Predicting Male Infertility Using Artificial Neural Networks: A Review of the Literature
Abstract
:1. Introduction
2. Materials and Methods
2.1. Inclusion Criteria
- -
- Inclusion: Studies published in a peer-reviewed journal; any year of publication; all study designs; human male population.
- -
- Exclusion: Any language other than English; grey literature, letter to the editor, or reviews; search results with content not directly relevant to the research question after; undergoing a title and abstract screening; studies with different target populations (female, animals); articles with ambiguity in the context of male infertility in humans and machine learning; paper with no direct access to the full text.
2.2. Quality of the Studies and Risk of Bias Analysis
3. Results
3.1. Retrospective and Prospective Studies
3.2. Observational Studies
3.3. Multivariable Prediction Model Studies
4. Discussion
5. Conclusions
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Conflicts of Interest
Abbreviations
Abbreviations | Description |
AAA | Artificial Algae Algorithm |
AdaBoost | Adaptive Boosting |
ANN | Artificial Neural Network |
ANNs | Artificial Neural Networks |
BKMR | Bayesian Kernel Machine Regression |
Boruta | Boruta is a features selection algorithm |
BPNN | Backpropagation Neural Networks |
CatBoost | It is an open-source gradient-boosting library |
CNN | Convolutional Neural Network |
Data mining | It is a model designed to extract the rules from large quantities of data? |
DL | Deep Learning |
DMTL | Deep Multi-Task Learning |
DNN | Deep Neural Network |
DPPCG | Deep Learning Computational Modeling Alternative |
DT | Decision Tree |
DTLA | Design Thinking Learning Approach |
FSNN | Feedback System Neural Network |
GBT | Gradient Boosting Technique |
GFLASSO | Least Absolute Shrinkage and Selection Operator |
GFLASSO | Graph-Guided Fused Least Absolute Shrinkage and Selection Operator |
GLM | Generalized Linear Model |
GP | Gaussian Process |
INK | Simple instance-based learner that uses the class of the nearest k training instances for the class of the test instances |
J48 | Also known as the c4.5 algorithm, it examines the data categorically and continuously |
KNN | K-Nearest Neighbors |
Kstar | Instance-Based Classifier Algorithm |
LDA | Linear Discriminant Analysis |
LDFA | Linear Discriminant Function Analysis |
LR | Linear Regression |
ML | Machine Learning |
MLP | Multi-Layer Perceptron |
MvLRM | Multivariate Logistic Regression Model |
NB | Naïve Bayes |
NNET | Non-Linear Method of Neural Computation |
Appendix A
Target | Mesh | Tiab | Synonym |
---|---|---|---|
Man Infertility | “Infertility, Male” | “male infertil*” [OR] “male fertil*” |
“Male factor infertility” OR
“Male reproductive*” OR “Male subfertility” |
Artificial Neural networks | “Neural Networks, computer” | “artificial neural network*” |
“Neural computation” OR
“Neural architectures” OR “Neural algorithms” OR “machine learning” OR “neural models” |
Prediction | “Prognosis” | “predict*” |
“Forecasting” OR “Estimating”
OR “Prognosticating” OR “Calculating” |
Database | String | Output |
---|---|---|
Pubmed | (“Infertility, Male”[Mesh] OR “male infertil*”[tiab] OR “male fertil*”[tiab] OR “Male factor infertility” OR “Male reproductive*”[tiab] OR “Male subfertility”) AND (“Neural Networks, computer”[Mesh] OR “artificial neural network*”[tiab] OR “Neural computation” OR “Neural architectures” OR “Neural algorithms” OR “Machine learning” OR “neural models”) AND (predict*[tiab] OR “Prognosis”[Mesh] OR “Forecasting” OR “Estimating” OR “Prognosticating” OR “Calculating”) | 44 |
ScienceDirect | (“Infertility, Male” OR “male infertil*” OR “male fertil*” OR “Male factor infertility” OR “Male reproductive*”OR “Male subfertility”) AND (“Neural Networks, computer” OR “artificial neural network*” OR “Neural computation” OR “Neural architectures” OR “Neural algorithms” OR “Machine learning” OR “neural models”) AND (predict* OR “Prognosis” OR “Forecasting” OR “Estimating” OR “Prognosticating” OR “Calculating”) | 49 |
Scopus | (“male infertility” OR “male fertility”) AND (“artificial neural network” OR “machine learning” OR “predictive model” OR “neural network”) AND “accuracy”. | 161 |
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Acronym | Definition | Motivation | Research Question |
---|---|---|---|
P | Population | Gain insights about the predictive tools using ML for Male infertility | Are there any models that predict male infertility? |
I | Intervention | Analyze state of the art of the different ML and ANN algorithms used to predict male infertility | Which computational models have been used to predict Male infertility? |
C | Comparison | Compare the different algorithms and the features/indicators | Which of these computational models require fewer features in the algorithm? |
O | Outcome | Understand the prediction accuracy of the algorithms | What is the accuracy of the ML in comparison to other predictive models? |
Authors | Quality Grade | Algorithms Used | Data Source | Outcome | Accuracy |
---|---|---|---|---|---|
Bachelot et al., 2023 [37] | 80% | ML, SVM, RF, GBT, XGB, LR, DL, KNN | Age, BMI, tobacco consumption, FSH and LH assessment, T, inhibin B, prolactin, karyotype and search for Y-chromosome microdeletion, urogenital history (cryptorchidism, infection, trauma, gonadotoxic therapy, urogenital surgery, and varicoceles). | The presence/absence of spermatozoa after examination of the surgical specimens. A positive outcome was defined as obtaining enough spermatozoa for the ICSI procedure. | The models achieved an accuracy greater than the 60%, with the best performance of RF (84.6%), GBT (76.9%), and XGB (80.8%). |
Zeadna et al., 2020 [38] | 80% | GBT, MvLRM | Baseline hormonal profile (before TESE) of serum FSH, LH, and T | The cutoff value for successful sperm retrieval was the presence of at least one viable of mature sperm in the testicular tissue. | AUC = 0.807 for predicting the presence of spermatozoa in patients with NOA. |
Ramasamy et al., 2013 [39] | 100% | ANN, LR | Clinical and laboratory data of sperm extraction | Development of an ANN and nomogram to predict sperm retrieval with microdissection testicular sperm extraction. | Nomogram accuracy: 59.6% ANN accuracy: 59.4% |
Ma et al., 2011 [40] | 90% | Three ANNs with feed forward-back propagation architecture were used | Leptin and FSH level | Leptin resulted in a good assistant marker for NOA diagnosis. ANNs improved the prediction accuracy of sperm retrieval. | ANN1 performance resulted in the best in the prediction of sperm recovery in NOA patients (AUC = 0.83). |
(a) | |||||
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Authors | Quality Grade | Algorithms Used | Data Source | Outcome | Accuracy |
Guo et al., 2023 [41] | 91% | LR, RF, SVM | Metabolomics and proteomics using CASA and DFI | Proteins related to energy metabolism and oxidative stress were found to be differential biomarkers. | Estimated accuracy for each algorithm was 87% each |
Yuzkat, Ilhan and Aydin, 2023 [42] | 100% | YOLOv5 Deep Learning Based Object | Dataset including 12 sperm specimen videos | YOLOv5 achieved the best results in the first and second scenarios. | 95% for almost all the videos. |
Huang et al., 2023 [43] | 90% | SMOreg, ML, RF, SGB, LASSO, Ridge, XGBoost | 85 videos of human semen samples and related participants’ data. | ML-based analysis predicted sperm motility. The addition of participants’ data did not improve the algorithm’s performance. | The two-stream NNs were not significantly better than the baseline one. |
Lee et al., 2022 [44] | 70% | CNN based on U-Net architecture | 3-channel input of size 256 × 256 pixels. | The algorithm detects and locates individual sperm cells. | Precision 84.0%, Sensitivity 72.7% |
Fan et al., 2022 [45] | 68% | DeepResolution2 (DNN), U-Net4S, k-CNN, U-Net4R models | GC-MS data files—Untargeted dataset | DeepResolution2 outperformed other methods in peak identification and quantification | AUC = 0.99 |
Miami, Mirroshandel, and Nasr, 2022 [46] | 91% | Genetic Neural Architecture Search (GeNAS)—GeNAS Weighting Factor (GeNAS-WF) | MHSMA dataset—images of human sperm cells | Crossover operation helped GeNAS change the length of chromosomes. | 91.7% in vacuole detection, and 77.7% in acrosome detection. |
Otti et al., 2022 [47] | 90% | Sparse optical flow with Lucas-Kanade algorithm, Crocker-Grier algorithm (MLP, RNN, CNN) | A dataset composed of semen analysis and related participants’ data | Improved prediction of sperm motility compared to the previous state of the art published data. | The MAE was reduced from 8.83 to 7.31. |
Ilhan & Serbes, 2022 [48] | 80% | Two-stage fine-tuned DNN: soft voting decision level ensemble learning scheme | Sperm Morphology Image Data Set (SMIDS), Human Sperm Head Morphology Set (HuSHeM) and SCIAN-Morpho. | The two-stage fine-tuning approach improves accuracy. The fusion of deep-nets results in higher precision scores. | 90.9% for SMIDS, 88.9% for HuSHeM, and 72.1% for SCIAN-Morpho. The DNN increased the accuracy up to 92.1. |
Abbasi, Miahi, and Mirroshandel, 2021 [49] | 100% | DMTL, DTLA | Dataset of non-stained grayscale sperm images. | The algorithm automated sperm abnormality detection with improved accuracy in the identification of the head, acrosome, and vacuole. | Accuracy for vacuole labels reached the 93.75%. |
Yüzkat, Osman Ilhan and Aydin, 2021 [50] | 68% | CNN models Decision-level fusion techniques | Dataset of normal and abnormal sperm morphology images | The soft voting-based fusion approach achieved high classification accuracies for the three different data sets. | The accuracy of all tested models was greater than 94% for prospective azoospermic patients. |
Yibre & Koçer, 2021 [51] | 68% | AAA with learning-based fitness evaluation method, MLP, NB, SVM, KNN, RF | Dataset for prediction of semen quality—UCI public data source. | The outcome information from the automated medical diagnosis system is directly related to human health. | AUC = 0.975 for the classification of sperm quality. |
Lesani et al., 2020 [52] | 77% | ANN, FSNN | Full absorption spectrum data comprised 711 data points per sample. | The ML-based spectrophotometry approach accurately quantifies sperm concentration. | Over 93% accuracy in prediction. |
Javadi & Mirroshandel, 2019 [53] | 95% | Deep CNN, PCA, KNN | MHSMA dataset. Non-stained and low-resolution images. | The algorithm resulted seven times faster than SMA. | 84.7% for acromosome, 83.9% for head, 94.6% for vacuole. |
Movahed, Mohammadi and Orooj, 2019 [54] | 100% | K-means clustering (CNN) and SVM classifier | Image data | The model outperformed previous works for head, acrosome, and nucleus segmentation. | Dice similarity of 0.90 for the head segment, 0.77 for the axial filament. |
Vickram et al., 2013 [55] | 100% | BPNN, mean squared error calculated for error propagation | Seminal fluid | Good correlation between estimated and predicted values (r = 0.9). Potential for Zinc prediction in human semen. | The MAE for the BPNN model was 0.025, −0.080, 0.166, and −0.057 for protein, fructose, glucosidase, and zinc, respectively. |
Steigerwald & Krause, 1998 [56] | 80% | ANN | CASA system with automatic determination of midpieces and sperm tails | Reproducible results for sperm morphology estimation | No significant difference in the % of normal forms compared to direct microscopical inspection. |
Vickram et al., 2016 [57] | 90% | BPNN model and RBFN | Semen samples from human participants | The BPNN model had an acceptable absolute error for predicting biochemical markers. The RBFN model had higher error compared to the BPNN model | Mean absolute error for BPNN model: 0.025, 0.080, 0.166, 0.057. RBFN model had higher error compared to BPNN model |
(b) | |||||
Authors | Quality Grade | Algorithms Used | Data Source | Outcome | Accuracy |
GhoshRoy, Alvi, and Santosh, 2023 [58] | 100% | SVM, RF, DT, LR, naive Bayes, Sdaboost, MLP | UCI datasets covering 9 inputs including environmental and lifestyle factors. | DT and RT models performed well, while SVM and naive Bayes provided poor prediction outcomes. | All the seven tested models achieved an accuracy higher than the 80% with the best performance of the RF classifier (96.7% of prediction). |
Ito et al., 2021 [59] | 80% | Google Cloud, AutoML Vision | Images of testicular tissues stained with hematoxylin and eosin. | Improved precision for Johnsen scores of 4–5 and 6–7 to 95 and 97. | At 400× magnification: 82.6% average precision of the algorithm with expansion images: 99.5% |
Girela et al., 2013 [60] | 80% | ANN, MLP | Sociodemographic, demographic, environmental, and health-related factors. | ANN predicted semen parameters with a high evel of accuracy in the prediction of sperm concentration and motility. | MLP showed a high accuracy in prediction of sperm concentration (93.3%) and motility (89.3%). |
Gil et al., 2012 [61] | 90% | C4.5 algorithm used for decision tree, MP, and SVM for prediction. | The data included information on environmental and lifestyle factors. | MLP and SVM showed the highest accuracy in prediction. Decision trees provided a visual and illustrative approach. | MLP and SVM achieved the highest accuracy (69%), being SVM the one with the higher Sensitivity (73.9%) whereas MLP obtained superior Specificity values (25%). |
Authors | Quality Grade | Algorithms Used | Data Source | Outcome | Accuracy |
---|---|---|---|---|---|
Zhou et al., 2023 [62] | 74% | LASSO, Boruta, SVM-RFE, Random Forest | Transcriptome sequencing data of testicular cells. Immunohistochemical staining data for protein expression levels | An RF model based on the transcription factors ETV2, TBX2, and ZNF689 was successfully developed to diagnose NOA. | RF model achieved an AUC of 1000 and an F-measure of 1000. |
Peng et al., 2023 [63] | 90% | ANN, LASSO, SVM-RFE, LR, RF | RNA-binding protein-related genes. Testicular samples, clinical samples. scENA-seq data | An ANN diagnosis model based on RNA-binding proteins DDX20 and NCBP2 was developed. The ANN model exhibited reliable predictive performance in multiple cohorts | Training cohort (GSE9210) scored 74.1% of accuracy, GSE45885 the 90.3%, GSE45887 the 85.0%, while local cohort only the 59.1% |
Samli & Dogan, 2004 [64] | 100% | ANN, Logistic Regression | Patient age, duration of infertility, serum hormone levels, and testicular volumes | The NN correctly predicted the outcome in 59 of the 73 test set patients (80.8%) | The accuracy of the ANN model is 80%. The accuracy of the LR model is 66%. |
Authors | Quality Grade | Algorithms Used | Data Source | Outcome | Accuracy |
---|---|---|---|---|---|
He et al., 2023 [65] | 91% | WGCNA | Three azoospermia RNA chip datasets (GSE145467, GSE45885, and GSE9210), one COVID-19 RNA chip dataset (GSE157103), and one cryptozoospermia single-cell RNA-sequencing dataset (GSE153947) were downloaded from the NCBI GEO database | Screening of two different molecular subtypes revealed that azoospermia-related genes were associated with clinicopathological characteristics of age, hospital-free-days, ventilator-free-days, Charlson score, and d-dimer of patients with COVID-19 | The accuracy of successful IVF was 0.72 |
Mirroshandel, Ghasemian and Monji-Azad, 2016 [66] | 55% | Data mining, NB, SVM, MLP, IBK, Kstar, RC, J48, RF | Quality of zygote, embryo, and implantation outcome of injected sperms | Kstar model achieved the 95.1% in implantation outcome prediction | The RC model achieved the 83.8% of accuracy. The Kstar model the 95.9%. |
Wald et al., 2005 [67] | 68% | L & QDFA, LR, NNET | Maternal age, type of sperm retrieval, type of spermatozoa used (cryopreserved or “fresh”), and type of male factor infertility | The 4-hidden node NN model demonstrated high accuracy in predicting IVF/ICSI outcomes | The NN predicted intrauterine pregnancy with high accuracy (AUC = 0.923). |
Authors | Quality Grade | Algorithms Used | Data Source | Outcome | Accuracy |
---|---|---|---|---|---|
Guo et al., 2023 [68] | 90% | DLNM, BKMR | PREBIC cohort of semen samples from 3940 males. | Single- and two-pollutant models showed SO2, O3, PMs, and NO2 were negatively associated with progressive motility, total motility, and sperm morphology. | AUC = 0.889 |
Zhao et al., 2023 [69] | 77% | SVM, XGB, GLM, and RF | Two microarray datasets (GSE4797 and GSE45885) related to male infertility (MI) patients with spermatogenic dysfunction. | Cuproptosis-related genes were found both in healthy and men with spermatogenic dysfunction. | XGB model based on 5-gene showed superior performance on the external validation dataset GSE45885 (AUC = 0.812) |
Tang et al., 2023 [70] | 86% | WGCNA RF, SVM, GLM, XGB | NOA microarray datasets (GSE45885, GSE108886, and GSE145467) | The model based on IL20RB, C9orf117, HILS1, PAOX, and DZIP1 biomarkers had the highest AUC value, of up to 0.982, compared to other single biomarker models. | XGB algorithm that had the maximum AUC value (AUC = 0.946) |
Ory et al., 2022 [71] | 80% | LR, RF, SVM | Pre and post-operative clinical and hormonal data following treatment | A total of 45.6% of men experienced an upgrade in sperm concentration following surgery, 48.1% did not change, and 6.3% downgraded | The RT-supervised machine learning model had good accuracy in the prediction of outcome (AUC = 0.72). |
Gunderson et al., 2021 [72] | 100% | RF, SGB, LASSO, Ridge, XGBoost | Annual health screening data | Ridge regression showed the best performance for SMAPE and RAE metrics | ML model predicted successful conventional IVF with a mean accuracy of 0.72. |
Xu et al., 2021 [73] | 58% | CNN, DPPCG | Human protein-coding genes from the NCBI database and human proteins from the UniProt database | DPPCG harnessed the utility of heterogeneous biomedical big data in the effective indirect prediction of 794 causal genes of male infertility and associated pathological processes. | The accuracy of the deep CNN models was 0.70, with an average precision of 0.74, and an average recall rate of 0.56. |
Wang et al., 2021 [74] | 100% | GFLASSO | 138 environmental/ behavioral/ psychological variables and 32 male reproductive biomarkers in 796 young Chinese men. | Thirty-one of the thirty-two reproductive biomarkers had positive correlations with the predictive values, with an average correlation coefficient of 0.26, ranging from 0.10 to 0.40. | Not reported. |
Karthikeyan, Vickram and Manian, 2020 [75] | 80% | Data Mining | Semen samples from three different categories fertile (N = 20), Infertile (N = 20), and unilateral varicocele (N = 15) men. | There were 6 highly significant results: rs14988405 (R4W), rs201470131 (A52P), rs570385517 (R90C), rs17104534 (G240R), rs148319106 (V318M) and rs200608161 (V352L). | Not reported. |
Hicks et al., 2019 [76] | 100% | AdaBoost, GP, KNN, MLP-SKLearn, SVM, CatBoost and MLP-TensorFlow | Sequences of frames from video recordings of human semen under a microscope | Multimodal analysis methods combining video data with participant data did not improve the prediction of sperm motility compared to using only the video data. | RF was the best for participant data only (MAE = 11.368), for TIF only SMOreg (MAE = 10.800), TIF and participant ata RF scored a MAE = 11.617. |
Akinsal et al., 2018 [77] | 90% | MLP, ANN | Testicular volume, follicle-stimulating hormone, luteinizing hormone, total testosterone, and ejaculate volume of the patients. | Total testicular volume with LH had the highest power to find out which participant requires sex chromosome evaluation. | LR analyses and ANN predicted the presence-absence of chromosomal abnormalities with more than 95% accuracy. |
Ho et al., 2015 [78] | 77% | LDA | Detection and interpretation of pathogenic copy number variants of gonadal function. | Protein–protein interactions were the most informative for gene prediction, followed by gene expression and epigenetic marks | The AI scored an AUC of 0.711 in the classification of candidate genes. |
Powell et al., 2008 [79] | 100% | NN, LR, discriminant FA | Testis volume, sperm density, motility, and the presence of endocrinopathy. | LR and a neural network performed the best with receiver operating characteristic areas under the curve of 0.93 and 0.95 | LR and the NN performed the best with AUC=0.93 and 0.96 respectively. |
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Schmeis Arroyo, V.; Iosa, M.; Antonucci, G.; De Bartolo, D. Predicting Male Infertility Using Artificial Neural Networks: A Review of the Literature. Healthcare 2024, 12, 781. https://doi.org/10.3390/healthcare12070781
Schmeis Arroyo V, Iosa M, Antonucci G, De Bartolo D. Predicting Male Infertility Using Artificial Neural Networks: A Review of the Literature. Healthcare. 2024; 12(7):781. https://doi.org/10.3390/healthcare12070781
Chicago/Turabian StyleSchmeis Arroyo, Vivian, Marco Iosa, Gabriella Antonucci, and Daniela De Bartolo. 2024. "Predicting Male Infertility Using Artificial Neural Networks: A Review of the Literature" Healthcare 12, no. 7: 781. https://doi.org/10.3390/healthcare12070781
APA StyleSchmeis Arroyo, V., Iosa, M., Antonucci, G., & De Bartolo, D. (2024). Predicting Male Infertility Using Artificial Neural Networks: A Review of the Literature. Healthcare, 12(7), 781. https://doi.org/10.3390/healthcare12070781