An Optimal Deep Hybrid Framework with Selective Kernel U-Net for Skin Lesion Detection and Classification
Abstract
1. Introduction
1.1. Research Motivation
1.2. Objective of the Study
1.3. Research Contribution
- Advanced Preprocessing: A combination of CLAHE and Wiener filtering of DIs is applied to enhance contrast, reduce noise, and provide uniform image quality.
- Precise Segmentation: SK-UNet is used to segment lesion areas, enabling precise boundary detection regardless of lesion shape or size.
- Rich Feature Extraction: A variety of complementary features are obtained, including color (RGB and HSV), texture (GLCM, LBP), and shape (roundness, saturation, dispersity), ensuring that the lesion is comprehensively represented.
- Optimized Feature Selection: FOA selects the most informative features, reduces redundancy, and enhances the classifier’s efficiency.
- Hybrid Classification Model: A hybrid 1D-CNNGRU model is developed to integrate spatial feature learning with sequential dependency modeling, resulting in robust multi-class classification performance.
1.4. Paper Organization
2. Literature Review
| Ref. No | Author Details | Techniques | Advantages | Disadvantages |
|---|---|---|---|---|
| [15] | Kyi Pyar Zaw and Atar Mon | VGG-16, ResNet 50, InceptionV3 | Faster, robust, and scalable for clinical use | May reduce accuracy, add complexity, and need more resources |
| [16] | Faheem Mazhar et al. | CNN, GWO | Fast, accurate, accessible, and reliable diagnosis. | High cost, data limits, and complexity. |
| [17] | Saima Ali Batool et al. | CNN | High accuracy, better recall, and effective early detection. | High computation needs and poor generalization on imbalanced data. |
| [18] | Eatedal Alabdulkreem et al. | GoogleNet, ResNet-18, and MobilNet-v2 | Higher accuracy and better early detection with preprocessing. | Computationally intensive and slower execution. |
| [19] | Sankarakutti Palanichamy Manikandan et al. | EDLCS | High accuracy with effective noise removal and color models. | Limited to binary classification and dataset dependency. |
| [20] | Muhammad Mateen et al. | Hybrid DL | Highly accurate, generalizable, reduces misdiagnosis, and app-friendly. | Complex, resource-heavy, dataset-dependent, and deployment challenges |
| [21] | Ahmad Naeem et al. | SNC_Net | Accurate, multi-class, balanced, and explainable. | Limited scope, complex, less generalizable, and incomplete |
| [25] | Ahmad Naeem et al. | Hybrid CNN and GWO | Reliable and fast melanoma diagnosis. | High computing demands and limited dataset testing |
| [26] | Khadija Nawaz et al. | FCDS-CNN | Accurate and dependable early detection of skin cancer | Requires significant computing resources and quality data. |
| [27] | Mohammed Alshahrani et al. | CNN models | Reliable and precise early skin cancer diagnosis | Computationally complex and resource-intensive |
3. Proposed Approach
3.1. Dataset Collection
- ISIC and DermMNIST datasets
3.2. Data Preprocessing
3.2.1. CLAHE
- ✓
- Set Clip Limit and Region Size: The process is initiated by setting the clip limit and region size for each region using the histogram shape. A histogram’s clip limit can be calculated using Equation (1):where is the highest grayscale value (256 for an 8-bit image), is the size of the region (tile) for which the histogram will be produced, is the maximum pixel value in the region, and is the clip factor (specified between 0 and 100), which controls the level of histogram clipping [30].
- ✓
- Histogram Clipping: Each tile’s histogram is clipped using the clip limit ( to make sure that no pixel intensity goes over the specified limit. This step stops noise from being amplified too much.
- ✓
- Excess Redistribution: A new histogram is created and applied to the relevant tile in the image by redistributing any excess from the clipped histogram—that is, the pixel values that surpass the limit—across the region.
- ✓
- Final Image Construction: The final image is produced by smoothing down the borders, enhancing the local contrast, and interpolating pixel values from nearby regions [31].
3.2.2. Wiener Filter
3.2.3. Image Resizing
3.3. Segmentation Using SK-UNet
- ➢
- Squeeze-And-Excitation Residual (SE-Res) Module
- ➢
- Selective Kernel (SK) Module
3.4. Feature Extraction
3.4.1. Color Features Using RGB and HSV
- ✓
- RGB
- ✓
- HSV
3.4.2. Texture Feature Using GLCM and LBP
- ✓
- GLCM
- ✓
- Local Binary Pattern (LBP)
3.4.3. Shape Feature Using Dispersion, Saturation, and Roundness
- ✓
- Dispersion measures the spread of pixels in a region, calculated as the ratio of the lesion area to the square of its perimeter. The following is the dispersion calculation:
- ✓
- Convexity (or saturation) measures how closely a region’s shape resembles a convex form, calculated as the ratio of its area to perimeter. The following formula is used to determine saturation (or convexity):
- ✓
- Circularity (or roundness) indicates the degree to which a region resembles a circle [37]. The following is the circularity calculation:
3.5. Feature Selection Using FOA
- ✓
- Initialization
- ✓
- Fitness Function
- ✓
- Mathematical modeling for FOA
- Exploration Phase:
- 2.
- Exploitation Phase:
- ✓
- Attacking and moving towards the lemur
- ✓
- Chasing to catch a lemur
- ✓
- Termination
3.6. Classification Using Hybrid 1D-CNN-GRU
- ✓
- Input Layer:
- ✓
- 1D-CNN Layer
- ✓
- Batchnorm Layer
- ✓
- GRU layer
- ✓
- Fully Connected Layer and Softmax Classifier
- ✓
- Output Layer

| Algorithm 1: Proposed SK-UNet + FOA + Hybrid 1D-CNN–GRU Framework |
| Input: Dermoscopic images from ISIC and DermMNIST datasets Output: Classified skin lesion type Step 1: Acquire dermoscopic images from benchmark datasets. Step 2: Apply preprocessing using: (a) CLAHE for contrast enhancement (b) Wiener filtering for noise reduction (c) Image resizing to 224 × 224 Step 3: Segment lesion regions using SK-UNet. Step 4: Extract features from segmented lesions: (a) Color features (RGB, HSV) (b) Texture features (GLCM, LBP) (c) Shape features (dispersion, saturation, roundness) Step 5: Apply FOA to select optimal features. Step 6: Feed selected features into the hybrid 1D-CNN–GRU classifier. Step 7: Perform classification using softmax activation. Step 8: Evaluate performance using accuracy, precision, recall, F1-score, and AUC. |
4. Results
4.1. Evaluation of the Proposed Hybrid DL Classifier
- ➢
- Proposed Feature Importance (FOA)
- ➢
- t-SNE and PCA feature visualization for both datasets
- ➢
- Confusion Matrix for both datasets
- ➢
- Performance Evaluation of the Proposed Hybrid DL Classifier on ISIC and DermMNIST Datasets
- ➢
- Training and Validation Accuracy and Loss for both datasets
- ➢
- Proposed performance metrics per class for both datasets
- ➢
- Proposed ROC per class for both datasets
- ➢
- Proposed PR curve per class for both datasets
4.2. Comparative Analysis for the Proposed Hybrid DL Model for Both Datasets
- ➢
- For the ISIC and DermMNIST datasets
5. Discussion
6. Conclusions
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
Abbreviations
| SC | Skin cancer |
| DL | Deep learning |
| CLAHE | Contrast Limited Adaptive Histogram Equalization |
| SK-UNet | Selective Kernel U-Net |
| FOA | Fossa Optimization Algorithm |
| 1D CNN | One-dimensional Convolutional Neural Network |
| GRU | Gated Recurrent Unit |
| CNN | Convolutional Neural Network |
| BCC | basal cell carcinoma |
| SCC | squamous cell carcinoma |
| MEL | melanoma |
| AK | Actinic Keratosis |
| BKL | Benign Keratosis |
| DF | Dermatofibroma |
| NV | Nevus |
| PBK | Pigmented Benign Keratosis |
| SK | Seborrheic Keratosis |
| VASC | Vascular Lesion |
| AI | Artificial Intelligence |
| ML | machine learning |
| XAI | Explainable Artificial Intelligence |
| ROI | Region of Interest |
| SCD | Skin cancer Detection |
| GWO | Gray Wolf optimization |
| RF | Random Forest |
| SE Res | Squeeze-And-Excitation Residual |
| BN | batch normalization |
| ReLU | rectified linear unit |
| LBP | Local Binary Pattern |
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| Performance Metrics | Proposed | |
|---|---|---|
| ISIC Dataset | DermMNIST Dataset | |
| Accuracy | 97.6% | 95.6% |
| Precision | 97.2% | 95.1% |
| Recall | 97% | 94.8% |
| F-Measure | 97.1% | 94.9% |
| AUC | 98.5% | 96.8% |
| Feature Selection | ISIC Accuracy (%) | DermMNIST Accuracy (%) | ISIC F1-Score (%) | DermMNIST F1-Score (%) |
|---|---|---|---|---|
| PCA | 94.1 | 91.8 | 93.7 | 91.4 |
| LASSO | 95.0 | 92.6 | 94.8 | 92.4 |
| GA | 96.1 | 93.9 | 95.9 | 93.5 |
| PSO | 96.4 | 94.2 | 96.2 | 94.0 |
| FOA (Proposed) | 97.6 | 95.6 | 97.1 | 94.9 |
| Metrics | Dataset | SVM | CNN | ResNet | MobiliNetV2 | Proposed |
|---|---|---|---|---|---|---|
| Accuracy | ISIC | 86.4% | 91.2% | 94.5% | 92.8% | 97.6% |
| Derm-MNIST | 81.2% | 87.6% | 91.2% | 89.4% | 95.6% | |
| Precision | ISIC | 85.2% | 90.8% | 94.2% | 92.1% | 97.2% |
| Derm-MNIST | 80.5% | 87% | 90.7% | 88.8% | 95.1% | |
| Recall | ISIC | 84.7% | 90.1% | 93.9% | 91.6% | 97% |
| Derm-MNIST | 79.8% | 86.4% | 90.2% | 88.2% | 94.8% | |
| F1-Score | ISIC | 85% | 90.4% | 94% | 91.8% | 97.1% |
| Derm-MNIST | 80.1% | 86.7% | 90.4% | 88.5% | 94.9% | |
| AUC | ISIC | 88.1% | 92.7% | 95.6% | 94.2% | 98.5% |
| Derm-MNIST | 83.5% | 88.9% | 92.5% | 91.2% | 96.8% |
| Ref. No | Techniques | Dataset | Accuracy (%) | Precision (%) | Recall (%) | F1-Score (%) | AUC (%) |
|---|---|---|---|---|---|---|---|
| [16] | CNN, GWO | HAM10000 | 95.11% | 94.56% | 93.88% | 96.16% | - |
| [17] | CNN | HAM10000 | 97.4% | - | - | - | - |
| [26] | FCDS-CNN | melanoma dataset | 96.66% | 96% | 96% | 97% | 96% |
| [43] | Intelligent Multilevel Thresholding with DL | ISIC | 76.8% | 69.3% | 55.7% | 60.6% | - |
| [44] | DenseNet-201+ Lasso+ Ensemble learning | ISIC | 87.72% | - | 92.15% | - | - |
| Proposed | SK-UNet + Fossa OA + Hybrid 1D-CNN-GRU | ISIC | 97.6% | 97.2% | 97% | 97.1% | 98.5% |
| DermMNIST | 95.6% | 95.1% | 94.8% | 94.9% | 96.8% |
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Gulmirzaeva, G.; Hudec, R.; Akbaraliev, B.; Samandarov, B. An Optimal Deep Hybrid Framework with Selective Kernel U-Net for Skin Lesion Detection and Classification. Bioengineering 2026, 13, 427. https://doi.org/10.3390/bioengineering13040427
Gulmirzaeva G, Hudec R, Akbaraliev B, Samandarov B. An Optimal Deep Hybrid Framework with Selective Kernel U-Net for Skin Lesion Detection and Classification. Bioengineering. 2026; 13(4):427. https://doi.org/10.3390/bioengineering13040427
Chicago/Turabian StyleGulmirzaeva, Guzal, Robert Hudec, Baxtiyorjon Akbaraliev, and Batirbek Samandarov. 2026. "An Optimal Deep Hybrid Framework with Selective Kernel U-Net for Skin Lesion Detection and Classification" Bioengineering 13, no. 4: 427. https://doi.org/10.3390/bioengineering13040427
APA StyleGulmirzaeva, G., Hudec, R., Akbaraliev, B., & Samandarov, B. (2026). An Optimal Deep Hybrid Framework with Selective Kernel U-Net for Skin Lesion Detection and Classification. Bioengineering, 13(4), 427. https://doi.org/10.3390/bioengineering13040427

