Abstract
In the present work, we study a simple mathematical model that describes the competition of two bacterial species with an obligate one-way beneficial relationship for a limited substrate in a bioreactor associated with leachate recirculation. The substrate is present into two forms, insoluble and soluble substrates, where the latter is consumed by the two competing bacteria, which have two general nonlinear growth rates. The reduction of the model to a 2D one facilitates the study of the nature of the equilibrium points. The dynamic system admits multiple steady states. We provide necessary and sufficient conditions on the added insoluble and soluble substrates and the dilution rate to guarantee the existence, uniqueness, and local and global stability of such steady states. It is deduced that the coexistence of both bacteria is possible, which contradicts the competitive exclusion principle. In the second step, we propose an optimal control on the leachate recirculation rate that reduces the organic matter inside the reactor. Finally, we provide some numerical examples that corroborate and reinforce the theoretical findings.
Keywords:
chemostat; competition; competitive exclusion principle; obligate one-way beneficial relationship; leachate recirculation; local and global stability; coexistence; optimal control MSC:
34C11; 34C12; 34C45; 34C60; 37C75; 92-10
1. Introduction
A chemostat is a specific bioreactor used for the bacterial multiplication process for certain substrates in a controlled environment. In particular, the chemostat was used for the degradation of some organic matter in a liquid medium and to study the influence of such nutriment on bacterial growth. The competition between two bacteria types for a single essential resource has been considered in several theoretical studies. A classical theory result postulates that the two species cannot coexist. This result is named the competitive exclusion principle. The competitive exclusion principle was proved in several mathematical studies [1,2,3,4,5]. Several similar mathematical models were proposed and are analysed in [6,7,8,9,10,11,12,13], that aim to give an explanation of the coexistence of competing bacteria in real life through intra- and inter-specific relationships [14,15,16,17,18,19,20]. In [13,21], a viral infection was added to the competition which permits the persistence of both species.
The cooperation between different bacterial species has received great interest in recent decades since it has a major role in biodiversity [22,23]. In [24], the authors claimed that obligate intracellular bacteria can be found in all protozoa, plants, and animals, and that these specific relationships ensure the stable integration of the cell into a biological system, which is known as the endosymbiosis theory [25,26]. By using real experiments, it was deduced that in several cases, these relationships between two bacteria are obligatory and could be either in one or in both directions [27,28,29,30,31,32]. This would, of course, reflect the principle of competitive exclusion and keep the biodiversity in an ecosystem, which is also relevant from an engineering point of view. In fact, ensuring the presence of a microorganism inside an ecosystem provides several advantages. Such diversity plays a major role in several potential applications in agriculture and pollutant treatment.
In this paper, we consider an obligate one-way beneficial relationship between two species, where one species of which derives a benefit while the other suffers no harm and derives no advantage. More simply, we consider a relationship between two species in which one obtains benefits from the other without harming or benefiting it. The species that draws the benefit can be seen as a commensal, while the other can be seen as the host species [33]. Moreover, several studies have used the leachate recirculation within the waste of a waste storage center by creating favourable humidity conditions for the biodegradation of the organic matter contained in the waste [34,35]. Hence, it became possible to observe whether this technical choice allows for a reduction in the amounts of waste within this environment in the long term. Several tests were carried out in the laboratory to clarify the influence of physico-chemical factors and leachate recirculation on the characteristics of organic matter in household waste [36]. These studies demonstrate that the recirculation of leachates accelerates the production of biogas and the transfer of matter from the solid compartment to the liquid compartment [37]. Waste that has been treated with leachate recirculation shows advanced biodegradation of its organic matter compared to other waste [38]. In [39], the authors studied the problem of leachates in landfills, while [40] concerns a bioreactor in batch mode, which is the form most commonly used to model a landfill. Few mathematical works have modelled the leachate recirculation in a bioreactor [41,42,43]. In the present work, we extend the classical chemostat’s model [44] by considering a competition of two bacterial species that have an obligate one-way beneficial relationship when we recirculate the leachate inside the chemostat. The dynamics admits three steady states that we characterise in this work. Furthermore, we design an optimal control of the recirculation of leachate to optimise the organic matter inside the reactor.
The article is organised as follows: in Section 2, we present a four-dimensional dynamical system describing the competition of two bacterial species that have an obligate one-way beneficial relationship for an essential nutriment in a chemostat where the existence of the first biomass depends essentially on the presence of both the substrate and the second species, while the existence of the second species depends only on the presence of the substrate. We take into account the leachate recirculation in the reactor. In Section 3, some hypotheses on the bacterial growth rates are added, the positivity and boundedness of the solution are proved, and the definition of equilibrium points is provided. In Section 4, the four-dimensional dynamical system is reduced to planar dynamics. We discuss the existence and the stability of the equilibria of the reduced dynamics with respect to the operating parameters (substrates input concentrations and dilution rate) and the bacterial growth rates. Next, in Section 5, we discuss the global stability for the reduced dynamics and then for the main dynamics. In Section 6, we propose an optimal control strategy by minimising the organic matter inside the reactor and keeping an optimal recirculation rate for the leachate. In Section 7, we provide several numerical tests that validate the main theoretical results for both the direct and the optimal control problems. We finish the paper by providing a brief conclusion in Section 8.
2. Mathematical Model
The model proposed in this work is an extension of the classical chemostat model [44] by adding an obligate benefit relationship in one direction from the first species to the second one and by taking account of the leachate recirculation inside the reactor (see Figure 1) as it is applied in some references [39,40,41,43] with generalised growth functions. Let us denote by , , , and the main variables of the dynamical system describing the concentrations of insoluble and soluble substrates, species 1 and species 2, present in the reactor at time t (see Figure 2).
Figure 1.
Interactions between two competing bacteria associated with an obligate one-way benefit and recirculation of the leachate [43].
Figure 2.
A classical bioreactor (Chemostat) associated with leachate recirculation [41].
Our model is given by the following four-dimensional dynamics.
where and denote the concentrations of added soluble and insoluble substrates to the reactor, respectively. and are the yield coefficients. D describes the rate of dilution of the reactor. The constant parameters , , D, , and are positive. The growth functions and are of class . The hydrolysis rate is a function on . More details on the variables and parameters are given in Table 1.
Table 1.
Variables, functions and parameters of the dynamics (1).
A simple transformation of the dynamics (1) can be made through the new notations as follows: , , , , , , , and . We obtain a more simple system as follows:
where , , . The functions , , and are of class satisfying:
- A1.
- , , .
- A2.
- , .
- A3.
- , .
- A4.
- , .
- A5.
- is increasing such that .
Assumption A1 expresses that no growth can be possible without the presence of the soluble substrate for bacteria 2, and that bacteria 2 growth increases with the soluble substrate concentration. Assumption A2 expresses that no growth can be possible without both soluble substrate and species 2 for species 1. Assumptions A3 and A4 express that species 1 growth increases with both soluble substrate and species 2. (species 2) favors the growth of (species 1), while (species 1) has no direct action on (species 2) apart from competition for substrate. Assumption A5 confirms that no production of soluble substrate can take place without leachate recirculation associated with the presence of the insoluble substrate that will be converted into a soluble one.
Remark 1.
The function of Holling type II known also as Monod functions [45,46] can express growth rates that satisfy all previous assumptions: A1 to A4.
where the constants , , , , and q are positive.
3. Basic Properties
Lemma 1.
If the function satisfies Assumption A5, then there exists a unique value satisfying
where .
Proof.
Consider the function ; thus, , , and . Then, there exists a unique value that satisfies (3). □
Consider the following assumption on the species 2 growth rate .
- A6.
- .
Lemma 2.
If satisfies assumptions A1 and A6, then there exists a unique value that satisfies
Proof.
It is evident because is an increasing function that satisfies , . □
Consider the following assumption on the species 1 growth rate .
- A7.
- .
Lemma 3.
Under assumptions A2, A4, and A7, then there exists a unique value such that satisfying
Proof.
It is evident because , and is an increasing function. □
The solution of the dynamics (2) is defined on the non-negative cone [44] and satisfies the following Proposition.
Proposition 1.
Proof.
Lemma 4.
Let be a solution of the system (2). Consider
Then,
and
Let us now study the nature of the equilibrium points of the system (2).
Theorem 1.
Proof.
Assume that the functions of system (2) verify Assumptions A1 to A7. Let be a non-negative equilibrium point of system (2); then, we obtain
If , then , and either and then or and then and ; therefore, we obtain . The case and is impossible, since . Still, there is the case when and . Then, we obtain , , and . From Lemmas 1–3, we deduce that , and and thus . Therefore, we deduce the uniqueness of the positive equilibrium point, . □
4. Reduced System
In order to study the stability of model (2), we can restrict system (2) to the invariant attractor set to obtain the following planar system.
with
and
as state space. Observe that the dynamics (2) and (10) are equivalent and that the dynamics (12) is deduced when considering the dynamics (10) such that and .
According to Theorem 1, the planar dynamics (12) admits three equilibrium points given by , and .
Lemma 5.
Assume that Assumptions A1 to A7 are satisfied. Therefore, and are saddle points and is a locally exponentially stable equilibrium point for system (12).
Proof.
The Jacobian matrix is given by
such that is expressed at and is expressed at . Let us study the matrices , and . Since
then the eigenvalues are and according to Assumption A6. Consequently, is a saddle point of (12). The matrix at is given by
Their eigenvalues are by Assumption A7 and . Consequently, is a saddle point of (12).
The matrix at is given by
Note that
and
Thus, has two eigenvalues with negative real parts, and then the equilibrium point is locally exponentially stable. □
Theorem 2.
Assume that Assumptions A1 to A7 are verified. Therefore, and are saddle points; however, is a locally exponentially stable equilibrium point.
Proof.
It is evident that the equilibrium points , and have the same nature as the equilibrium points , and , respectively. □
5. Global Analysis
We start by studying the global stability of the reduced system (12). Then, we deduce on the global stability of (2).
5.1. Global Stability of (12)
We start by proving that and are positively invariant sets and that system (12) has no possible periodic orbits inside .
Lemma 6.
Assume that Assumptions A1–A7 hold. The sets and are positively invariant sets. Furthermore, the model (12) admits no periodic solution inside .
Proof.
We can verify that and are positively invariant, since we have
Now, consider a solution of (12) inside , and we aim to exclude the possibility of a periodic solution inside .
Notice that axis and are invariant. By using the change of variables and for . Thus, we obtain the new dynamics given hereafter:
Note that for , we have
We consider the criterion of Dulac (see [47], Chapter 6) when applied to (15) for trajectories belonging to the simply connected region
Since does not change signs in , this criterion ensures that the system (15) has no periodic trajectory in . Then, the dynamics (12) has no periodic orbit in . It cannot have polycycles because there is only one equilibrium point in . Next, let us proceed by contradiction to prove that the system (12) has no periodic orbit inside . Suppose that there exists in a periodic solution of (12) that we denote . We deduce easily from the fact that is positively invariant that necessarily either for all or for all . If for all ; then, necessarily, for all , . Thanks to Assumptions A1 to A7, we deduce that necessarily, converges either to 0 or to when the time tends to the infinity. If for all , then necessarily, for all , and converges to zero when the time tends to the infinity. This concludes the proof. □
We are ready to establish a crucial result for planar system (12).
Theorem 3.
Proof.
Consider a solution of (12) belonging to . The system (12) has no unbounded trajectory in because is a positively invariant compact set. Therefore, is a bounded trajectory. Consequently, it admits a compact -limit set, that we denote , which is included in . According to the Poincaré–Bendixon Theorem [47], either contains an equilibrium point or (12) admits a periodic solution in . Since Lemma 6 ensures that there exist no periodic solutions of (12) in , necessarily contains an equilibrium point of (12). The system (12) admits three equilibrium points , and . and are saddle points, and only is a stable node. If , then because is locally exponentially stable (see Lemma 5). Next, let us prove that by proceeding by contradiction.
Let . is an invariant compact set and . Assume that contains a point M on the axis:
- M cannot be , because is an unstable node and cannot be a part of the -limit set of ;
- If . contains . Since is compact, then it contains the adherence ; thus, contains , which is not possible;
- If . As is invariant, then , which is not possible since is bounded and ;
- If . contains . Since is compact, then it contains the adherence and then contains , which is not possible;
- If , then is not reduced to . Using the theorem of Butler–McGehee, we deduce that contains a point P of other that , which is not possible.
Thus, the -limit set cannot contain any point from the axis. This allows us to conclude that all the trajectories of the dynamics (12) in converge asymptotically to . □
5.2. Global Analysis of the Main Dynamics (2)
In this section, we aim to prove the main results of this paper.
Theorem 4.
Suppose that the dynamics (2) satisfies Assumptions A1 to A7. Therefore, the steady state is globally asymptotically stable.
Proof.
Theorem 4 will be proved by using an approach applied in [16] since the dynamics of the system (12) admits only stable and unstable steady states, and there are neither periodic trajectories nor cyclic chains. By using the results of Theme [48], we deduce the asymptotic behaviors of the trajectories of the main dynamics (2) from the asymptotic behaviors of the trajectories of the reduced dynamics (12). Let be a solution of (2). Therefore, is a trajectory of the following non-autonomous system:
where and are solutions of Equations (8) and (9), which converge asymptotically to zero. This dynamics (17) is a non-autonomous dynamics which converges to the autonomous dynamics (12). Note that the reduced system (12) admits only locally stable and unstable steady states, and there are no periodic trajectories nor cyclic chains. Therefore, by using the theory of Thieme [48], we conclude that the asymptotic behaviours of the trajectories of the main dynamics (17) from the asymptotic behaviours of the trajectories of the reduced dynamics (12). This allows us to conclude. □
Remark 2.
An alternative way to prove Theorem 4 is by considering the new coordinates
which leads us to consider the system
with , . Therefore, since the dynamics (18) satisfies the assumptions given in [44] (Appendix F), we can conclude on the global asymptotic stability of the equilibrium point .
For the rest of the paper, we assume that with is a constant.
6. Optimal Control on Leachate Recirculation
Assume that the leachate is added to the reactor continuously with a rate r which is different to the dilution rate, D. The main goal of the optimal strategy is to reduce the organic matter inside the chemostat through an optimal rate for leachate recirculation. Therefore, we will assume that the rate (recirculation costs) is variable on the time interval where is a constant. Assume that and are globally Lipschitz having Lipschitz constants and , respectively, with upper bounds and , respectively. Therefore, the goal is to find the optimal control function in the admissible set
minimising the functional given hereafter:
For appropriate values of the constants and , we aim to minimise the quantity of the organic matter in its two forms and keeping minimal the control cost. By using the theory in [49], one can easily prove that both the optimal control and the state exist. For , the model (2) can be written as follows
with and
Theorem 5.
The continuous function is uniformly Lipschitz.
Proof.
One can see that the continuous function is uniformly Lipschitz once it satisfies
where . The matrix B satisfies
thus,
with and thus the continuous function, is uniformly Lipschitz. □
Thus, the dynamics (19) has a unique solution. By using Pontryagin’s maximum principle [49,50,51], the control problem can be studied using the Hamiltonian function as follows:
The adjoint variables , and are solutions of the following adjoint system
satisfying , , , and .
The derivatives of the Hamiltonian are given by
Therefore, has a unique solution given by
provided that and . To summarise, the control characterisation is:
7. Numerical Examples
We confirm the obtained results by some numerical examples by taking Holling’s functions type II [45,46] (also known as Monod functions) to describe the growth functions and the hydrolysis function.
where the constants , , , , q, and are positive. The used functions , , and satisfied Assumptions A1 to A7. The values of the parameters are given in Table 2. The numerical method applied to solve the model is the Runge–Kutta–Fehlberg method (RKF45) under MATLAB R2024a software (ode45).
Table 2.
The used parameters values for the numerical simulations. Since we have no biological data, the parameter values are chosen arbitrarily.
7.1. Numerical Examples for System (2)
We provide several numerical examples for system (2) where the leachate recirculation rate is fixed; . We start by three examples satisfying Assumptions A1 to A7 where the dilution rate , , and , which ensure the global stability of the unique positive equilibrium point as it is proved in Theorem 4. The persistence of competing bacteria can be seen in Figure 3, Figure 4 and Figure 5 (left). By varying the initial conditions, the solutions converge to the positive point (Figure 3, Figure 4 and Figure 5, right).
Figure 3.
Comportment of system (2); the comportment of the components (left) and the comportment (right) for . The red dot (right) is the equilibrium point in the plane ().
Figure 4.
Comportment of system (2); the comportment of the components (left) and the comportment (right) for . The red dot (right) is the equilibrium point in the plane ().
Figure 5.
Comportment of system (2); the comportment of the components (left) and the comportment (right) for . The red dot (right) is the equilibrium point in the plane ().
In Figure 6, we chose satisfying Assumptions A1 to A6 but not Assumption A7. As can be seen, species 2 persists; however, species 1 goes to extinction and the global stability of the steady state (Figure 6, right). In Figure 7, and thus Assumptions A1 and A5 are not verified. Both competing bacteria go to extinction and then the trivial steady state is globally asymptotically stable. All solutions filling the positive cone converge to the point (Figure 7, right). By comparing Figure 3, Figure 4, Figure 5, Figure 6 and Figure 7, one can see that by increasing the dilution rate (D) values, the equilibrium point approaches slowly the steady state for a range of values of D; then, the steady state approaches the trivial steady state corresponding to the extinction of both bacteria.
Figure 6.
Comportment of system (2); the comportment of the components (left) and the comportment (right) for . The red dot (right) is the equilibrium point in the plane ().
Figure 7.
Comportment of system (2); the comportment of the components (left) and the comportment (right) for . The red dot (right) is the equilibrium point in the plane ().
7.2. Numerical Examples for the Control Problem
In the following examples, we assume that the control, r, is a time-varying function, , with bounds given by and and initial value . We consider an initial state value with final time . The used numerical scheme for the control problem is given in Appendix A.
As it is seen in Figure 8, Figure 9 and Figure 10, the optimal solution is very smooth. The values of the control decrease if we increase the values; however, they increase if we increase the values of and . Note that the final values of the organic matter and the biomass are the same when changing the values of , , and . The optimal strategy allows to decrease the organic matter and optimise the control values (costs).
Figure 8.
Influence of the optimal strategy on the dynamics for , , , .
Figure 9.
Influence of the optimal strategy on the dynamics for , , , .
Figure 10.
Influence of the optimal strategy on the dynamics for , , , .
8. Conclusions
We studied a simple four-dimensional mathematical model describing an obligate one-way beneficial relationship from one species to the other one under perfect mixing conditions in the presence of the leachate recirculation. We considered a two-component nutriment whose soluble component is degraded by both competing species and the insoluble nutriment is exposed to a solubilisation process. We reduced the model to a planar one, we study the local and global stability, and then we applied Thieme’s results [48] to deduce the persistence of both competing bacteria. This result contradicts the competitive exclusion principle. Furthermore, we proposed an optimal control on the leachate recirculation with the aim to reduce the organic matter inside the chemostat with optimal operation costs. Finally, we provided several numerical tests confirming the obtained results.
The effect of leachate recycling can be considered in several bioreactor configurations, in particular the membrane bioreactor process for a wastewater treatment. Another possible extension of this study that can be considered in the future is to investigate the impact of the periodic dilution rate on increasing bacteria production, which leads to reducing the organic matter (both insoluble and soluble nutriments).
Author Contributions
Conceptualisation, H.H.A., N.A.A. and M.E.H.; methodology, H.H.A., N.A.A. and M.E.H.; software, H.H.A., N.A.A. and M.E.H.; investigation, H.H.A., N.A.A. and M.E.H.; visualisation, H.H.A., N.A.A. and M.E.H.; writing—original draft, H.H.A., N.A.A. and M.E.H.; writing—review and editing, H.H.A., N.A.A. and M.E.H. All authors have read and agreed to the published version of the manuscript.
Funding
This work was funded by the University of Jeddah, Jeddah, Saudi Arabia under grant No. (UJ-24-DR-3251-1).
Data Availability Statement
The original contributions presented in the study are included in the article; further inquiries can be directed to the corresponding author/s.
Acknowledgments
This work was funded by the University of Jeddah, Jeddah, Saudi Arabia, under grant No. (UJ-24-DR-3251-1). Therefore, the authors thank the University of Jeddah for its technical and financial support. The authors are also grateful to the unknown referees for the many constructive suggestions, which helped to improve the presentation of the paper.
Conflicts of Interest
The authors declare no conflicts of interest.
Appendix A. Appropriated Scheme for the Control Problem
Consider the subdivision of the interval as follows . Let , , , , , , , and approaching , , , , , , , and the control at the time . An improvement of the Gauss–Seidel-like implicit finite-difference scheme will be applied for the state variables approximation, and a first-order backward-difference scheme will be applied for the adjoint variables approximation.
Hence, will be calculated as follows: provided that and . Thus, we will use the Algorithm A1 given hereafter.
| Algorithm A1: Optimal leachate recirculation strategy procedure |
, , for to do end |
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