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Article

A Low-Cost, Repeatable Method for 3D Particle Analysis with SfM Photogrammetry

1
School of Biological, Earth and Environmental Sciences, University College Cork, T12 YN60 Cork, Ireland
2
Department of Geosciences, Penn State University, University Park, PA 16801, USA
3
School of Mathematical Sciences, University College Cork, T12 YN60 Cork, Ireland
4
Department of Geography, University College Cork, T12 YN60 Cork, Ireland
5
Environmental Research Institute, University College Cork, Lee Road, T12 YN60 Cork, Ireland
*
Author to whom correspondence should be addressed.
Geosciences 2023, 13(7), 190; https://doi.org/10.3390/geosciences13070190
Submission received: 4 May 2023 / Revised: 7 June 2023 / Accepted: 20 June 2023 / Published: 22 June 2023
(This article belongs to the Section Sedimentology, Stratigraphy and Palaeontology)

Abstract

:
The characterisation of particle shape is an important analysis in the field of sedimentary geology. At finer scales, it is key for understanding sediment transport while at coarser scales, such as boulders, it is vital for coastal protection. However, the accurate characterisation of particle shape is restricted by the application of 2D imaging for 3D objects or expensive and time-consuming 3D imaging methods such as X-ray tomography or laser scanning. This research outlines a low-cost, easy-to-use 3D particle imaging and shape characterisation methodology employing structure-from-motion (SfM) photogrammetry. A smartphone device was used to capture 2D images of pebble/cobble-sized samples, which were converted to 3D image models using SfM. The 3D image models were then analysed using a comprehensive set of 16 size and shape parameters. Furthermore, a minimum resolution, independent of particle size, is proposed here for the 3D image models for reliable and reproducible size and shape analysis. Thus, the methodology presented here for 3D particle imaging and size and shape analysis can be translated for a range of particle sizes. This work thus opens a pathway for the use of readily accessible imaging devices, such as smartphones, to flexibly obtain image data both in situ as well as in laboratories, thus providing an immensely powerful tool for research and teaching.

1. Introduction

Particle shape quantification is an important analysis carried out in a range of geological disciplines such as sedimentary geology [1], volcanology [2,3], geomorphology [4], structural geology [5], and petrology [6]. In sedimentary geology, shape quantification has been used as a tool to decipher the origin, transport, and deposition history of sedimentary particles. Examples of particle shape analysis applications in recent sedimentary research include discrimination of the sedimentary depositional environment [7,8,9,10,11], textural maturity analysis [11], bedload transport [12,13], Martian geology [14,15], bulk rock property [16,17], and provenance analysis of zircon grains [18].
The methodology for particle shape analysis has substantially evolved over one century [1,19,20]. Earlier attempts at shape quantification used a manual approach and were thus tedious and time consuming in nature (e.g., [21,22]). Visual comparison charts were introduced as a result to simplify the analysis [23,24]. However, shape characterisation based on visual charts suffers from user bias and reproducibility [25,26]. In the last two decades, there has been significant development in the field of automated quantitative shape analysis methodology [4,20,27,28,29,30,31].
Quantitative particle shape analysis is usually carried out in either 2D or 3D [1,19,20]. Methods of 2D shape analysis require optimal imaging based on particle size (e.g., digital cameras for gravel, digital microscopes for sand, and SEM for silt/clay/sand fractions). On the other hand, laser scanning and X-ray computed tomography have been frequently used for 3D imaging of particles in engineering disciplines (e.g., [32,33,34,35]). Three-dimensional imaging of particles provides several pieces of additional physical information regarding morphology (and material properties in the case of X-ray tomography). However, laser scanning and X-ray tomography techniques have been rarely used in sedimentary research, possibly due to costly and time-consuming methods of image acquisition and processing. Therefore, most of the recent geoscience research either uses 2D shape analysis [9,11,18,36,37,38,39] or proposes techniques for 2D shape analysis [3,4,31,40,41,42]. An alternative methodology that can be used for obtaining 3D data is photogrammetry.
Photogrammetry is the process of making direct measurements from photographic data. Structure-from-motion (SfM) is a particular branch of photogrammetry that, like stereoscopic photogrammetry, allows the 3D structure of objects of interest to be resolved/reconstructed through a series of overlapping but offset images [43]. Given the low cost and user-friendliness of the method in commercially available software, SfM photogrammetry has recently gained considerable interest. The method relies largely on the scale-invariant feature transform (SIFT) algorithm [44] which allows features in overlapping but offset images to be detected. The method has been successfully applied in terrestrial geomorphology as well as in deep marine environments owing to the repeatability of the method [45,46,47,48]. Moreover, when SfM is applied systematically as in archaeological studies with >60% image overlap (e.g., [49,50,51]), remarkably detailed 3D reconstructions can be generated.
Due to a dearth of studies in sedimentary geology adopting photogrammetry-based 3D particle analysis methodology, wider practical applications (e.g., sedimentary fabric analysis) remain elusive. Researchers in engineering disciplines have made some progress in this direction (e.g., [35,52]). However, there is still a lack of studies applying 3D photogrammetry to sedimentary particles for obtaining sedimentary geology-oriented 3D shape analysis. Furthermore, there is currently a lack of research directed towards the minimum resolution required for 3D shape and size characterisation. This work aims to introduce a 3D photogrammetry and particle shape analysis methodology. In this context, the objectives of this research are to:
  • Present a cheap, fast, and reproducible methodology for obtaining high-quality 3D particle data using SfM-photogrammetry;
  • Characterise sedimentary particle shape and size using the obtained 3D photogrammetry data;
  • Determine the minimum resolution required for 3D shape and size characterisation.
The next section describes the samples used in this study followed by details of the methodology. The workflow for 3D imaging presented here facilitates a cheap and readily accessible technique that can be utilised flexibly by users.

2. Materials and Methods

This study utilises sedimentary particles as well as the man-made reference samples described below (Section 2.1). The methodology used to analyse the samples includes SfM photogrammetry (Section 2.2), particle shape and size analysis (Section 2.3), and determination of minimum required image resolution (Section 2.4).

2.1. Samples Used

In this study, we used a total of 16 sample objects consisting of 13 clasts (S1–S13) from the beach environment and 3 reference materials (S14–S16, see Figure 1). The beach samples were collected from Cushendun Beach, Co. Antrim, Northern Ireland (55°7′54″ N, 06°2′26″ W). The clasts consisted of micro-granite and schist from the Dalradian supergroup [53]. The pebble/cobble-sized clasts were selected to provide as much natural variation in sedimentary particle shape as possible.
Additionally, the following three reference materials were used in this study: (1) S14—a match box, (2) S15—a chopping board, and (3) S16—a pen. The three reference materials: S14, S15, and S16 provide an analogue for cuboid, platy, and rod shapes, respectively. Next, SfM photogrammetry of the samples is described.

2.2. Structure from Motion Photogrammetry

A systematic SfM method was applied to a series of clasts and common household objects. The systematic method utilised herein can be divided into three steps: survey set-up, image acquisition, and data processing. For the survey set-up, all objects are placed on a homogenously lit-up stage. The stage is approx. 30 cm × 30 cm. To achieve homogenous lighting across the stage, four lighting sources were placed approx. 90 degrees from each other, centred around the stage, and utilised. The stage was then subsequently marked with four points ( a ,   b ,   c ,   and   d ). The distance between each point was measured for the purpose of scaling the model during processing.
Given that the full surface of the model is required to be reconstructed, the object is imaged in two overlapping segments (Figure 2). Accordingly, for the image acquisition step, the object of interest was secured to the centre of the stage with modelling putty. The object was aligned with its longest axis ( L ) aligned vertically. Images were acquired approx. every 10 degrees (minimum) around the centre of the object. The camera was pointed obliquely towards the centre of the object for each image acquired. Each image also included the full stage where points a to d were included. A minimum of three of these points were visible in all images. The camera utilised during acquisition was from a Huawei P30 Pro which has three main lenses. The specifications of the lens utilised for this research are 40 MP, f/1.6, 27 mm. The images were acquired as *.raw which were subsequently converted to *.jpeg. Once completed, the object was removed from the stage and the model was turned ‘upside-down’ where the process was repeated resulting in two sets of image data for each ‘side’ of the object. This was to ensure that image data from the full surface of the object were acquired. Image position did not appear to have a considerable impact on the final point cloud. However, a systematic image acquisition survey was followed to ensure consistency in the results.
All data were imported to Agisoft Metashape (www.agisoft.com (accessed on 4 May 2023)). Each of the two image sets from the model was imported separately (referred to as ‘chunks’ in Agisoft) to the same project. The process of image alignment was completed separately for each chunk. The settings utilised were ‘highest’ for accuracy, generic preselection, a key point limit of 20,000, and a tie point limit of 2000. When creating dense clouds, the ‘Ultra high’ quality was chosen for each. Clear, obvious features on the surfaces of the object such as cracks, fractures, mineral grains, and colour changes were identified and manually highlighted by adding point markers in Agisoft on the object from both image sets. The two image sets were subsequently automatically merged using the Align Chunks tool based on the identified markers. This essentially stitches both sets of images together using the known position of common features that were manually added. Once merged, points a to d were then used to scale the reconstruction. Subsequently, the stages and surrounding artefacts within the models could be removed via manual selection or selection and removal based on pixel colour, similar to the process utilised by [46,54,55]. A final dense cloud reconstruction was generated of the completed model and the resultant triangular mesh file was exported as a standard *.obj file format. This mesh model (from *.obj file) will be subsequently referred to as a “3D model” in this paper. The SfM photogrammetry process was repeated for each sample. The 3D models can be alternatively exported in *.xyz file formats or a range of GIS-friendly file formats based on user preference.

2.3. Shape and Size Parameters

A 3D model when referenced to physical dimensions can be used for calculating the actual size of the sample. Otherwise, the calculated length measurements will be in voxel units which would be devoid of physical sense. To give an example, a digital 3D cube of 10 voxel units in length on each side can represent a physical cube of any size—50 mm or 50 cm, or even 50 km unit length. In this study, all the 3D models are referenced to physical dimensions and scaled to metre units. A Mathematica (https://www.wolfram.com/mathematica/ (accessed on 4 May 2023)) script was developed by the authors to calculate the size and shape parameters (See Supplementary Data: File S1). A total of 16 commonly used sedimentary size and shape parameters described in Table 1 were implemented in this study.
There are various methods of calculating particle size in 3D [1]. In this paper, a minimum volume cuboid (see Figure 3D) is fitted over a particle. The fitted cuboid’s length, width, and height are calculated as the size of particle’s three axes ( L , I and S , respectively—Table 1 (1)). It is to be noted that the cuboid is oriented along the particle as opposed to being oriented along the Cartesian axes. In this study, the best-fit cuboid was computed using the in-built Mathematica function BoundingRegion (with MinOrientedCuboid option).
Altogether 15 shape parameters are used in this study (Table 1 (2 to 16)). A subset of the shape parameters (Table 1 (2 to 11)) can be calculated using the particle’s three axes ( L ,   I ,   and   S ). These shape parameters are flatness ( F ), elongation ( E ), Wentworth flatness index ( W F I ), Krumbein intercept sphericity ( K I S ), Corey shape factor ( C S F ), maximum projection sphericity ( M P S ), Aschenbrenner working sphericity ( A W S ), Aschenbrenner shape factor ( A S F ), Janke form factor ( J F F ), and the oblate–prolate index ( O P I ). These 10 shape parameters were compared with each other in a review study by [1].
Additionally, five commonly used shape parameters: solidity ( S O L ), circularity ( C I R ), volume sphericity ( V S P ), diameter sphericity ( D S P ), and surface area sphericity ( S A S ) were implemented in this study (see Table 1 (12 to 16)). The following geometrical measurements were required to compute the abovementioned shape parameters: particle volume, particle surface area, convex hull over the particle, and the smallest circumscribing sphere over the particle. The volume of the particle from its mesh was calculated by integrating the volume of each tetrahedron formed by joining the individual mesh triangles with the origin [68]. On the other hand, particle surface area, minimum bounding sphere, and convex hull were computed using the in-built Mathematica functions RegionMeasure, BoundingRegion (with MinBall option), and ConvexHullMesh, respectively.
Figure 3 shows a particle (S10, Figure 1) with its resultant 3D model, 3D point cloud, best-fit-oriented cuboid, smallest bounding sphere, and 3D convex hull. The shape and size parameters implemented in the Mathematica script were tested using a simulated cube (See Supplementary Data: File S2).

2.4. Minimum Resolution

Any particle image, whether in 2D or 3D, must have a sufficient image resolution to reliably carry out size and shape analysis [3,42,69,70]. Therefore, a minimum image resolution ought to be determined for the 3D imaging methodology discussed here. The readers are reminded that a 3D image can represent a physical particle of any given size. Hence, scaling of image resolution is necessary to compare the 3D image resolution of particles of varying physical sizes. In this study, the scaled resolution ( S R ) of a particle’s 3D image is defined here as:
S R = N p / S A n
where N p is the number of unique points in the particle’s 3D point cloud. In Mathematica, the 3D point cloud is generated using the vertices of the triangular mesh of the 3D model. S A n is the normalised surface area of the particle. The normalised surface area is defined here as:
S A n = S A / L 2
where S A is the particle surface area and L is the longest axis of the particle. Since S A n is the normalised surface area, it is dimensionless. Hence, the S R is measured in point units. The normalisation of surface area with respect to the particle size ( L ) ensures that 3D image resolutions of particles with varying physical size are comparable. In its 2D analogue, calliper length has been successfully used earlier to normalise particle size [42]. 3D models of three samples (sample S8, sample S10 and sample S14) were imported to CloudCompare (https://www.danielgm.net/cc/ (accessed on 4 May 2023)), a piece of open-source point cloud and mesh data processing software. Here, models were resampled to varying scaled resolution and exported to analyse for variation in resultant shape parameter values. This study determines the minimal scaled resolution required for a 3D model to perform reproducible 3D particle shape analyses. The results of the above-discussed methodologies are presented along with a discussion in the next section.

3. Results

The samples shown in Figure 1 were imaged following the methodology described in Section 2.2. The resultant 3D models for the corresponding 16 samples are presented in Figure 4. The 3D models were created with scaled resolution of greater than 4800 points in each model.
The 3D image models were imported into Mathematica (as *.obj files) to compute the size and shape parameters (Table 1). Since the 3D models were scaled to physical dimensions in meters, it was possible to measure the physical size of the samples. The long axis ( L ) of the samples vary from 5.31 cm (S14) to 51.6 cm (S15), the intermediate axis ( I ) is in the range 1.62 cm (S16) to 29.36 cm (S15) and the short axis ( S ) varies within 1.22 cm (S16) to 9.62 cm (S8) range.
With the three axes calculated, the axis ratios result in particle shape parameters—flatness ( S / I ) and elongation ( I / L ). Lower values of flatness and elongation indicate flatter and more elongated sample respectively, and vice versa. Sample 15 (chopping board) depicted the lowest flatness value of 0.08, whereas the highest flatness value of 0.98 was displayed by sample 4. In case of elongation, sample 16 (pen) shows the lowest value of 0.11, whereas sample 8 depicts the highest elongation value of 0.99. The distribution of all the 16 samples on a flatness ( S / I ) versus elongation ( I / L ) bivariate plot is presented as Zingg’s diagram [71] in Figure 5. The shape parameters which rely on the particle size dimensions ( S , I , L ) can be displayed on the Zingg’s diagram [1]. Thus, in Figure 5, the curves of the following shape parameters are plotted on the Zingg’s diagrams to represent the sample shape variation: Wentworth flatness index ( W F I ), Krumbein intercept sphericity ( K I S ), Corey shape factor ( C S F ), maximum projection sphericity ( M P S ), Aschenbrenner working sphericity ( A W S ), Aschenbrenner shape factor ( A S F ), Janke form factor ( J F F ) and Oblate–Prolate index ( O P I ). The distribution of the sample values for the remaining five shape parameters—solidity ( S O L ), circularity ( C I R ), volume sphericity ( V S P ), diameter sphericity ( D S P ), and surface area sphericity ( S A S ) is displayed in Figure 6.
Figure 7 shows the values of the shape parameters (elongation, flatness, solidity, circularity, volume sphericity, diameter sphericity, and surface area sphericity) with respect to the variation in scaled resolution for sample 8, 10, and 14. There is a noticeable variation in the shape parameter values for the three samples below the scaled resolution of 2000 points, whereas the 3D image models above 2000 points display consistent shape parameter values. Therefore, a minimum resolution of 2000 points is recommended to be used when building 3D image models for shape analysis.

4. Discussion

4.1. Cheap, Fast, and User-Friendly Methodology

The methodology presented for 3D imaging in this paper is user-friendly as well as cost-effective. For example, the only costs incurred were fieldwork expenses (travel) and software. Images of many objects can be easily acquired using basic optical cameras, and given the availability of camera-bearing smartphones, image data can be captured with relative ease. Such image data, notably those from smartphones, are ordinarily geotagged with the smartphone GPS position while some smartphones even include local camera angle data. In this study, image data were acquired with a relatively common mobile phone camera. Post-processing of these image data with the SfM workflow can produce point clouds and full 3D models using several forms of software, including commercial (e.g., Agisoft Metashape and Pix 4D) and opensource (e.g., MicMap and VisualSFM) options. Readers interested in a comparison of the different approaches and/or software used for SfM photogrammetry are referred to [45]. Several computational tools and programming languages (e.g., Python, Octave, Matlab, and Mathematica) can be used to calculate the size and shape parameters from the 3D image models. In terms of time, the process of creating 3D models and analysing size and shape with the method utilised herein is relatively fast (<1 h each).

4.2. Particle Shape and Size Analysis

The sedimentary samples analysed in this study were selected to represent variation in naturally occurring clasts. This included angular- to rounded- and cylindrical- to spherical-shaped clasts. Furthermore, three reference samples (S14—a matchbox, S15—a chopping board, and S16—a pen) depicting cuboid-, platy-, and rod-shaped were used in the analysis. The SfM photogrammetry, shape, and size analysis methodology used in this study performs according to expectations. Sample S8, which is visually the most equidimensional and spherical clast, results in the highest value for Krumbein intercept sphericity, Aschenbrenner working sphericity, Janke form factor, circularity, volume sphericity, diameter sphericity, and surface area sphericity. On the other hand, samples S15 (platy-shaped) and S16 (rod-shaped) depict the lowest values for Krumbein intercept sphericity, Aschenbrenner-working sphericity, maximum projection sphericity, circularity, volume sphericity, diameter sphericity, and surface area sphericity. Using solidity parameters, a sample with indentations and rough corners (S6) can be distinguished from a sample with a smooth surface devoid of any indentation.
It is to be noted that differently shaped parameters display different ranges of values for the same sample set even though they represent sphericity and fall within the overall 0–1 theoretical range. For example, the sample values for volume sphericity lie within 0.01–0.58, whereas for surface area sphericity, they are 0.26–0.94 (see Figure 6). This is due to the definition of individual shape parameters being sensitive to different physical aspects of a measured sample.
The scatter of sample values in the Zingg’s plot (Figure 5) corresponds well to the corresponding Zingg’s plot by [1]. For example, sample S15 (chopping board) and S16 (pen) lie in a similar region in Figure 5 as compared to the pen and slate plotted by [1]. Similarly, future studies involving 3D particle shape analysis can leverage the visual depiction of the different samples along with their numerical values for comparison as shown in Figure 5 and Figure 6 of this study.

4.3. Three-dimensional Model Resolution

Imaging methods need to have a minimum resolution defined for reproducible particle shape and size analysis. For optical-image-based 2D shape analysis, several studies have identified minimum resolution for shape quantification [42,69,70,71,72]. Similarly, there are studies that have investigated the effect of computed tomography (CT) image voxel resolution on the estimation of rock properties [73,74]. However, there is a lack of research on the effect of image resolution on 3D shape analysis in the case of SfM photogrammetry. This study defines a resolution metric, i.e., scaled resolution for 3D models obtained from SfM photogrammetry. A minimum scaled resolution of 2000 points is estimated for accurately calculating the 3D shape and size parameters implemented in this paper. The minimum model resolution is an important step forward towards standardising SfM photogrammetry for 3D shape and size analysis. Furthermore, it will be vital in applying the photogrammetry and shape analysis methodology for varying sample sizes (see Section 4.5) as well as decreasing the time and high-specification computational requirements to generate overly detailed 3D models.

4.4. Comparison with other Methods

While manual measurement of particle size is quick and easy to perform, measurement of 3D particle shape manually suffers from particular limitations. Physical parameters such as surface area and volume are tedious and sometimes impractical to calculate using manual methods. Therefore, 3D particle shape analysis has been, until recently, limited to the calculation of shape parameters dependent solely on the principal axes’ measurement (see Table 1 (2 to 11)). The user-friendly and cheap 3D photogrammetry presented here can empower users to not only calculate the size and shape parameters used here but also perform complex shape analysis. For example, spherical harmonics analysis [75,76] can be performed on the point cloud data of the 3D models.
The SfM photogrammetry technique described in this paper renders surficial 3D information. On the other hand, X-ray computed tomography (CT) has been used in the past for internal as well as surficial 3D data. The major difference between the two techniques is the type of data obtained using each technique, i.e., optical for SfM photogrammetry versus X-ray attenuation index for computed tomography. Thus, it is possible to obtain information about the internal structure and material properties of a particle using CT imaging. In contrast, obtaining internal material and structure information of a particle is out of the scope of the methodology described here.
While SfM photogrammetry requires a cheap and readily available digital camera to obtain images, the instrumentation cost is much higher for CT scanning (>100 k USD) when compared to the method carried out herein (common mobile phone, ~500 Euro; Agisoft educational licence approx. ~500 Euro). It is worth noting that the SfM photogrammetry workflow can be carried out in a number of open-source software packages such as MicMap (French National Geographic Institute; https://micmac.ensg.eu/ (accessed on 4 May 2023)) and VisualSFM (http://ccwu.me/vsfm (accessed on 4 May 2023)). Image acquisition for SfM photogrammetry can be performed anywhere—in the field as well as in a laboratory setting. On the other hand, due to the instrumentation involved, CT scanning is restricted to the laboratory setting. In summary, CT scanning ought to be used where particle material or internal structure information is required, and SfM photogrammetry provides a cheap and flexible option for particle shape analysis.

4.5. Applications beyond Hand-Held Samples

The SfM photogrammetry approach can be applied to images and analyses sand-sized particles [52]. This study provides a reference for the minimum model resolution to be used to perform particle shape analysis. Future work entails benchmarking SfM photogrammetry methodology for 3D imaging of sand-sized particles using microphotograph images. The scaled resolution proposed and defined in this study will be essential in making sure any such study encompasses the minimum model resolution for particle characterisation.
There are several avenues for the application of 3D shape and size analysis of sedimentary particles such as investigating the depositional environment [77], bedload transport [12], and bulk rock properties [16,17]. Furthermore, once standardised for microscale applications, 3D imaging and morphological analysis can be applied to microfossils. There is an active interest in developing imaging and automatic recognition software for microfossils such as foraminifera [78,79] for research and industrial applications. On the other hand, larger boulders and immovable objects could also be imaged in the field for subsequent processing and analysis in the laboratory [80,81]. This study provides a solid foundation for extending 3D photogrammetry applications to samples of varying sizes and for a variety of research objectives.
In recent years, 3D printing has been used for geological research and teaching [82,83,84]. Using the SfM photogrammetry method, 3D models can be easily created for the 3D printing of geological specimens. Three-dimensional particle shape information can be used for numerical studies involving DEM [85]. Furthermore, surface roughness in granular matter can be studied using the 3D models generated by SfM photogrammetry. Thus, 3D particle imaging and processing using SfM provides a powerful, cheap, and versatile tool that can be applied for numerous applications within geoscientific disciplines.

5. Conclusions

This study presents a low-cost, versatile methodology for 3D imaging of particles using SfM photogrammetry. Using a readily available smartphone device, multiple 2D images were captured and processed to construct 3D image models of a total of 16 samples (13 natural and 3 man-made reference samples). A comprehensive set of 16 commonly used size and shape parameters were computed for the samples. The variation in the results provides an expected range of values for the shape parameters for natural samples which can be used as a reference for future 3D shape analysis studies.
This study develops a concept of minimum scaled resolution, independent of particle size, for 3D shape analysis. Scaled resolution is thus proposed here as the number of unique points in a 3D model point cloud divided by the normalised surface area of the 3D model. For the size and shape parameters used in this study, a minimum scaled resolution was determined as 2000 points. Thus, samples with particle sizes ranging from sand to a boulder can be all compared for various 3D shape parameters when they are imaged above the minimum scaled resolution.
In academia, a range of scientific disciplines (e.g., geosciences, biological sciences, and civil engineering) will benefit from the 3D shape and size methodology proposed here. Additionally, 3D shape and size analysis is of immense interest to our colleagues in industry for commercial applications (e.g., the construction and material industries). Therefore, the methodology presented in this study hopes to open avenues for various applications of 3D particle imaging and characterisation.

Supplementary Materials

The following supporting information can be downloaded at: https://www.mdpi.com/article/10.3390/geosciences13070190/s1, File S1: Mathematica code for 3D size and shape analysis, File S2: cube simulation and analysis file for testing the code, and File S3: Results which include all the raw data for results of Samples 1–16.

Author Contributions

Conceptualisation, M.T. and A.L.; methodology, M.T. and A.L.; software, M.T.; validation, M.T.; formal analysis, M.T. and A.L.; investigation, M.T. and A.L.; resources, M.T. and A.L.; data curation, M.T. and A.L.; writing—original draft preparation, M.T. and A.L.; writing—review and editing, M.T. and A.L.; visualisation, M.T. and A.L. All authors have read and agreed to the published version of the manuscript.

Funding

This research received no external funding.

Data Availability Statement

Computational codes and results from this study are available in the Supplementary Materials. Any further data will be made available upon request.

Conflicts of Interest

The authors declare no conflict of interest.

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Figure 1. Sample images S1–S16 for the 16 samples used in the study. S1–S13 are natural samples. S14, S15, and S16 are a matchbox, a chopping box, and a pen representing a cuboid, a platy, and a rod shape, respectively. The white line refers to a 1 cm scale.
Figure 1. Sample images S1–S16 for the 16 samples used in the study. S1–S13 are natural samples. S14, S15, and S16 are a matchbox, a chopping box, and a pen representing a cuboid, a platy, and a rod shape, respectively. The white line refers to a 1 cm scale.
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Figure 2. Schematic of camera position relative to the object of interest to achieve sufficient (>60%) overlap for the structure from motion processing utilised for this study.
Figure 2. Schematic of camera position relative to the object of interest to achieve sufficient (>60%) overlap for the structure from motion processing utilised for this study.
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Figure 3. Figure showing different steps for shape and size calculation. (A) Sample S10 (from Figure 1); (B) resultant 3D model; (C) 3D point cloud; (D) minimum oriented cuboid over the sample; (E) smallest bounding sphere over the sample; and (F) 3D convex hull of the sample.
Figure 3. Figure showing different steps for shape and size calculation. (A) Sample S10 (from Figure 1); (B) resultant 3D model; (C) 3D point cloud; (D) minimum oriented cuboid over the sample; (E) smallest bounding sphere over the sample; and (F) 3D convex hull of the sample.
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Figure 4. Three-dimensional models for samples S1–S16. The 3D models along with their position and orientation correspond to the sample images from Figure 1.
Figure 4. Three-dimensional models for samples S1–S16. The 3D models along with their position and orientation correspond to the sample images from Figure 1.
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Figure 5. Three-dimensional models of samples 1–8 in the inlet on right and samples 9–16 on the left. Sample values on the Zingg’s scatter for S/I versus I/L plot along with contour of: (A) Wentworth flatness index; (B) Krumbein intercept sphericity; (C) Corey shape factor; (D) maximum projection sphericity; (E) Aschenbrenner working sphericity; (F) Aschenbrenner shape factor; (G) Janke form factor; (H) Oblate–Prolate Index.
Figure 5. Three-dimensional models of samples 1–8 in the inlet on right and samples 9–16 on the left. Sample values on the Zingg’s scatter for S/I versus I/L plot along with contour of: (A) Wentworth flatness index; (B) Krumbein intercept sphericity; (C) Corey shape factor; (D) maximum projection sphericity; (E) Aschenbrenner working sphericity; (F) Aschenbrenner shape factor; (G) Janke form factor; (H) Oblate–Prolate Index.
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Figure 6. Three-dimensional models of samples 1–8 in the inlet on the right and samples 9–16 on the left. Sample values for solidity, circularity, volume sphericity, diameter sphericity, and surface area sphericity.
Figure 6. Three-dimensional models of samples 1–8 in the inlet on the right and samples 9–16 on the left. Sample values for solidity, circularity, volume sphericity, diameter sphericity, and surface area sphericity.
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Figure 7. Values for samples S8, S10, and S14 measured at varying scaled resolutions for the shape parameters: (A) S/I; (B) I/L; (C) solidity; (D) circularity; (E) volume sphericity; (F) diameter sphericity; and (G) surface area sphericity.
Figure 7. Values for samples S8, S10, and S14 measured at varying scaled resolutions for the shape parameters: (A) S/I; (B) I/L; (C) solidity; (D) circularity; (E) volume sphericity; (F) diameter sphericity; and (G) surface area sphericity.
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Table 1. Size and shape parameters used in this study.
Table 1. Size and shape parameters used in this study.
ParameterFormulaRangeRemarks/Reference
Size
1Long Axis L 0 to ∞ The three axes of the particle are measured as the length of the three sides of the best-fit-oriented cuboid over the particle [1]
Intermediate Axis I 0 to L
Short Axis S 0 to I
Shape
2Flatness (F) S I 0 to 1[1]
3Elongation (E) I L 0 to 1[1]
4Wentworth Flatness Index (WFI) L   +   I 2 S 1 to ∞[56]
5Krumbein Intercept Sphericity (KIS) I S L 2 3 0 to 1[23,57]
6Corey Shape Factor (CSF) S L I 0 to 1[58]
7Maximum Projection Sphericity (MPS) S 2 L I 3 0 to 1[59,60]
8Aschenbrenner Working Sphericity (AWS) 12.8 F 2 E 3 1   +   F 1   +   E   +   6 1   +   F 2 ( 1   +   E 2 ) 0 to 1 F is S / I and E is I / L [61]
9Aschenbrenner Shape Factor (ASF) L S I 2 0 to ∞[61]
10Janke Form Factor (JFF) S L 2   +   I 2   +   S 2 3 0 to 1[62]
11Oblate–Prolate Index (OPI) 10 L     I L     S     0.5 S / L −∞ to +∞[63]
12Solidity (SOL) V V C H 0 to 1 V is the particle volume, and V C H is the volume of the convex hull [64]
13Circularity (CIR) 6 V A r 3 / π 0 to 1The ratio of particle volume V to the volume of the sphere with an equivalent surface area to the particle A r [61]
14Volume Sphericity (VSP) V V C i r 0 to 1 V is the particle volume and V C i r is the volume of the smallest circumscribing sphere to the particle [65]
15Diameter Sphericity (DSP) D V D C i r 0 to 1 D V is the diameter of the sphere with equivalent volume to the particle, and D C i r is the diameter of the smallest circumscribing sphere [66]
16Surface Area Sphericity (SAS) A r v A r 0 to 1 A r v is the surface area of the sphere with equivalent volume to the particle, and A r is the surface area of the particle [67]
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Tunwal, M.; Lim, A. A Low-Cost, Repeatable Method for 3D Particle Analysis with SfM Photogrammetry. Geosciences 2023, 13, 190. https://doi.org/10.3390/geosciences13070190

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Tunwal M, Lim A. A Low-Cost, Repeatable Method for 3D Particle Analysis with SfM Photogrammetry. Geosciences. 2023; 13(7):190. https://doi.org/10.3390/geosciences13070190

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Tunwal, Mohit, and Aaron Lim. 2023. "A Low-Cost, Repeatable Method for 3D Particle Analysis with SfM Photogrammetry" Geosciences 13, no. 7: 190. https://doi.org/10.3390/geosciences13070190

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