Metformin Treatment Reduces the Incidence of Rheumatoid Arthritis: A Two-Sample Mendelian Randomized Study
Abstract
:1. Introduction
2. Materials and Methods
2.1. Study Design
2.2. Data sources and SNPs Selection
2.3. Mendelian Randomization Analysis
2.4. Sensitivity Analysis
2.5. Statistical Analysis
3. Results
3.1. Genetic Variant Selection
3.2. Causal Effects of Metformin Treatment on RA
3.3. Sensitivity Analysis
4. Discussion
5. Conclusions
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
References
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Exposure/Outcome | Year | Author | Participants | Number of SNPs | Web Source if Publicly Available |
---|---|---|---|---|---|
Metformin | 2018 | Ben Elsworth [33] | 462,933 individuals (11,552 metformin use cases and 451,381 controls) of European ancestry | 9,851,867 | https://gwas.mrcieu.ac.uk/datasets/ukb-b-14609/ (accessed on 20 December 2022) |
RA | 2014 | Okada Y [34] | 58,284 individuals (14,361 RA cases and 43,923 controls) of European ancestry | 8,747,963 | https://gwas.mrcieu.ac.uk/datasets/ieu-a-832/ (accessed on 20 December 2022) |
SNP | chr | EA | OA | EAF | F | SNP-Metformin Association | SNP-RA Association | ||||
---|---|---|---|---|---|---|---|---|---|---|---|
Beta | SE | p-Value | Beta | SE | p-Value | ||||||
rs10195252 | 2 | C | T | 0.4051 | 33.8179 | −0.0019 | 0.0003 | 6.100 × 10−9 | 0.0101 | 0.0136 | 0.460 |
rs10420309 | 19 | G | A | 0.4375 | 33.4369 | −0.0019 | 0.0003 | 7.400 × 10−9 | 0.0202 | 0.0187 | 0.280 |
rs10965246 | 9 | C | T | 0.1767 | 102.4984 | −0.0043 | 0.0004 | 4.300 × 10−24 | 0.0408 | 0.0186 | 0.028 |
rs11257655 | 10 | T | C | 0.2082 | 47.1683 | 0.0027 | 0.0004 | 6.500 × 10−12 | −0.0202 | 0.0216 | 0.350 |
rs11708067 | 3 | G | A | 0.2424 | 32.9477 | −0.0022 | 0.0004 | 9.500 × 10−9 | 0.0202 | 0.0199 | 0.310 |
rs1215468 | 13 | G | A | 0.2914 | 66.9935 | −0.0029 | 0.0004 | 2.700 × 10−16 | −0.0100 | 0.0340 | 0.770 |
rs13266634 | 8 | T | C | 0.3096 | 52.7446 | −0.0025 | 0.0004 | 3.800 × 10−13 | 0.0392 | 0.0183 | 0.032 |
rs1421085 | 16 | C | T | 0.4035 | 114.2529 | 0.0035 | 0.0003 | 1.100 × 10−26 | −0.0100 | 0.0233 | 0.670 |
rs1496653 | 3 | G | A | 0.2034 | 52.8812 | −0.0029 | 0.0004 | 3.500 × 10−13 | 0.0101 | 0.0418 | 0.810 |
rs17036160 | 3 | T | C | 0.1175 | 38.7915 | −0.0031 | 0.0005 | 4.700 × 10−10 | −0.0619 | 0.0280 | 0.027 |
rs17513135 | 1 | T | C | 0.2275 | 34.7648 | 0.0023 | 0.0004 | 3.700 × 10−9 | −0.0101 | 0.0442 | 0.820 |
rs1800961 | 20 | T | C | 0.0310 | 33.0454 | 0.0054 | 0.0009 | 9.000 × 10−9 | 0.0583 | 0.0465 | 0.210 |
rs2796441 | 9 | A | G | 0.4185 | 31.0899 | −0.0018 | 0.0003 | 2.500 × 10−8 | −0.0101 | 0.0203 | 0.620 |
rs34744311 | 10 | T | C | 0.3773 | 72.5694 | −0.0028 | 0.0003 | 1.600 × 10−17 | −0.0202 | 0.0161 | 0.210 |
rs34872471 | 10 | C | T | 0.2918 | 577.9145 | 0.0086 | 0.0004 | 1.099 × 10−127 | −0.0488 | 0.0188 | 0.009 |
rs459193 | 5 | G | A | 0.7466 | 40.5767 | 0.0024 | 0.0004 | 1.900 × 10−10 | −0.0392 | 0.0228 | 0.086 |
rs4686471 | 3 | C | T | 0.6101 | 32.1655 | 0.0019 | 0.0003 | 1.400 × 10−8 | 0.0101 | 0.0228 | 0.660 |
rs4752792 | 11 | A | G | 0.5445 | 41.5855 | 0.0021 | 0.0003 | 1.100 × 10−10 | 0.0296 | 0.0236 | 0.210 |
rs4932264 | 15 | C | T | 0.7296 | 36.9493 | −0.0022 | 0.0004 | 1.200 × 10−9 | −0.0198 | 0.0240 | 0.410 |
rs67232546 | 11 | T | C | 0.2125 | 32.6216 | 0.0023 | 0.0004 | 1.100 × 10−8 | −0.0202 | 0.0212 | 0.340 |
rs6769511 | 3 | C | T | 0.3158 | 83.6027 | 0.0032 | 0.0003 | 6.001 × 10−20 | −0.0198 | 0.0216 | 0.360 |
rs7177055 | 15 | A | G | 0.7175 | 39.2887 | 0.0022 | 0.0004 | 3.700 × 10−10 | −0.0101 | 0.0252 | 0.690 |
rs72802357 | 16 | T | C | 0.0781 | 44.5496 | −0.0040 | 0.0006 | 2.500 × 10−11 | 0.0677 | 0.0283 | 0.017 |
rs73188924 | 22 | A | C | 0.2248 | 31.1092 | 0.0022 | 0.0004 | 2.400 × 10−8 | −0.0202 | 0.0322 | 0.530 |
rs7482891 | 11 | G | A | 0.6221 | 42.3038 | −0.0022 | 0.0003 | 7.800 × 10−11 | 0.0101 | 0.0252 | 0.690 |
rs7756992 | 6 | G | A | 0.2664 | 76.4924 | 0.0032 | 0.0004 | 2.200 × 10−18 | 0.0101 | 0.0122 | 0.410 |
rs780093 | 2 | C | T | 0.6152 | 38.6220 | 0.0021 | 0.0003 | 5.100 × 10−10 | 0.0101 | 0.0133 | 0.450 |
rs849142 | 7 | C | T | 0.5051 | 54.9143 | −0.0024 | 0.0003 | 1.300 × 10−13 | 0.0202 | 0.0179 | 0.260 |
rs8756 | 12 | A | C | 0.5176 | 33.9234 | 0.0019 | 0.0003 | 5.700 × 10−9 | −0.0305 | 0.0164 | 0.063 |
rs947791 | 11 | A | G | 0.2176 | 34.0158 | 0.0023 | 0.0004 | 5.500 × 10−9 | −0.0202 | 0.0230 | 0.380 |
rs987237 | 6 | G | A | 0.1796 | 33.1730 | 0.0024 | 0.0004 | 8.400 × 10−9 | 0.0305 | 0.0300 | 0.310 |
rs9957264 | 18 | A | C | 0.1665 | 36.4231 | −0.0026 | 0.0004 | 1.600 × 10−9 | 0.0198 | 0.0191 | 0.300 |
Method | p-Value | OR | LCI | UCI |
---|---|---|---|---|
MR Egger | 0.086 | 0.0034 | 6.4266 × 10−6 | 1.7990 |
WM | 0.003 | 0.0035 | 8.8251 × 10−5 | 0.1423 |
IVW | 0.006 | 0.0232 | 1.6046 × 10−3 | 0.3368 |
Simple mode | 0.094 | 0.0009 | 2.9682 × 10−7 | 2.6077 |
Weighted mode | 0.004 | 0.0017 | 3.0310 × 10−5 | 0.0975 |
MR-Egger | MR-PRESSO | Cochran’s Q Test | |||
---|---|---|---|---|---|
Estimates | SE | p-Value | Global Test p-Value | Q | p-Value |
0.0065 | 0.0098 | 0.511 | 0.120 | 40.812 | 0.112 |
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Liang, J.; Cai, Y.; Zhang, J.; Jing, Z.; Lv, L.; Zhang, G.; Zhang, R.; Liu, R.; Nan, K.; Dang, X. Metformin Treatment Reduces the Incidence of Rheumatoid Arthritis: A Two-Sample Mendelian Randomized Study. J. Clin. Med. 2023, 12, 2461. https://doi.org/10.3390/jcm12072461
Liang J, Cai Y, Zhang J, Jing Z, Lv L, Zhang G, Zhang R, Liu R, Nan K, Dang X. Metformin Treatment Reduces the Incidence of Rheumatoid Arthritis: A Two-Sample Mendelian Randomized Study. Journal of Clinical Medicine. 2023; 12(7):2461. https://doi.org/10.3390/jcm12072461
Chicago/Turabian StyleLiang, Jialin, Yuanqing Cai, Jianan Zhang, Zhaopu Jing, Leifeng Lv, Guangyang Zhang, Rupeng Zhang, Ruiyu Liu, Kai Nan, and Xiaoqian Dang. 2023. "Metformin Treatment Reduces the Incidence of Rheumatoid Arthritis: A Two-Sample Mendelian Randomized Study" Journal of Clinical Medicine 12, no. 7: 2461. https://doi.org/10.3390/jcm12072461
APA StyleLiang, J., Cai, Y., Zhang, J., Jing, Z., Lv, L., Zhang, G., Zhang, R., Liu, R., Nan, K., & Dang, X. (2023). Metformin Treatment Reduces the Incidence of Rheumatoid Arthritis: A Two-Sample Mendelian Randomized Study. Journal of Clinical Medicine, 12(7), 2461. https://doi.org/10.3390/jcm12072461