Reproductive Characteristics of the Flat Oyster Ostrea denselamellosa (Bivalvia, Ostreidae) Found on the Southern Coast of South Korea
Abstract
:1. Introduction
2. Materials and Methods
2.1. Sampling Collection
2.2. DNA Extraction and DNA Sequencing
2.3. Sequence Alignment and Phylogenetic Analysis
2.4. Histological Analysis
3. Results and Discussion
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
References
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Tax On | Classification | Size (bp) | Accession No. | |
---|---|---|---|---|
Mollusca Bivalvia Pteriomorphia | Mytilus edulis | Mytiloida; Mytiloidea; Mytilidae | 16,740 | AY484747 |
Mytilus galloprovincialis | Mytiloida; Mytiloidea; Mytilidae | 16,744 | AY497292 | |
Mytilus trossulus | Mytiloida; Mytiloidea; Mytilidae | 18,652 | AY823625 | |
Musculista senhousia | Mytiloida; Mytiloidea; Mytilidae | 20,612 | GU001954 | |
Crassostrea angulata | Ostreoida; Ostreoidea; Ostreidae | 18,225 | EU672832 | |
Crassostrea ariakensis | Ostreoida; Ostreoidea; Ostreidae | 18,414 | EU672835 | |
Crassostrea gigas | Ostreoida; Ostreoidea; Ostreidae | 18,225 | EU672831 | |
Crassostrea hongkongensis | Ostreoida; Ostreoidea; Ostreidae | 18,622 | EU672834 | |
Crassostrea iredalei | Ostreoida; Ostreoidea; Ostreidae | 22,446 | FJ841967 | |
Crassostrea sikamea | Ostreoida; Ostreoidea; Ostreidae | 18,243 | EU672833 | |
Saccostrea mordax | Ostreoida; Ostreoidea; Ostreidae | 16,532 | FJ841968 | |
Saccostrea glomerata | Ostreoida; Ostreoidea; Ostreidae | 16,281 | KU310918 | |
Ostrea denselamellosa | Ostreoida; Ostreoidea; Ostreidae | 16,277 | HM015199 | |
Ostrea edulis | Ostreoida; Ostreoidea; Ostreidae | 16,320 | JF274008 | |
Ostrea lurida | Ostreoida; Ostreoidea; Ostreidae | 16,344 | KC768038 | |
Argopecten irradians | Pectinoida; Pectinoidae; Pectinidae | 16,221 | EU023915 | |
Chlamys farreri | Pectinoida; Pectinoidae; Pectinidae | 21,695 | EU715252 | |
Mizuhopecten yessoensis | Pectinoida; Pectinoidae; Pectinidae | 20,414 | AB271769 | |
Placopecten magellanicus | Pectinoida; Pectinoidae; Pectinidae | 32,115 | DQ088274 | |
Mimachlamys nobilis | Pectinoida; Pectinoidae; Pectinidae | 17,963 | FJ415225 | |
Gastropoda Vetigastropoda | Haliotis rubra | Haliotoidea; Haliotidae | 16,907 | NC_005940 |
Gene | Location | Size (bp) | Start Codon | Stop Codon | Intergenic Region * |
---|---|---|---|---|---|
ATP6 | 1–550 | 550 | GTG | CGT | 0 |
trnY | 551–613 | 63 | - | - | 2 |
trnC | 616–678 | 62 | - | - | 36 |
ND2 | 716–1714 | 999 | ATG | TAA | 37 |
trnP | 2336–2399 | 64 | - | - | 621 |
trnL | 2401–2467 | 67 | - | - | 1 |
trnS1 | 2468–2537 | 70 | - | - | 0 |
trnM1 | 2538–2600 | 63 | - | - | 0 |
ATP8 | 2625–2726 | 102 | ATA | TAA | 24 |
trnS2 | 2745–2814 | 70 | 18 | ||
trnM2 | 2821–2883 | 63 | 6 | ||
COX2 | 2889–3585 | 696 | ATG | TAG | 1 |
CYTB | 3587–4747 | 1161 | ATA | TAA | 1 |
trnE | 4745–4812 | 67 | - | - | 8 |
trnT | 4821–4885 | 65 | - | - | 8 |
trnI | 4894–4960 | 67 | - | - | 18 |
COX3 | 4941–5840 | 900 | ATG | TAA | 130 |
trnG | 5971–6037 | 67 | - | - | 8 |
COX1 | 6046–7641 | 1596 | ATG | TAA | 688 |
trnD | 8330–8397 | 68 | - | - | 55 |
trnW | 8453–8515 | 63 | - | - | 60 |
ND4L | 8576–8857 | 282 | GTG | TAA | 1 |
ND1 | 8859–9791 | 933 | ATG | TAA | 78 |
trnA | 9870–9934 | 65 | - | - | 12 |
trnF | 9947–10,013 | 67 | - | - | 2 |
trnL | 10,016–10,081 | 66 | - | - | 2 |
trnK | 10,084–10,148 | 65 | - | - | −1 |
ND3 | 10,148–10,501 | 354 | ATG | TAG | 0 |
trnQ | 10,502–10,567 | 66 | - | - | −1 |
ND6 | 10,579–11,046 | 468 | ATG | TAA | −1 |
ND5 | 11,046–12,716 | 1671 | ATG | TAA | 37 |
l-rRNA | 12,754–14,221 | 1468 | - | - | −660 |
s-rRNA | 13,561–14,488 | 928 | - | - | 0 |
ND4 | 14,495–15,844 | 1350 | ATG | TAA | 24 |
trnH | 15,845–15,907 | 63 | - | - | 24 |
trnV | 15,932–15,999 | 68 | - | - | 24 |
trnR | 16,008–16,074 | 67 | - | - | 4 |
trnN | 16,079–16,147 | 69 | - | - | - |
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Han, J.; Kim, H.-J.; Oh, S.-Y.; Choi, Y.-U. Reproductive Characteristics of the Flat Oyster Ostrea denselamellosa (Bivalvia, Ostreidae) Found on the Southern Coast of South Korea. J. Mar. Sci. Eng. 2022, 10, 1326. https://doi.org/10.3390/jmse10091326
Han J, Kim H-J, Oh S-Y, Choi Y-U. Reproductive Characteristics of the Flat Oyster Ostrea denselamellosa (Bivalvia, Ostreidae) Found on the Southern Coast of South Korea. Journal of Marine Science and Engineering. 2022; 10(9):1326. https://doi.org/10.3390/jmse10091326
Chicago/Turabian StyleHan, Jeonghoon, Han-Jun Kim, Sung-Yong Oh, and Young-Ung Choi. 2022. "Reproductive Characteristics of the Flat Oyster Ostrea denselamellosa (Bivalvia, Ostreidae) Found on the Southern Coast of South Korea" Journal of Marine Science and Engineering 10, no. 9: 1326. https://doi.org/10.3390/jmse10091326
APA StyleHan, J., Kim, H.-J., Oh, S.-Y., & Choi, Y.-U. (2022). Reproductive Characteristics of the Flat Oyster Ostrea denselamellosa (Bivalvia, Ostreidae) Found on the Southern Coast of South Korea. Journal of Marine Science and Engineering, 10(9), 1326. https://doi.org/10.3390/jmse10091326