Genomic Characterization of Aeromonas veronii Provides Insights into Taxonomic Assignment and Reveals Widespread Virulence and Resistance Genes throughout the World
Abstract
:1. Introduction
2. Results
2.1. MLST, TETRA, ANI, and Phylogeny
2.2. Virulence
2.3. Resistance
3. Discussion
4. Materials and Methods
4.1. Genomes from the São Francisco Valley (SFV)
4.2. NCBI Genomes
4.3. São Francisco Valley Genome Assembly
4.4. Plasmids
4.5. Annotation
4.6. Typing and Genomes Classification
4.7. Phylogeny
4.8. Virulence and Resistance Genes Analysis
5. Conclusions
Supplementary Materials
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
References
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ID | Isolates | Isolates | Host | Location | Patient | Plasmids |
---|---|---|---|---|---|---|
B42 | PRJNA590960 | B42_Aer_Pi6_2MC | Phractocephalus hemioliopterus | CODEVASF * | kidney | - |
B44 | PRJNA594379 | B44_Aer_Su2_1AS | Pseudoplatystoma corruscans | CODEVASF * | kidney | Yes |
B45 | PRJNA590964 | B45_Pi_23_1MC | Phractocephalus hemioliopterus | CODEVASF * | kidney | Yes |
B47 | PRJNA590505 | B47_Aer_Pi4_2HPAS | Phractocephalus hemioliopterus | CODEVASF * | kidney | - |
B48 | PRJNA594423 | B48_Aer_Pi5_1HPAS | Phractocephalus hemioliopterus | CODEVASF * | kidney | - |
B52 | PRJNA595563 | B52_Aer_Pi17_ | Phractocephalus hemioliopterus | CODEVASF * | kidney | Yes |
1HPAS | ||||||
B79 | PRJNA590958 | B79_Aer_onGT1 | Oreochromis niloticus | Instituto Federal | kidney | - |
B80 | PRJNA594352 | B80_Aer_ | Environmental (water) | CODEVASF * | Not applicable | - |
WatCTCBM21 | ||||||
MM_B02 | - | MM_B02 | Homo sapiens | Teaching Hospital | Soft tissues infection | - |
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Maia, J.C.d.S.; Silva, G.A.d.A.; Cunha, L.S.d.B.; Gouveia, G.V.; Góes-Neto, A.; Brenig, B.; Araújo, F.A.; Aburjaile, F.; Ramos, R.T.J.; Soares, S.C.; et al. Genomic Characterization of Aeromonas veronii Provides Insights into Taxonomic Assignment and Reveals Widespread Virulence and Resistance Genes throughout the World. Antibiotics 2023, 12, 1039. https://doi.org/10.3390/antibiotics12061039
Maia JCdS, Silva GAdA, Cunha LSdB, Gouveia GV, Góes-Neto A, Brenig B, Araújo FA, Aburjaile F, Ramos RTJ, Soares SC, et al. Genomic Characterization of Aeromonas veronii Provides Insights into Taxonomic Assignment and Reveals Widespread Virulence and Resistance Genes throughout the World. Antibiotics. 2023; 12(6):1039. https://doi.org/10.3390/antibiotics12061039
Chicago/Turabian StyleMaia, José Cleves da Silva, Gabriel Amorim de Albuquerque Silva, Letícia Stheffany de Barros Cunha, Gisele Veneroni Gouveia, Aristóteles Góes-Neto, Bertram Brenig, Fabrício Almeida Araújo, Flávia Aburjaile, Rommel Thiago Jucá Ramos, Siomar Castro Soares, and et al. 2023. "Genomic Characterization of Aeromonas veronii Provides Insights into Taxonomic Assignment and Reveals Widespread Virulence and Resistance Genes throughout the World" Antibiotics 12, no. 6: 1039. https://doi.org/10.3390/antibiotics12061039