wu S-W, Zhang P. Taxonomy and Phylogenetic Relationships of Clavulinopsis (Clavariaceae, Agaricales): Description of Six New Species and One Newly Recorded Species from China. Journal of Fungi. 2023; 9(6):656. https://doi.org/10.3390/jof9060656
Chicago/Turabian StyleYan, Jun, Jing Wen, Gui-Wu Li, Shao-Wu Wu, and Ping Zhang. 2023. "Taxonomy and Phylogenetic Relationships of Clavulinopsis (Clavariaceae, Agaricales): Description of Six New Species and One Newly Recorded Species from China" Journal of Fungi 9, no. 6: 656. https://doi.org/10.3390/jof9060656
APA StyleYan, J., Wen, J., Li, G.-W., Wu, S.-W., & Zhang, P. (2023). Taxonomy and Phylogenetic Relationships of Clavulinopsis (Clavariaceae, Agaricales): Description of Six New Species and One Newly Recorded Species from China. Journal of Fungi, 9(6), 656. https://doi.org/10.3390/jof9060656