Characterization of a Very Short Meq Protein Isoform in a Marek’s Disease Virus Strain in Japan
Abstract
:Simple Summary
Abstract
1. Introduction
2. Materials and Methods
2.1. Background of the Specimen
2.2. Polymerase Chain Reaction (PCR) and DNA Sequencing
2.3. Construction of Expression Plasmids
2.4. Cell Lines and Transfection
2.5. Dual-Luciferase Reporter Assay
2.6. Statistics
3. Results
3.1. Comparison of Amino Acid Sequences of Meq
3.2. Transrepression by VS-Meq on the pp38 Promoter
3.3. Transactivation by VS-Meq on the Meq and Bcl-2 Promoters
4. Discussion
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Conflicts of Interest
References
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Primer Name | Purpose | Sequence (5′-3′) |
---|---|---|
MS-10 | Sequencing | ATGTCTCAGGAGCCAGAGCCGGGCGCT |
M-AS | Sequencing | GGGGCATAGACGATGTGCTGCTGAG |
EcoRI Meq | Cloning into pCI-neo vector | CCCGAATTCATGTCTCAGGAGCCAGAGCCGGGCGCT |
Not I Meq | Cloning into pCI-neo vector | ATAAGAAATGGGGCCGCGGCGGGGCATAGACGATGTGCTGCTGAG |
E77K Fw | Mutagenesis | AGGAAGCAGACGTACTATGTAGACA |
E77K Rv | Mutagenesis | TGTCTACATAGTACGTCTGCTTCCTT |
Y80D Fw | Mutagenesis | AGAAGACGCAGGGAGCAGACGGACT |
Y80D Rv | Mutagenesis | AGTCCGTCTGCTCCCTGCGTCTTC |
E77K Y80D Fw | Mutagenesis | AGAAGACGCAGGAAGCAGACGGACT |
E77K Y80D Rv | Mutagenesis | AGTCCGTCTGCTTCCTGCGTCTTCT |
C114R A115V Fw | Mutagenesis | GAGTGCACGTCCCTGCGTGTACAGTTGGCTTGT |
C114R A115V Rv | Mutagenesis | TGACAAGCCAACTGTACACGCAGGGACGTGCACTC |
A176P Fw | Mutagenesis | ATCTGTACCCCCGCTCCTCCCGATA |
A176P Rv | Mutagenesis | TATCGGGAGGAGCGGGGGTACAGAT |
Strain | Isoform | Country | Accession No. | Length | Number of PPPP | ||
---|---|---|---|---|---|---|---|
ORF (bp) | Amino Acid (aa) | Deletion (aa) d | |||||
RB-1B | Meq | USA | EF523390 | 1020 | 339 | 0 | 5 |
CVI988 | S-Meq | Netherlands | AY243338 | 897 | 298 | 41 | 3 |
855/17 | S-Meq | Italy | MK139678 | 897 | 298 | 41 | 2 |
MDV/2/SA a | S-Meq | Saudi Arabia | LC385871 | 897 | 298 | 41 | 3 |
Iraq3A | S-Meq | Iraq | KC243262 | 897 | 298 | 41 | 2 |
Iraq10A | S-Meq | Iraq | KC243264 | 897 | 298 | 41 | 2 |
Iraq6F | S-Meq | Iraq | KC243263 | 897 | 298 | 41 | 2 |
99-26 | S-Meq | Iran | MZ962187 | 897 | 298 | 41 | 2 |
99-35 | VS-Meq | Iran | MW990216 | 798 | 265 | 74 | 1 |
VS-Meq b | VS-Meq | Japan | AB087744 | 744 | 247 | 92 | 1 |
Nr-c1 c | Meq | Japan | LC385871 | 1020 | 339 | 0 | 3 |
Kgw-c2 | S-Meq | Japan | CL385874 | 897 | 298 | 41 | 2 |
Sit-c1 | VS-Meq | Japan | BBE28998 | 828 | 275 | 64 | 1 |
Kc-c1 | VS-Meq | Japan | LC790435 | 828 | 275 | 64 | 1 |
Basic Region | Leucine Zipper | Transactivation Domain | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Strain | 36 | 70 | 71 | 77 | 78 | 80 | 88 | 100 | 110 | 114 | 115 | 119 | 141 | 168 | 176 * | 217 * | 218 * | 221 * | 281 * | 326 * |
RB-1B | S | A | A | K | Q | D | A | R | C | R | V | C | H | S | P | P | P | A | G | T |
CVI988 | S | A | A | E | Q | D | A | R | C | R | V | C | H | S | - | P | P | A | G | I |
855/17 | S | A | A | E | Q | Y | A | R | S | R | V | C | H | S | - | P | S | T | G | T |
MDV/2/SA | S | A | A | E | Q | Y | A | R | S | R | V | C | P | S | - | P | P | A | G | T |
Iraq3A | S | A | A | E | Q | Y | A | R | C | R | V | R | H | P | - | A | P | A | G | T |
Iraq10A | S | A | S | E | Q | D | A | R | C | R | V | C | H | P | - | A | P | A | G | T |
Iraq6F | S | A | S | E | Q | D | A | R | C | R | V | C | H | S | - | A | P | A | G | T |
99-26 | T | A | A | K | H | D | A | R | C | R | V | R | H | S | - | A | P | A | D | T |
99-35 | S | A | A | E | Q | Y | T | R | C | R | A | C | H | S | - | - | - | - | G | T |
VS-Meq | S | S | A | K | Q | D | A | H | C | R | V | C | H | S | - | - | - | - | G | T |
Nr-c1 | S | A | A | E | Q | Y | A | R | C | R | V | C | H | S | S | A | P | A | G | T |
Kgw-c2 | S | A | A | E | Q | Y | A | R | C | C | A | C | H | S | - | A | P | A | G | T |
Sit-c1 | S | A | A | E | Q | Y | A | R | C | R | V | C | H | S | - | - | - | - | G | T |
Kc-c1 | S | A | A | E | Q | Y | A | R | C | R | V | C | H | S | - | - | - | - | G | T |
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Motai, Y.; Murata, S.; Sato, J.; Nishi, A.; Maekawa, N.; Okagawa, T.; Konnai, S.; Ohashi, K. Characterization of a Very Short Meq Protein Isoform in a Marek’s Disease Virus Strain in Japan. Vet. Sci. 2024, 11, 43. https://doi.org/10.3390/vetsci11010043
Motai Y, Murata S, Sato J, Nishi A, Maekawa N, Okagawa T, Konnai S, Ohashi K. Characterization of a Very Short Meq Protein Isoform in a Marek’s Disease Virus Strain in Japan. Veterinary Sciences. 2024; 11(1):43. https://doi.org/10.3390/vetsci11010043
Chicago/Turabian StyleMotai, Yoshinosuke, Shiro Murata, Jumpei Sato, Akihito Nishi, Naoya Maekawa, Tomohiro Okagawa, Satoru Konnai, and Kazuhiko Ohashi. 2024. "Characterization of a Very Short Meq Protein Isoform in a Marek’s Disease Virus Strain in Japan" Veterinary Sciences 11, no. 1: 43. https://doi.org/10.3390/vetsci11010043
APA StyleMotai, Y., Murata, S., Sato, J., Nishi, A., Maekawa, N., Okagawa, T., Konnai, S., & Ohashi, K. (2024). Characterization of a Very Short Meq Protein Isoform in a Marek’s Disease Virus Strain in Japan. Veterinary Sciences, 11(1), 43. https://doi.org/10.3390/vetsci11010043