Causal Effects of Modifiable Behaviors on Prostate Cancer in Europeans and East Asians: A Comprehensive Mendelian Randomization Study
Abstract
:Simple Summary
Abstract
1. Introduction
2. Materials and Methods
2.1. Selection of Genetic Variants
2.2. Outcome Traits
2.3. Statistical Analysis
3. Results
3.1. Baseline Characteristics
3.2. MR Analyses in Europeans
3.3. MR Analyses in East Asians
4. Discussion
5. Conclusions
Supplementary Materials
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
References
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Phenotype | GWAS ID | Total Population | European Discovery | European Replication | ||||||
---|---|---|---|---|---|---|---|---|---|---|
SNPs (n) | F-Stat | R2 (%) | Power (%) | SNPs (n) | F-Stat | R2 (%) | Power (%) | |||
Tobacco smoking | ||||||||||
Ever smoking | ukb-b-20261 | 461,066 | 79 | 9.29 | 0.16 | 39 | 80 | 9.27 | 0.16 | 10 |
Smoking initiation | ieu-b-4877 | 632,802 | 92 | 172.17 | 2.44 | >99 | 87 | 173.00 | 2.32 | 68 |
Lifetime smoking index | N/A | 462,690 | 108 | 20.27 | 0.47 | 82 | 120 | 19.65 | 0.51 | 21 |
Alcohol drinking | ||||||||||
Alcohol frequency | ukb-b-5779 | 462,346 | 87 | 113.08 | 2.08 | >99 | 97 | 130.57 | 2.40 | 70 |
Alcohol quantity | ieu-b-73 | 335,394 | 33 | 32.94 | 0.31 | 65 | 31 | 31.34 | 0.30 | 14 |
Fruit intake | ||||||||||
Fresh fruit | ukb-b-3881 | 446,462 | 49 | 15.60 | 0.17 | 41 | 53 | 16.65 | 0.18 | 10 |
Dried fruit | ukb-b-16576 | 421,764 | 36 | 24.08 | 0.21 | 49 | 39 | 26.64 | 0.23 | 12 |
Vegetable intake | ||||||||||
Raw vegetables | ukb-b-1996 | 435,435 | 20 | 16.52 | 0.08 | 21 | 22 | 18.85 | 0.09 | 8 |
Cooked vegetables | ukb-b-8089 | 448,651 | 15 | 16.93 | 0.07 | 20 | 16 | 24.03 | 0.07 | 7 |
Physical activity | ||||||||||
Duration of vigorous activity | ukb-b-13932 | 251,501 | 3 | 3.47 | <0.01 | 5 | 3 | 3.47 | <0.01 | 5 |
Duration of moderate activity | ukb-b-2346 | 343,827 | 3 | 7.07 | <0.01 | 6 | 3 | 10.91 | <0.01 | 5 |
Duration of light activity | ukb-b-8865 | 64,949 | 3 | 2.28 | 0.01 | 5 | 3 | 2.28 | 0.01 | 5 |
Sexual behavior | ||||||||||
Age of initiation | ebi-a-GCST90000047 | 397,338 | 167 | 16.70 | 0.70 | 94 | 169 | 16.85 | 0.70 | 27 |
No. of sexual partners | ukb-b-4256 | 378,882 | 59 | 25.70 | 0.39 | 75 | 59 | 25.41 | 0.39 | 17 |
Sleep behavior | ||||||||||
Insomnia | ukb-b-3957 | 462,341 | 36 | 8.64 | 0.13 | 33 | 40 | 12.98 | 0.20 | 11 |
Nap during day | ebi-a-GCST011494 | 452,633 | 96 | 15.20 | 0.32 | 67 | 95 | 15.88 | 0.34 | 15 |
Daytime dozing | ukb-b-5776 | 460,913 | 26 | 10.58 | 0.06 | 18 | 28 | 10.39 | 0.06 | 7 |
Phenotype | GWAS ID | Total Population | East Asian Discovery | East Asian Replication | ||||||
---|---|---|---|---|---|---|---|---|---|---|
SNPs (n) | F-Stat | R2 (%) | Power (%) | SNPs (n) | F-Stat | R2 (%) | Power (%) | |||
Tobacco smoking | ||||||||||
Ever smoking | ukb-e-20160_EAS | 2649 | 10 | 6.17 | 2.29 | 28 | 7 | 6.91 | 1.80 | 49 |
Alcohol drinking | ||||||||||
Alcohol frequency | ukb-e-1558_EAS | 2658 | 6 | 18.96 | 4.11 | 46 | 4 | 20.12 | 2.94 | 70 |
Fruit intake | ||||||||||
Fresh fruit | ukb-e-1309_EAS | 2513 | 6 | 3.41 | 0.81 | 13 | 5 | 3.85 | 0.76 | 24 |
Dried fruit | ukb-e-1319_EAS | 2219 | 11 | 7.23 | 3.48 | 40 | 9 | 6.69 | 2.65 | 66 |
Vegetables intake | ||||||||||
Raw vegetables | ukb-e-1299_EAS | 2365 | 3 | 2.83 | 0.36 | 9 | 3 | 2.83 | 0.36 | 14 |
Cooked vegetables | ukb-e-1289_EAS | 2499 | 19 | 10.67 | 7.56 | 71 | 19 | 10.67 | 7.56 | 98 |
Physical activity | ||||||||||
Duration of vigorous activity | ukb-e-914_EAS | 1373 | 4 | 5.13 | 1.48 | 20 | 4 | 5.13 | 1.48 | 42 |
Duration of moderate activity | ukb-e-894_EAS | 1853 | 3 | 3.19 | 0.52 | 10 | 3 | 3.19 | 0.52 | 18 |
Sexual behavior | ||||||||||
Age of initiation | ukb-e-2139_EAS | 1711 | 4 | 5.65 | 1.31 | 18 | 4 | 5.65 | 1.31 | 38 |
No. of sexual partners | ukb-e-2149_EAS | 1559 | 5 | 9.27 | 2.90 | 34 | 5 | 9.27 | 2.90 | 69 |
Sleep behavior | ||||||||||
Insomnia | ukb-e-1200_EAS | 2654 | 18 | 6.93 | 4.03 | 45 | 16 | 5.88 | 3.45 | 77 |
Nap during day | ukb-e-1190_EAS | 2606 | 14 | 6.67 | 3.24 | 38 | 13 | 6.36 | 3.09 | 72 |
Daytime dozing | ukb-e-1220_EAS | 2582 | 16 | 7.11 | 4.25 | 47 | 16 | 7.11 | 4.25 | 85 |
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Zhan, Y.; Ruan, X.; Wang, P.; Huang, D.; Huang, J.; Huang, J.; Chun, T.T.S.; Ho, B.S.-H.; Ng, A.T.-L.; Tsu, J.H.-L.; et al. Causal Effects of Modifiable Behaviors on Prostate Cancer in Europeans and East Asians: A Comprehensive Mendelian Randomization Study. Biology 2023, 12, 673. https://doi.org/10.3390/biology12050673
Zhan Y, Ruan X, Wang P, Huang D, Huang J, Huang J, Chun TTS, Ho BS-H, Ng AT-L, Tsu JH-L, et al. Causal Effects of Modifiable Behaviors on Prostate Cancer in Europeans and East Asians: A Comprehensive Mendelian Randomization Study. Biology. 2023; 12(5):673. https://doi.org/10.3390/biology12050673
Chicago/Turabian StyleZhan, Yongle, Xiaohao Ruan, Pei Wang, Da Huang, Jingyi Huang, Jinlun Huang, Tsun Tsun Stacia Chun, Brian Sze-Ho Ho, Ada Tsui-Lin Ng, James Hok-Leung Tsu, and et al. 2023. "Causal Effects of Modifiable Behaviors on Prostate Cancer in Europeans and East Asians: A Comprehensive Mendelian Randomization Study" Biology 12, no. 5: 673. https://doi.org/10.3390/biology12050673
APA StyleZhan, Y., Ruan, X., Wang, P., Huang, D., Huang, J., Huang, J., Chun, T. T. S., Ho, B. S. -H., Ng, A. T. -L., Tsu, J. H. -L., & Na, R. (2023). Causal Effects of Modifiable Behaviors on Prostate Cancer in Europeans and East Asians: A Comprehensive Mendelian Randomization Study. Biology, 12(5), 673. https://doi.org/10.3390/biology12050673