Potential Use of Image Analysis in Breeding Programs for Growth and Yield Traits in Meagre (Argyrosomus regius)
Abstract
:1. Introduction
2. Materials and Methods
2.1. Biological Material
2.2. Slaughtering, Image Capturing, and Sampling
2.3. Images Analysis
2.4. Genotyping
2.5. Statistical Data Analysis
3. Results
3.1. Phenotyping
3.2. Heritability and Correlations
4. Discussion
5. Conclusions
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Conflicts of Interest
References
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Housing System | Location | Stock Density | Water Temperature | Water Conditions |
---|---|---|---|---|
Sea cage | Cabo Cope, Águilas (Murcia) | 3.82 Kg/m3 | 20.4 °C (13–28 °C) | Salinity: 34‰; oxygen saturation: 6.4 ppm |
Continental tank | Burriana (Castellón) | 15 Kg/m3 | 21.0 °C (19–23 °C) | Salinity: 36‰; oxygen saturation: 10 ppm |
Trait Category | Trait | Abbreviation | Description |
---|---|---|---|
Area (cNiT) | Total Lateral Area | TLA (cm2) | It corresponds to the outline of the area of the fish. Delimited with a thick blue line in Figure 1. |
Fillet Area | FilA (cm2) | Contour zone of the fish without head or tail. The area from the Y1 axis to Y3 axis. | |
Fillet Area ratio | FilAr | With respect to the total area of the fish. (FilA/TLA) | |
Length (mNiT) | Total Lateral Length | TLL (cm) | From X1 to X4 within the longitudinal axis. |
Fillet Maximum Length | FilML (cm) | From X2 to X3 within the longitudinal axis. | |
Tail Excluded length | TaEL (cm) | From X1 to X3 within the longitudinal axis. | |
Height (mNiT) | Head Height | HeH (cm) | Axis Y1 |
Fish Maximum Height | FMH (cm) | Axis Y2 | |
Shape (mNiT) | Fish Eccentricity | FEc | Describes the degree of ovalness of the fish, excluding the tail. This measurement encompasses the region between X1 and X3. Eccentricity is a ratio between the distance separating the foci of the ellipse and the length of its major axis. An eccentricity of 0 indicates that the fish’s shape is nearly circular, while an eccentricity of 1 suggests that the fish’s shape resembles a straight line. |
Head Eccentricity | HeEc | Describes the degree of ovalness of the fish head, excluding the tail. This measurement encompasses the region between X1 and X2. Eccentricity represents the ratio between the distance separating the foci of the ellipse and the length of its major axis. A value of 0 signifies that the fish’s head shape closely resembles a circle, while a value of 1 indicates that the fish’s head takes on a linear appearance. |
Trait Category | Cage | Tank | Covariate BW | |||
---|---|---|---|---|---|---|
Mean | S.D. | Mean | S.D. | b | S.D. | |
BW (g) | 1267 | 79.1 | 864 | 77.8 | - | - |
TL (cm) | 39.4 | 0.36 | 38.9 | 0.28 | 0.014 | 0.0002 |
Carcass yield (%) | 92.8 | 0.29 | 94.9 | 0.25 | <0.000 | 0.0001 |
Fillet yield (%) | 33.3 | 1.72 | 29.5 | 1.55 | 0.005 | 0.0007 |
TLA (cm2) | 310.7 | 18.7 | 285.7 | 16.06 | 0.193 | 0.0098 |
FilA (cm2) | 204.5 | 14.2 | 180.3 | 11.6 | 0.124 | 0.0088 |
FilAr | 0.64 | 0.008 | 0.63 | 0.007 | <0.000 | <0.0000 |
TLL (cm) | 41.4 | 1.37 | 40.1 | 1.17 | 0.013 | 0.0008 |
FilML (cm) | 23.7 | 0.80 | 22.1 | 0.70 | 0.008 | 0.0004 |
TaEL (cm) | 34.7 | 1.09 | 32.9 | 0.92 | 0.011 | 0.0006 |
HeH (cm) | 9.03 | 0.26 | 8.80 | 0.22 | 0.003 | 0.0001 |
FMH (cm) | 9.89 | 0.29 | 9.47 | 0.25 | 0.004 | 0.0001 |
FEc | 0.95 | 0.001 | 0.94 | 0.001 | <0.000 | <0.0000 |
HeEc | 0.91 | 0.003 | 0.91 | 0.003 | <0.000 | <0.0000 |
Traits | TL | BW | Carcass Yield | Fillet Yield | TLA | FilA | FilAr | TLL | FilML | TaEL | HeH | FMH | FEc | HeEc |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
TL | 0.34 (0.19) | 0.94 (0.00) | 0.25 (0.10) | 0.30 (0.10) | 0.72 (0.04) | 0.70 (0.04) | 0.05 (0.11) | 0.75 (0.04) | 0.72 (0.04) | 0.75 (0.03) | 0.70 (0.04) | 0.73 (0.04) | 0.04 (0.12) | 0.08 (0.13) |
BW | 0.96 (0.15) | 0.39 (0.20) | 0.17 (0.12) | 0.29 (0.11) | 0.71 (0.04) | 0.70 (0.04) | 0.07 (0.12) | 0.70 (0.04) | 0.68 (0.05) | 0.71 (0.04) | 0.71 (0.04) | 0.75 (0.03) | 0.03 (0.38) | 0.03 (0.13) |
Carcass yield | 0.50 (0.60) | 0.44 (0.61) | 0.21 (0.20) | −0.29 (0.10) | 0.03 (0.67) | 0.14 (0.10) | 0.05 (0.10) | 0.19 (0.10) | 0.20 (0.10) | 0.18 (0.10) | 0.11 (0.10) | 0.14 (0.10) | 0.09 (0.11) | −0.03 (0.12) |
Fillet yield | 0.35 (0.66) | 0.40 (0.64) | −0.39 (0.62) | 0.31 (0.22) | 0.17 (0.10) | 0.18 (0.11) | 0.11 (0.11) | 0.14 (0.11) | 0.17 (0.11) | 0.17 (0.09) | 0.19 (0.10) | 0.19 (0.10) | −0.04 (0.12) | −0.04 (0.13) |
TLA | 0.75 (0.43) | 0.74 (0.44) | 0.03 (0.67) | 0.78 (0.35) | 0.32 (0.24) | 0.96 (0.00) | 0.02 (0.10) | 0.96 (0.00) | 0.89 (0.01) | 0.96 (0.00) | 0.89 (0.01) | 0.93 (0.01) | 0.14 (0.09) | −0.03 (0.10) |
FilA | 0.76 (0.41) | 0.74 (0.44) | 0.02 (0.67) | 0.81 (0.31) | 0.97 (0.07) | 0.27 (0.20) | 0.27 (0.09) | 0.92 (0.01) | 0.95 (0.08) | 0.92 (0.01) | 0.79 (0.04) | 0.90 (0.01) | 0.12 (0.09) | −0.21 (0.10) |
FilAr | 0.39 (0.65) | 0.31 (0.67) | 0.19 (0.69) | 0.43 (0.58) | −0.03 (0.72) | 0.35 (0.66) | 0.27 (0.20) | −0.01 (0.10) | 0.40 (0.08) | 0.00 (0.10) | −0.28 (0.10) | 0.01 (0.11) | −0.03 (0.09) | −0.71 (0.04) |
TLL | 0.75 (0.43) | 0.67 (0.50) | 0.06 (0.69) | 0.77 (0.36) | 0.98 (0.05) | 0.94 (0.16) | −0.05 (0.71) | 0.30 (0.19) | 0.92 (0.01) | 0.98 (0.00) | 0.85 (0.03) | 0.89 (0.02) | 0.25 (0.09) | 0.03 (0.11) |
FilML | 0.77 (0.40) | 0.66 (0.50) | 0.03 (0.70) | 0.76 (0.36) | 0.91 (0.21) | 0.96 (0.09) | 0.55 (0.56) | 0.93 (0.17) | 0.35 (0.20) | 0.92 (0.01) | 0.65 (0.07) | 0.79 (0.05) | 0.25 (0.10) | −0.27 (0.10) |
TaEL | 0.77 (0.41) | 0.71 (0.46) | 0.06 (0.70) | 0.77 (0.36) | 0.96 (0.12) | 0.97 (0.06) | 0.03 (0.71) | 0.99 (0.02) | 0.94 (0.13) | 0.29 (0.22) | 0.86 (0.02) | 0.89 (0.02) | 0.29 (0.09) | 0.08 (0.10) |
HeH | 0.63 (0.52) | 0.72 (0.45) | 0.20 (0.68) | 0.87 (0.24) | 0.92 (0.18) | 0.82 (0.32) | −0.26 (0.67) | 0.86 (0.26) | 0.62 (0.51) | 0.87 (0.26) | 0.37 (0.20) | 0.91 (0.01) | −0.02 (0.04) | 0.11 (0.13) |
FMH | 0.74 (0.43) | 0.77 (0.40) | 0.14 (0.69) | 0.87 (0.23) | 0.92 (0.16) | 0.83 (0.31) | −0.21 (0.69) | 0.89 (0.23) | 0.57 (0.53) | 0.89 (0.24) | 0.97 (0.06) | 0.29 (0.21) | −0.05 (0.04) | −0.06 (0.12) |
FEc | 0.19 (0.66) | 0.14 (0.70) | −0.09 (0.65) | −0.50 (0.49) | 0.13 (0.65) | 0.17 (0.64) | 0.16 (0.64) | 0.14 (0.66) | 0.28 (0.63) | 0.19 (0.62) | −0.37 (0.58) | −0.27 (0.61) | 0.15 (0.16) | 0.34 (0.09) |
HeEc | −0.14 (0.69) | −0.05 (0.69) | −0.16 (0.69) | −0.50 (0.54) | −0.10 (0.70) | −0.32 (0.65) | −0.87 (0.25) | −0.11 (0.71) | −0.49 (0.59) | −0.05 (0.69) | 0.00 (0.70) | 0.06 (0.70) | 0.34 (0.57) | 0.21 (0.17) |
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Vallecillos, A.; María-Dolores, E.; Villa, J.; Afonso, J.M.; Armero, E. Potential Use of Image Analysis in Breeding Programs for Growth and Yield Traits in Meagre (Argyrosomus regius). J. Mar. Sci. Eng. 2023, 11, 2067. https://doi.org/10.3390/jmse11112067
Vallecillos A, María-Dolores E, Villa J, Afonso JM, Armero E. Potential Use of Image Analysis in Breeding Programs for Growth and Yield Traits in Meagre (Argyrosomus regius). Journal of Marine Science and Engineering. 2023; 11(11):2067. https://doi.org/10.3390/jmse11112067
Chicago/Turabian StyleVallecillos, Antonio, Emilio María-Dolores, Javier Villa, Juan Manuel Afonso, and Eva Armero. 2023. "Potential Use of Image Analysis in Breeding Programs for Growth and Yield Traits in Meagre (Argyrosomus regius)" Journal of Marine Science and Engineering 11, no. 11: 2067. https://doi.org/10.3390/jmse11112067