Peripheral Blood Mononuclear Cell Expression of Cation-Chloride Cotransporter (CCC) Genes in Premenstrual Dysphoric Disorder (PMDD) across the Menstrual Cycle—A Preliminary Study
Abstract
:Simple Summary
Abstract
1. Introduction
2. Materials and Methods
2.1. Study Design
2.2. Separation of PBMC, Isolation of Total RNA, and Real-Time Quantitative Reverse Transcription PCR
2.3. Data Analysis
3. Results
4. Discussion
5. Conclusions
Supplementary Materials
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
References
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Gene ID | Official Full Name | Number of Samples (%) with Unidentifiable Expression Levels | Removed from Analysis |
---|---|---|---|
SLC12A1 (NKCC2) | Solute carrier family 12 member 1 | 81 (92%) | Yes |
SLC12A2 (NKCC1) | Solute carrier family 12 member 2 | 88 (100%) | Yes |
SLC12A4 (KCC1) | Solute carrier family 12 member 4 | 0 (0%) | No |
SLC12A5 (KCC2) | Solute carrier family 12 member 5 | 28 (32%) | No |
SLC12A6 (KCC3) | Solute carrier family 12 member 6 | 0 (0%) | No |
SLC12A7 (KCC4) | Solute carrier family 12 member 7 | 0 (0%) | No |
IPO8 | Housekeeping gene | 0 (0%) | No |
TBP | Housekeeping gene | 0 (0%) | No |
Gene | Mean Value | SD | SE | CI |
---|---|---|---|---|
KCC1 | −0.0604 | 0.2206 | 0.0235 | 0.0467 |
KCC2 | 13.3948 | 1.4012 | 0.1809 | 0.3619 |
KCC3 | −1.6478 | 0.2013 | 0.0214 | 0.0426 |
KCC4 | −1.0667 | 0.3439 | 0.0366 | 0.0728 |
Gene | Parameter | F value (Degrees of Freedom) | Pr > F |
---|---|---|---|
KCC1 | Diagnosis | 2.00 (1, 56) | 0.1625 |
Subphase | 2.25 (7, 56) | 0.0435 * | |
Diagnosis × Subphase | 3.05 (7, 56) | 0.0086 ** | |
KCC2 | Diagnosis | 1.23 (1, 25) | 0.2770 |
Subphase | 0.90 (7, 25) | 0.5161 | |
Diagnosis × Subphase | 0.94 (7, 25) | 0.4877 | |
KCC3 | Diagnosis | 0.46 (1, 56) | 0.5012 |
Subphase | 0.69 (7, 56) | 0.6774 | |
Diagnosis × Subphase | 1.04 (7, 56) | 0.4110 | |
KCC4 | Diagnosis | 0.55 (1, 56) | 0.4628 |
Subphase | 0.85 (7, 56) | 0.5541 | |
Diagnosis × Subphase | 0.83 (7, 56) | 0.5683 |
Menstrual Cycle Day (Subphase) | Estimate | Standard Error | t-Value | p-Value |
---|---|---|---|---|
2 (Early Follicular) | 0.012 | 0.080 | 0.09 | 0.924 |
7 (Mid-Follicular) | 0.259 | 0.127 | 2.05 | 0.045 * |
12 (Periovulatory 1) | 0.234 | 0.125 | 1.88 | 0.065 |
13 (Periovulatory 2) | 0.213 | 0.138 | 1.55 | 0.127 |
14 (Periovulatory 3) | 0.348 | 0.131 | 2.66 | 0.010 * |
18 (Early Luteal) | 0.201 | 0.124 | 1.62 | 0.110 |
22 (Mid-Luteal) | 0.027 | 0.127 | 0.21 | 0.832 |
27 (Late Luteal) | −0.158 | 0.144 | −1.10 | 0.276 |
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Cho, S.; Soumare, F.; Mumford, S.L.; Rosas, P.C.; Abrieva, Z.; Davis, J.M.; Hamidovic, A. Peripheral Blood Mononuclear Cell Expression of Cation-Chloride Cotransporter (CCC) Genes in Premenstrual Dysphoric Disorder (PMDD) across the Menstrual Cycle—A Preliminary Study. Biology 2024, 13, 377. https://doi.org/10.3390/biology13060377
Cho S, Soumare F, Mumford SL, Rosas PC, Abrieva Z, Davis JM, Hamidovic A. Peripheral Blood Mononuclear Cell Expression of Cation-Chloride Cotransporter (CCC) Genes in Premenstrual Dysphoric Disorder (PMDD) across the Menstrual Cycle—A Preliminary Study. Biology. 2024; 13(6):377. https://doi.org/10.3390/biology13060377
Chicago/Turabian StyleCho, Soojeong, Fatimata Soumare, Sunni L. Mumford, Paola C. Rosas, Zarema Abrieva, John M. Davis, and Ajna Hamidovic. 2024. "Peripheral Blood Mononuclear Cell Expression of Cation-Chloride Cotransporter (CCC) Genes in Premenstrual Dysphoric Disorder (PMDD) across the Menstrual Cycle—A Preliminary Study" Biology 13, no. 6: 377. https://doi.org/10.3390/biology13060377
APA StyleCho, S., Soumare, F., Mumford, S. L., Rosas, P. C., Abrieva, Z., Davis, J. M., & Hamidovic, A. (2024). Peripheral Blood Mononuclear Cell Expression of Cation-Chloride Cotransporter (CCC) Genes in Premenstrual Dysphoric Disorder (PMDD) across the Menstrual Cycle—A Preliminary Study. Biology, 13(6), 377. https://doi.org/10.3390/biology13060377