Pedigree Investigation of Polish Sport Horses in Show Jumping: Insights for Global Breeding
Simple Summary
Abstract
1. Introduction
2. Materials and Methods
3. Results
4. Discussion
5. Conclusions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Conflicts of Interest
Abbreviations
| Cp | Pedigree completeness index |
| Mean inbreeding coefficient | |
| Fi | Individual inbreeding coefficient |
| GD | Genetic diversity |
| GD* | Genetic diversity accounting for unequal founder contribution |
| ge | Discrete generation equivalents |
| LAP | Longest ancestral path |
| Ne | Effective population size |
| Nenf | Effective number of non-founders |
| fe | Founder equivalents |
| fge | Founder genome equivalents |
| SP | Polish Sport Horse |
| ΔFi | Individual increase in inbreeding |
References
- Lewczuk, D. The effect of sire’s breed on three body measurements and body conformation score in Polish Halfbred Horse at the beginnings and on the present-day of the breed. Anim. Sci. Pap. Rep. 2005, 23, 171–179. [Google Scholar]
- Polish Horse Breeders Association. Available online: https://www.pzhk.pl/ (accessed on 7 April 2026).
- Pietrzak, S.; Próchniak, T. The evaluation of the value for sports purposes of warm-blooded horse breeds in Poland for the show jumping discipline. Ann. Anim. Sci. 2014, 14, 537–543. [Google Scholar] [CrossRef]
- Próchniak, T.; Rozempolska-Rucińska, I.; Zięba, G. Preliminary evaluation of the use value of jumping horses based on their results achieved in Grand Prix competitions. Ann. Anim. Sci. 2014, 14, 271–278. [Google Scholar] [CrossRef]
- Bartolomé, E.; Menéndez-Buxadera, A.; Molina, A.; Valera, M. Plasticity effect of rider–horse interaction on genetic evaluations for show jumping discipline in sport horses. J. Anim. Breed. Genet. 2018, 135, 138–148. [Google Scholar] [CrossRef]
- Rovere, G.; Ducro, B.J.; van Arendonk, J.A.M.; Norberg, E.; Madsen, P. Analysis of competition performance in dressage and show jumping of Dutch Warmblood horses. J. Anim. Breed. Genet. 2016, 133, 503–512. [Google Scholar] [CrossRef]
- Schubertová, Z.; Candrák, J.; Rolinec, M. Genetic evaluation of show jumping horses in the Slovak Republic. Ann. Anim. Sci. 2016, 16, 387–398. [Google Scholar] [CrossRef]
- Viklund, Å.; Eriksson, S. Genetic analyses of linear profiling data on 3-year-old Swedish Warmblood horses. J. Anim. Breed. Genet. 2018, 135, 62–72. [Google Scholar] [CrossRef]
- Borowska, A.; Szwaczkowski, T. Pedigree analysis of Polish warmblood horses participating in riding performance tests. Can. J. Anim. Sci. 2015, 95, 21–29. [Google Scholar] [CrossRef]
- Bussiman, F.O.; Perez, B.C.; Ventura, R.V.; Peixoto, M.; Curi, R.A.; Balieiro, J.C.C. Pedigree analysis and inbreeding effects over morphological traits in Campolina horse population. Animal 2018, 12, 2246–2255. [Google Scholar] [CrossRef] [PubMed]
- Van Eldik, P.; Van Der Waaij, E.H.; Ducro, B.; Kooper, A.W.; Stout, T.A.E.; Colenbrander, B. Possible negative effects of inbreeding on semen quality in Shetland pony stallions. Theriogenology 2006, 65, 1159–1170. [Google Scholar] [CrossRef] [PubMed]
- Wolc, A.; Balińska, K. Inbreeding effects on exterior traits in Polish konik horses. Arch. Anim. Breed. 2010, 53, 1–8. [Google Scholar] [CrossRef][Green Version]
- Cecchi, F.; Carlini, G.; Giuliotti, L.; Russo, C. Inbreeding may affect phenotypic traits in an Italian population of Basset Hound dogs. Rend. Lincei. Sci. Fis. E Nat. 2018, 29, 165–170. [Google Scholar] [CrossRef]
- Kjöllerström, H.J.; Gama, L.T.; Oom, M.M. Impact of inbreeding on fitness-related traits in the highly threatened Sorraia horse breed. Livest. Sci. 2015, 180, 84–89. [Google Scholar] [CrossRef]
- Todd, E.T.; Ho, S.Y.W.; Thomson, P.C.; Ang, R.A.; Velie, B.D.; Hamilton, N.A. Founder-specific inbreeding depression affects racing performance in Thoroughbred horses. Sci. Rep. 2018, 8, 6167. [Google Scholar] [CrossRef]
- Sölkner, J.; Filipcic, L.; Hampshire, N. Genetic variability of populations and similarity of subpopulations in Austrian cattle breeds determined by analysis of pedigrees. Anim. Sci. 1998, 67, 249–256. [Google Scholar] [CrossRef]
- Cassell, B.G.; Adamec, V.; Pearson, R.E. Effect of incomplete pedigrees on estimates of inbreeding and inbreeding depression for days to first service and summit milk yield in Holsteins and Jerseys. J. Dairy Sci. 2003, 86, 2967–2976. [Google Scholar] [CrossRef]
- Colleau, J.J. An indirect approach to the extensive calculation of relationship coefficients. Genet. Sel. Evol. 2002, 34, 409. [Google Scholar] [CrossRef]
- Gutiérrez, J.P.; Cervantes, I.; Molina, A.; Valera, M.; Goyache, F. Individual increase in inbreeding allows estimating effective sizes from pedigrees. Genet. Sel. Evol. 2008, 40, 359–378. [Google Scholar] [CrossRef] [PubMed]
- Cervantes, I.; Goyache, F.; Molina, A.; Valera, M.; Gutiérrez, J.P. Application of individual increase in inbreeding to estimate realized effective sizes from real pedigrees. J. Anim. Breed. Genet. 2008, 125, 301–310. [Google Scholar] [CrossRef] [PubMed]
- Lacy, R.C. Analysis of founder representation in pedigrees: Founder equivalents and founder genome equivalents. Zoo Biol. 1989, 8, 111–123. [Google Scholar] [CrossRef]
- Caballero, A.; Toro, M.A. Interrelations between effective population size and other pedigree tools for the management of conserved populations. Genet. Res. 2000, 75, 331–343. [Google Scholar] [CrossRef] [PubMed]
- Lacy, R.C. Clarification of genetic terms and their use in the management of captive populations. Zoo Biol. 1995, 14, 565–577. [Google Scholar] [CrossRef]
- Sargolzaei, M.; Colleau, J.J. Decomposing inbreeding and coancestry into ancestral components. In Proceedings of the 8th World Congress on Genetics Applied to Livestock Production, Belo Horizonte, Brazil, 13–18 August 2006. [Google Scholar]
- Sargolzaei, M.; Iwaisaki, H.; Colleau, J.J. CFC: A tool for monitoring genetic diversity. In Proceedings of the 8th World Congress on Genetics Applied to Livestock Production, Belo Horizonte, Brazil, 13–18 August 2006. [Google Scholar]
- European Commission Directive 2010/63/EU of the European Parliament of the Council on the protection of animals used for scientific purposes. Off. J. Eur. Union 2010, 50, 33–79.
- Zechner, P.; Sölkner, J.; Bodo, I.; Druml, T.; Baumung, R.; Achmann, R.; Marti, E.; Habe, F.; Brem, G. Analysis of diversity and population structure in the Lipizzan horse breed based on pedigree information. Livest. Prod. Sci. 2002, 77, 137–146. [Google Scholar] [CrossRef]
- Giontella, A.; Pieramati, C.; Silvestrelli, M.; Sarti, F.M. Analysis of founders and performance test effects on an autochthonous horse population through pedigree analysis: Structure, genetic variability and inbreeding. Animal 2019, 13, 15–24. [Google Scholar] [CrossRef]
- Medeiros, B.R.; Bertoli, C.D.; Garbade, P.; McManus, C.M. Brazilian Sport Horse: Pedigree analysis of the Brasileiro de Hipismo breed. Ital. J. Anim. Sci. 2014, 13, 3146. [Google Scholar] [CrossRef]
- Vicente, A.A.; Carolino, N.; Gama, L.T. Genetic diversity in the Lusitano horse breed assessed by pedigree analysis. Livest. Sci. 2012, 148, 16–25. [Google Scholar] [CrossRef]
- Kusza, S.; Priskin, K.; Ivankovic, A.; Jędrzejewska, B.; Podgórski, T.; Jávor, A.; Mihók, S. Genetic characterization and population bottleneck in the Hucul horse based on microsatellite and mitochondrial data. Biol. J. Linn. Soc. 2013, 109, 54–65. [Google Scholar] [CrossRef]
- Boichard, D.; Maignel, L.; Verrier, E. The value of using probabilities of gene origin to measure genetic variability in a population. Genet. Sel. Evol. 1997, 29, 5–23. [Google Scholar] [CrossRef]
- Roos, L.; Hinrichs, D.; Nissen, T.; Krieter, J. Investigations into genetic variability in Holstein horse breed using pedigree data. Livest. Sci. 2015, 177, 25–32. [Google Scholar] [CrossRef]
| Parameter | Formula | Formula Description |
|---|---|---|
| Discrete generation equivalents (ge) | nj—number of known ancestors of the j-th individual gij is the number of generations between the i-th ancestor and the j-th animal N—number of animals in the reference population | |
| Pedigree completeness Cassel method (Cp) | ak—number of known ancestors in the k-th generation, g—number of generations, 2i—maximum number of ancestors in the i-th generation | |
| Individual increase in inbreeding (ΔFi) | Fi—individual inbreeding coefficient ge—discrete generation equivalent. | |
| Effective population size (Ne) | ΔF—individual inbreeding gain | |
| Founder equivalent (fe) | pi—proportion of genes of the i-th founder in the reference population. | |
| Founder genome equivalent (fge) | pi—proportion of genes contributed by the i-th founder to the offspring population, ri—proportion of genes of the i-th founder that are preserved in the reference population. | |
| Non-founder equivalent (Nenf) | fge—founder genome equivalent fe—founder equivalent | |
| Genetic diversity (GD) unequal founder contribution, bottlenecks, and genetic drift | fge—founder genome equivalent | |
| Genetic diversity (GD*) only unequal founder contribution | fe—founder equivalent | |
| Contribution of founders’ genes (cy) | pyj—proportion of genes of founder (y) transmitted through Nodal Common Ancestor (j) uj—contribution of genes of Nodal Common Ancestor (j) | |
| Contribution of founders’ genes to average inbreeding (v1y) | cy,i—contribution of founder (y) to the inbreeding of individual (i) N—number of individuals in the population | |
| Contribution of founders’ genes to average coancestry (v2y) | cy,i,cy,j—contributions of founder (y) to individuals (i) and (j), respectively | |
| Contributions of Mendelian sampling variance of ancestors (m) | Fi—inbreeding coefficient of individual (i) mik—contribution of the Mendelian sampling variance of ancestor (k) to Fi | |
| Contributions of genes of nodal common ancestors (u) | uij—contribution of genes of Nodal Common Ancestor (j) to the inbreeding of individual (i) |
| Parameter | Symbol | Value |
|---|---|---|
| Pedigree structure | ||
| Size of the reference population | 513 | |
| Number of individuals in the pedigree | 18,836 | |
| Number of founders in the population | 640 | |
| Longest ancestral path | LAP | 16 |
| Pedigree completeness (%) | Cp | 98.45 |
| Average number of discrete generation equivalents | ge | 5.753 |
| Minimum number of discrete generation equivalents | ge min | 2.711 |
| Maximum number of discrete generation equivalents | ge max | 7.525 |
| Homozygosity in the population | ||
| Number of inbreds | 420 | |
| Average inbreeding coefficients (%) | 0.645 | |
| Average inbreeding coefficients in the inbreds (%) | 0.768 | |
| Minimum of inbreeding coefficients (%) | Fmin | 0.003 |
| Maximum of inbreeding coefficients (%) | Fmax | 5.259 |
| Average individual increase in inbreeding (%) | ΔFi | 0.100 |
| Effective population size | Ne | 395.144 |
| Average coancestry (%) | 1.935 | |
| Genetic diversity in the population | ||
| Effective number of founders | fe | 131.083 |
| Effective number of founder genomes | fge | 25.841 |
| Effective number of non-founders | Nenf | 32.186 |
| Loss of genetic diversity (unequal founder contribution, bottlenecks, and genetic drift) | 1-GD | 0.019 |
| Loss of genetic diversity (only unequal founder contribution) | 1-GD* | 0.004 |
| Breeding Group | 1st Generation | 2nd Generation | 3rd Generation | Average | |||
|---|---|---|---|---|---|---|---|
| ♂♂ | ♀♀ | ♂♂ | ♀♀ | ♂♂ | ♀♀ | ||
| Polish breeds | 0.36 | 0.58 | 0.05 | 0.31 | 0.07 | 0.13 | 0.25 |
| German breeds | - | 0.23 | 0.64 | 0.41 | 0.63 | 0.61 | 0.42 |
| Belgian and Dutch breeds | 0.58 | 0.10 | 0.17 | 0.13 | 0.06 | 0.15 | 0.20 |
| French breeds | 0.06 | 0.04 | 0.11 | 0.03 | 0.13 | 0.06 | 0.07 |
| Thoroughbred | - | 0.05 | 0.03 | 0.12 | 0.11 | 0.05 | 0.06 |
| Founder Breed Number | Sex 1 | Breed 2 | Birth Year | cy [%] | v1y [%] | m1y [%] | u1y [%] | v2y [%] | m2y [%] | u2y [%] |
|---|---|---|---|---|---|---|---|---|---|---|
| Ladykiller DE306064000861 | S | xx | 1961 | 4.031 | 0.068 | 0.044 | 0.026 | 0.142 | 0.081 | 0.062 |
| Rantzau DE306064779046 | S | xx | 1946 | 3.172 | 0.080 | 0.045 | 0.019 | 0.132 | 0.050 | 0.017 |
| Ramzes DE321210365437 | S | xo | 1937 | 3.075 | 0.054 | 0.039 | 0.032 | 0.106 | 0.047 | 0.037 |
| Cottage Son DE321210375544 | S | xx | 1944 | 2.934 | 0.055 | 0.041 | 0.035 | 0.097 | 0.043 | 0.037 |
| Loretto DE321210289432 | S | hol | 1932 | 2.171 | 0.033 | 0.018 | 0.016 | 0.063 | 0.024 | 0.021 |
| Furioso DE306064703339 | S | xx | 1939 | 2.074 | 0.033 | 0.014 | 0.010 | 0.068 | 0.022 | 0.015 |
| Fougere DE304048545371 | M | sf | 1971 | 1.375 | 0.000 | 0.000 | 0.000 | 0.033 | 0.009 | 0.000 |
| Vestale du Bois 25000149001674K | M | sf | 1942 | 1.242 | 0.030 | 0.006 | 0.000 | 0.049 | 0.008 | 0.000 |
| Anblick DE321210369138 | S | xx | 1938 | 1.061 | 0.017 | 0.006 | 0.003 | 0.027 | 0.006 | 0.003 |
| Dame de Ranville DE304046020147 | M | sf | 1947 | 1.016 | 0.000 | 0.000 | 0.000 | 0.020 | 0.005 | 0.001 |
| Makler I DE321210284029 | S | hol | 1929 | 0.841 | 0.011 | 0.003 | 0.002 | 0.020 | 0.004 | 0.003 |
| Manometer DE321210379553 | S | xx | 1953 | 0.788 | 0.005 | 0.001 | 0.000 | 0.018 | 0.003 | 0.002 |
| Fanatiker DE321210321940 | S | hol | 1940 | 0.778 | 0.007 | 0.002 | 0.002 | 0.017 | 0.003 | 0.002 |
| Duellant DE331310358643 | S | han | 1943 | 0.714 | 0.003 | 0.003 | 0.003 | 0.012 | 0.003 | 0.002 |
| Ferdinand DE331310340641 | S | han | 1941 | 0.688 | 0.000 | 0.000 | 0.000 | 0.012 | 0.002 | 0.002 |
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Próchniak, T. Pedigree Investigation of Polish Sport Horses in Show Jumping: Insights for Global Breeding. Animals 2026, 16, 1152. https://doi.org/10.3390/ani16081152
Próchniak T. Pedigree Investigation of Polish Sport Horses in Show Jumping: Insights for Global Breeding. Animals. 2026; 16(8):1152. https://doi.org/10.3390/ani16081152
Chicago/Turabian StylePróchniak, Tomasz. 2026. "Pedigree Investigation of Polish Sport Horses in Show Jumping: Insights for Global Breeding" Animals 16, no. 8: 1152. https://doi.org/10.3390/ani16081152
APA StylePróchniak, T. (2026). Pedigree Investigation of Polish Sport Horses in Show Jumping: Insights for Global Breeding. Animals, 16(8), 1152. https://doi.org/10.3390/ani16081152

