Next Article in Journal
The Efficacy of Sunitinib Treatment of Renal Cancer Cells Is Associated with the Protein PHAX In Vitro
Previous Article in Journal
The Role of Prenatal Melatonin in the Regulation of Childhood Obesity
Open AccessArticle

Spaghetti to a Tree: A Robust Phylogeny for Terebelliformia (Annelida) Based on Transcriptomes, Molecular and Morphological Data

1
Scripps Institution of Oceanography, University of California, San Diego, CA 92037, USA
2
Centre for Biodiversity Genomics, Department of Biology, University of Copenhagen, 2100 Copenhagen, Denmark
3
Institute of Evolutionary Biology and Animal Ecology, University of Bonn, 53121 Bonn, Germany
4
Tjärnö Marine Laboratory, Department of Marine Sciences, University of Gothenburg, 405 30 Gothenburg, Sweden
*
Authors to whom correspondence should be addressed.
Biology 2020, 9(4), 73; https://doi.org/10.3390/biology9040073
Received: 14 March 2020 / Revised: 3 April 2020 / Accepted: 3 April 2020 / Published: 6 April 2020
(This article belongs to the Section Zoology)
Terebelliformia—“spaghetti worms” and their allies—are speciose and ubiquitous marine annelids but our understanding of how their morphological and ecological diversity evolved is hampered by an uncertain delineation of lineages and their phylogenetic relationships. Here, we analyzed transcriptomes of 20 terebelliforms and an outgroup to build a robust phylogeny of the main lineages grounded on 12,674 orthologous genes. We then supplemented this backbone phylogeny with a denser sampling of 121 species using five genes and 90 morphological characters to elucidate fine-scale relationships. The monophyly of six major taxa was supported: Pectinariidae, Ampharetinae, Alvinellidae, Trichobranchidae, Terebellidae and Melinninae. The latter, traditionally a subfamily of Ampharetidae, was unexpectedly the sister to Terebellidae, and hence becomes Melinnidae, and Ampharetinae becomes Ampharetidae. We found no support for the recently proposed separation of Telothelepodidae, Polycirridae and Thelepodidae from Terebellidae. Telothelepodidae was nested within Thelepodinae and is accordingly made its junior synonym. Terebellidae contained the subfamily-ranked taxa Terebellinae and Thelepodinae. The placement of the simplified Polycirridae within Terebellinae differed from previous hypotheses, warranting the division of Terebellinae into Lanicini, Procleini, Terebellini and Polycirrini. Ampharetidae (excluding Melinnidae) were well-supported as the sister group to Alvinellidae and we recognize three clades: Ampharetinae, Amaginae and Amphicteinae. Our analysis found several paraphyletic genera and undescribed species. Morphological transformations on the phylogeny supported the hypothesis of an ancestor that possessed both branchiae and chaetae, which is at odds with proposals of a “naked” ancestor. Our study demonstrates how a robust backbone phylogeny can be combined with dense taxon coverage and morphological traits to give insights into the evolutionary history and transformation of traits. View Full-Text
Keywords: phylogenomics; transcriptomics; Annelida; Terebelliformia phylogenomics; transcriptomics; Annelida; Terebelliformia
Show Figures

Graphical abstract

  • Supplementary File 1:

    ZIP-Document (ZIP, 1352 KB)

  • Externally hosted supplementary file 1
    Doi: 10.17632/7vrfjhbdxs.1
    Link: http://dx.doi.org/10.17632/7vrfjhbdxs.1
    Description: Supplementary File 1: Commands used for phylogenetic reconstruction and supplementary analyses, Supplementary File 2: Overview of characters and description of each state, Table S1: Voucher, sequencing and assembly statistics for the transcriptome dataset, Table S2: Sequence and voucher information for Sanger-sequenced taxa. Input and output files of the phylogenetic analyses are available at doi:10.17632/7vrfjhbdxs.1.
MDPI and ACS Style

Stiller, J.; Tilic, E.; Rousset, V.; Pleijel, F.; Rouse, G.W. Spaghetti to a Tree: A Robust Phylogeny for Terebelliformia (Annelida) Based on Transcriptomes, Molecular and Morphological Data. Biology 2020, 9, 73.

Show more citation formats Show less citations formats
Note that from the first issue of 2016, MDPI journals use article numbers instead of page numbers. See further details here.

Article Access Map by Country/Region

1
Search more from Scilit
 
Search
Back to TopTop