2.1. Analytical Techniques, Reagents, and Equipment
The COD was determined using the small-scale sealed tube method [
20]. The reagents used were concentrated sulfuric acid (96–98%) CTR brand (CTR Scientific Monterrey, Nuevo León, México), potassium dichromate (96–98%) FERMONT brand (Productos Químicos Monterrey Monterrey, Nuevo León, México), mercury sulfate (>98%) Jalmek brand (Jalmek Científica, S.A. de C.V. San Nicolás de los Garza, Nuevo León, México), silver sulfate (>98%) Jalmek brand (Jalmek Científica, S.A. de C.V. San Nicolás de los Garza, Nuevo León, México), and potassium dichromate (96–98%). The equipment used was a HACH Model Digital Reactor Block 200 thermoreactor (HACH, Loveland, CO, USA) and a HACH Model DR 5000 spectrophotometer (HACH, Loveland, CO, USA).
The OCV was determined by the electrometric method [
21]. No reagents were used. The equipment used was graphite rods, graphite felt electrodes, and a STEREN PC LINK brand multimeter (Electrónica Steren S.A de C.V. Azcapotzalco, Mexico City, México).
The pH was determined by the electrometric method [
22]. The reagents used were Thermo Scientific Buffer pH 4.01 Orion application solution 910104 (Thermo Fisher Orion, Waltham, MA, USA), Thermo Scientific Buffer pH 7.00 Orion application solution 910107 (Thermo Fisher Orion, Waltham, MA, USA), and Thermo Scientific Buffer pH 10.01 Orion application solution 910110 (Thermo Fisher Orion, Waltham, MA, USA). The equipment used was a Thermo Scientific Orion Star A215 pH/Conductivity meter with an Orion ROSS Combination pH 8102BN electrode (Thermo Fisher Orion, Waltham, MA, USA).
The ORP was determined by the electrometric method [
23]. The reagent used was ORP Standard (420 mV), Orion application solution 967901 (Thermo Fisher Orion, Waltham, MA, USA). The equipment used was a Thermo Scientific Orion Star A215 pH/Conductivity meter with an Orion Sure-Flow Comb Redox/ORP electrode 9678BNWP (Thermo Fisher Orion, Waltham, MA, USA).
The EC was determined by the electrometric method [
24]. The reagents used were Thermo Scientific Conductivity/TDS Standard (100 µS/cm–47 ppm as NaCl), Orion application solution 011008 (Thermo Fisher Orion, Waltham, MA, USA), and Thermo Scientific Conductivity/TDS Standard (1413 µS/cm–692 ppm as NaCl), Orion application solution 011007 (Thermo Fisher Orion, Waltham, MA, USA). The equipment used was a Thermo Scientific Orion Star A215 pH/Conductivity meter with an Orion Conductivity Cell 013005MD electrode (Thermo Fisher Orion, Waltham, MA, USA).
The TSs were determined by the gravimetric method by evaporation [
25]. The equipment used was an ARSA brand drying oven (model AR-290) (Proquisur Milpa Alpa, Mexico City, México) and a Joanlab brand analytical balance (model FA3304N) (JoanLab Equipment Co., Huzhou, China).
The TSSs were determined by the gravimetric method by filtration and evaporation [
25]. The equipment used was AHLSTROM MUNKSJO brand glass microfiber filters (Ahlstrom Munksjö Helsinki, Uusimaa, Finland), a Millipore brand vacuum pump (model WP6111560), an ARSA brand drying oven (model AR-290) (Proquisur Milpa Alpa, Mexico City, México), and a Joanlab brand analytical balance (model FA3304N) (JoanLab Equipment Co., Huzhou, China).
The TDSs were determined by the gravimetric method by evaporation [
25]. The equipment used was an ARSA brand drying oven (model AR-290) (Proquisur Milpa Alpa, Mexico City, México) and a Joanlab brand analytical balance (model FA3304N) (JoanLab Equipment Co., Huzhou, China).
The F&Os were determined by the Soxhlet method [
26]. The reagents used were concentrated sulfuric acid (96–98%) CTR brand (CTR Scientific Monterrey, Nuevo León, México), diatomaceous earth MAESA brand (Materiales y Abastos Especializados, S.A. de C.V. Benito Juárez, Mexico City, México), and n-hexane (>65%) Jalmek brand (Jalmek Científica, S.A. de C.V. San Nicolás de los Garza, Nuevo León México), and the equipment used was a Soxhlet distillation system (Chemglass Life Sciences, Vineland, NJ, USA), Whatman brand cellulose cartridges for extraction 33 × 80 mm (Whatman plc, Marlborough, MA, USA), a Corning brand magnetic stirring/heating plate (model PC320) (Corning Inc., Corning, NY, USA), a KAMOER brand peristaltic pump (model KGHM100) (Kamoer Fluid Tech Distrito Songjiang, Shanghai, China), an ARSA brand drying oven (model AR-290) (Proquisur Milpa Alpa, Mexico City, México), and a Joanlab brand analytical balance (model FA3304N) (JoanLab Equipment Co., Huzhou, China).
P was determined by the vanadomolybdophosphoric acid method [
27]. The reagents used were phenolphthalein Hycel brand (Hycel de México, S.A. de C.V. Zapopan, Jalisco, México), ethyl alcohol (96%) Jalmek brand (Jalmek Científica, S.A. de C.V. San Nicolás de los Garza, Nuevo León México), concentrated sulfuric acid (96–98%) CTR brand (CTR Scientific Monterrey, Nuevo León, México), concentrated nitric acid (64–66%) Jalmek brand (Jalmek Científica, S.A. de C.V. San Nicolás de los Garza, Nuevo León, México), ammonium heptamolybdate heptahydrate (>81%) CTR brand (CTR Scientific Monterrey, Nuevo León, México), ammonium metavanadate (>99%) Jalmek brand (Jalmek Científica, S.A. de C.V. San Nicolás de los Garza, Nuevo León, México), and concentrated hydrochloric acid (36–38%) Jalmek brand (Jalmek Científica, S.A. de C.V. San Nicolás de los Garza, Nuevo León, México). The equipment used was a Corning PC320 magnetic stirrer/heating plate (Corning Inc., Corning, NY, USA) and a HACH DR 5000 spectrophotometer (HACH, Loveland, CO, USA).
The TN was determined by adding the following parameters: Nitrates were determined by the chromotropic acid method [
28]. The reagents used were sulfamic acid (>99%) Mallinckrodt Chemicals brand (Mallinckrodt Pharmaceuticals, St. Louis, MO, USA), chromotropic acid (>99%) Sigma-Aldrich brand (Sigma-Aldrich, Corporation St. Louis, MO, USA), and concentrated sulfuric acid (96–98%) CTR brand (CTR Scientific Monterrey, Nuevo León, México), and the equipment used was a HACH brand spectrophotometer (model DR 5000) (HACH, Loveland, CO, USA). Nitrites were determined by the colorimetric method with sulfanilamide and NEDA [
29]. The reagents used were sodium hydroxide (>97%) FERMONT brand (Productos Químicos Monterrey Monterrey, Nuevo León, México), concentrated sulfuric acid (96–98%) CTR brand (CTR Scientific Monterrey, Nuevo León, México), and sulfanilamide (>99%) Sigma-Aldrich brand (Sigma-Aldrich Corporation, St. Louis, MO, USA), and the equipment used was a HACH brand spectrophotometer (model DR 5000) (HACH, Loveland, CO, USA). Ammoniacal nitrogen and organic nitrogen were determined by the Kjeldahl method [
30]. The reagents used were sodium hydroxide (>97%) FERMONT brand (Productos Químicos Monterrey Monterrey, Nuevo León, México), sodium tetraborate decahydrate (>95%) Jalmek brand (Jalmek Científica, S.A. de C.V. San Nicolás de los Garza, Nuevo León, México),, boric acid (>99%) Jalmek brand (Jalmek Científica, S.A. de C.V. San Nicolás de los Garza, Nuevo León, México), methyl red DEQ brand (Desarrollo de Especialidades Químicas, S.A. de C.V. García, Nuevo León, México), methylene blue Jalmek brand (Jalmek Científica, S.A. de C.V. San Nicolás de los Garza, Nuevo León, México), ethyl alcohol (96%) Jalmek brand (Jalmek Científica, S.A. de C.V. San Nicolás de los Garza, Nuevo León, México), potassium sulfate (>99%) Jalmek brand (Jalmek Científica, S.A. de C.V. San Nicolás de los Garza, Nuevo León, México), anhydrous copper sulfate (>98%) Jalmek brand (Jalmek Científica, S.A. de C.V. San Nicolás de los Garza, Nuevo León, México), concentrated sulfuric acid (96–98%) CTR brand (CTR Scientific Monterrey, Nuevo León, México), and sodium thiosulfate pentahydrate (>99%) FERMONT brand (Productos Químicos Monterrey Monterrey, Nuevo León, México). The equipment used was a LABCONCO brand micro Kjeldahl digester (Labconco Corporation, Kansas City, MO, USA), a distillation system, a KAMOER brand peristaltic pump (model KGHM100) (Kamoer Fluid Tech Distrito Songjiang, Shanghai, China), and a Corning brand magnetic stirrer/heating plate (model PC320) (Corning Inc., Corning, NY, USA).
The BOD was determined by the seed dilution method [
31] and dissolved oxygen measurement [
32]. The reagents used were magnesium sulfate heptahydrate (>98%) FERMONT brand (Productos Químicos Monterrey Monterrey, Nuevo León, México), anhydrous calcium chloride (>96%) CTR brand (CTR Scientific Monterrey, Nuevo León, México), ferric chloride hexahydrate (>97%) Karal brand (Karal, S.A. de C.V. León, Guanajuato, México), potassium phosphate monobasic (>99%) Analytyka brand (Analytyka reactivos y materias primas especiales Guadalajara, Jalisco, México), potassium phosphate dibasic (>98%) PQM brand (Productos Químicos Monterrey Monterrey, Nuevo León, México), sodium phosphate dibasic heptahydrate (>99%) Baker´s Analyzed brand (Avantor, Inc., Radnor, PA, USA), ammonium chloride (>99%) FERMONT brand (Productos Químicos Monterrey Monterrey, Nuevo León, México), manganese sulfate monohydrate (>98%) Jalmek brand (Jalmek Científica, S.A. de C.V. San Nicolás de los Garza, Nuevo León, México), sodium hydroxide (>97%) FERMONT brand (Productos Químicos Monterrey Monterrey, Nuevo León, México), potassium hydroxide (>98%) MAESA brand (Materiales y Abastos Especializados, S.A. de C.V. Benito Juárez, Mexico City, México), potassium iodide (>99%) Jalmek brand (Jalmek Científica, S.A. de C.V. San Nicolás de los Garza, Nuevo León, México), sodium azide (>98%) CTR brand (CTR Scientific Monterrey, Nuevo León, México), soluble starch (98%) Hycel brand (Hycel de México, S.A. de C.V. Zapopan, Jalisco, México), salicylic acid (>99%) FERMONT brand (Productos Químicos Monterrey Monterrey, Nuevo León, México), sodium thiosulfate (>99%) FERMONT brand (Productos Químicos Monterrey Monterrey, Nuevo León, México), and concentrated sulfuric acid (96–98%) FERMONT brand (Productos Químicos Monterrey Monterrey, Nuevo León, México). The equipment used was a Corning brand magnetic stirrer/heating plate model PC320 (Corning Inc., Corning, NY, USA), and a HACH brand BOD incubator, model 205 (HACH, Loveland, CO, USA).
The FCs were determined by the serial dilution method [
33]. The reagents used were sodium lauryl sulfate broth BD brand (Becton, Dickinson and Company, Franklin Lakes, NJ, USA) and EC broth BD brand (Becton, Dickinson and Company, Franklin Lakes, NJ, USA). The equipment used was a Corning brand magnetic stirrer/heater, model PC320 (Corning Inc., Corning, NY, USA), an ALL AMERICAN brand electric pressure sterilizer, model 1930 (Wisconsin Aluminum Foundry Co., Inc. Manitowoc, WI, USA), a SCILOGEX brand vortex stirrer, model MX-S (Scilogex, LLC, Rocky Hill, CT, USA), and an ARSA brand drying oven, model AR-290 (Proquisur Milpa Alpa, Mexico City, México).
The HEs were determined by the modified Bailenger method [
34]. The reagents used were Triton X-100 Hycel brand (Hycel de México, S.A. de C.V. Zapopan, Jalisco, México), sodium acetate trihydrate (>99%) Jalmek brand (Jalmek Científica, S.A. de C.V. San Nicolás de los Garza, Nuevo León, México), glacial acetic acid (>99%) Jalmek brand (Jalmek Científica, S.A. de C.V. San Nicolás de los Garza, Nuevo León, México), ethyl ether (>99%) Jalmek brand (Jalmek Científica, S.A. de C.V. San Nicolás de los Garza, Nuevo León, México), and zinc sulfate heptahydrate (>99%) Jalmek brand (Jalmek Científica, S.A. de C.V. San Nicolás de los Garza, Nuevo León, México). The equipment used was an IEC HN-SII model BM1000 centrifuge (Thermo Fisher Scientific, Needham Heights, MA, USA), a SCILOGEX model MX-S vortex mixer (Scilogex, LLC, Rocky Hill, CT, USA), a McMaster chamber (Carl Roth GmbH + Co. KG Karlsruhe, BW, Germany), and a Prisma model 208 optical microscope (Ingeniería Científica Bionanomolecular, S.A. de C.V., Guadalajara, Jalisco, México).
2.3. Description and Operation of ML-MFC
The ML-MFC was constructed using transparent acrylic and 3D-printed polylactic acid (PLA) parts, with a working volume of 3.7 L, comprising 1.85 L for the anode and 1.85 L for the cathode. The anode and cathode were separated by a 3D-printed piece with a mesh center, its main function being to contain 430 g of 10 mm diameter ceramic clay (ceramsite). The top and bottom lids, as well as the reactor centerpiece, were also 3D-printed with PLA.
The electrodes for both the anode and cathode consisted of graphite felt, which served as an electron collector (electrical energy) and as a support for the microorganisms. The graphite felt used was 6 mm thick and was cut into 8.5 cm diameter pieces. These pieces, in turn, contained 10 perforations, each 5 mm in diameter, along the surface to improve water flow. Six stacked pieces of graphite felt were used for both the anode and cathode. The stacked graphite felt piece package (anode) was introduced into a solution of MWW and sludge from a municipal wastewater treatment plant (90% MWW—10% sludge), and the corresponding cathode package was immersed in a solution with MWW and the same type of sludge (90% MWW—10% sludge), and aeration was provided (ELITE brand, model 799) for 15 d, which served to promote the formation of microbial biofilms on both electrodes. At the end of this period, the ML-MFC was assembled for operation in continuous flow. The anode and cathode electrodes were in contact with two pieces of graphite rod, 5 cm long by 5 mm wide, to serve as terminals to measure the OCV. The assembled ML-MFC is shown in
Figure 1.
The ML-MFC was fed by a Watson-Marlow Limited 101U/R peristaltic pump, which was configured to provide HRTs of 48, 36, 24, and 12 h in each experiment. The MWW moved to the anode located at the bottom, and then the water continued its course toward the cathode situated at the top of the ML-MFC. The air flow to the cathode was administered through an aerator pump (ELITE brand, model 799) at a flow rate of 2 L/min, which entered the system through a silicone hose coupled to a circular diffuser with a diameter of 3.5 cm, a thickness of 1.7 cm, and 217 holes of 1 mm for air outlet, which was 3D-printed with PLA. Each HRT was studied for 168 continuous h (7 d). Parameters such as COD, OCV, pH, ORP, and EC were monitored in the effluent starting at 48 h and then every 24 h thereafter. Parameters such as TSs, TSSs, TDSs, F&Os, P, TN, BOD, FCs, and HEs were measured at the end of 168 h for each HRT.
2.4. Molecular Characterization of Microorganisms on ML-MFC Anode
The sample taken from the anode was homogenized using a SCILOGEX MX-S brand vortex stirrer. Subsequently, 1 mL of the sample was taken, and serial dilutions were made up to 1 × 10
−5. From each dilution, 100 μL was seeded on LB agar medium plates (Sigma Aldrich, Cat. L3147, Saint Louis, MO, USA), and the plates were incubated for 48 h at 27 °C. From the resulting colonies, six were selected based on their distinct separation from the others. Genomic DNA was extracted from the resulting colonies using the HotShot method [
35]. Briefly, the selected colonies were picked with sterile toothpicks and dissolved in 50 μL of an alkaline lysis solution (25 mM NaOH and 0.2 mM Na2EDTA) in a 0.2 mL sterile microtube and incubated at 95 °C in a thermocycler (Maxigene II, Axygen, Corning Life Sciences, Union City, CA, USA) for one hour. Then, 50 μL of a neutralization solution (40 mM Tris-HCl) was added, and the resulting solution was stored at −20 °C.
Subsequently, a 2 μL sample of each solution was taken to carry out the amplification of the 16S ribosomal fragment, using the commercial GoTaq Green Master Mix kit (Promega Corporation, Madison, WI, USA) and the previously documented universal primers 27F (5′-AGAGTTTGATCCTGGCTCAG-3′) and 1429R (5′-GTTTACCTTGTTACGACTT-3′) [
36]. The PCR products were subjected to agarose gel electrophoresis (1%, TAE1X, 80V), and the resulting products were purified using the Wizard SV Gel and PCR Clean-Up System commercial kit (Promega Corporation, Madison, WI, USA).
The purified products were verified by agarose gel electrophoresis (1%, TAE1X, 80 V), quantified (GelAnalyzer v19.1), and sent for bidirectional sequencing, using the primers 27F and 1429R in each sample, to the Genomic Services Laboratory (Labsergene-Langebio, CINVESTAV, Irapuato, Mexico), following the specifications of the service provider.
The obtained sequences were visualized and manipulated using the SnapGene v8.1.1 program. The bidirectional sequences of each sample were aligned using the MAFFT program. Each alignment was exported in FASTA format and used to obtain the consensus sequence with the EMBOSS Cons program (
https://www.ebi.ac.uk/jdispatcher/msa/emboss_cons?stype, accessed on 1 July 2025). The consensus sequence was then used to perform alignment with the BLAST tool (
https://blast.ncbi.nlm.nih.gov/, accessed on 1 July 2025). The criteria for species validation were considered to be that the identity percentage was greater than 98% and from 95% for genus validation [
37].