Salmonella Genomic Island 1 is Broadly Disseminated within Gammaproteobacteriaceae
Abstract
:1. Introduction
2. Materials and Methods
2.1. Preliminary Screening of SRA for SGI1-REs and Subsequent Genome Assembly
2.2. Putative Identification and Clustering of SGI1-RE Variants
2.3. Annotation and Comparative Analysis of SGI1-REs
2.4. Phylogenomic Analysis and Genotypic Characterization of Clonal Subpopulations
2.5. Data Availability
3. Results and Discussion
3.1. Potential Discovery of an Ancestral Variant of Salmonella Genomic Island 1
3.2. Identification of a Clonal Outbreak of Extensively Drug-Resistant Klebsiella pneumoniae Carrying a Novel SGI1-RE
3.3. Novel Variants and Hosts of SGI1-Related Elements
Supplementary Materials
Author Contributions
Funding
Acknowledgments
Conflicts of Interest
References
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Cummins, M.L.; Hamidian, M.; Djordjevic, S.P. Salmonella Genomic Island 1 is Broadly Disseminated within Gammaproteobacteriaceae. Microorganisms 2020, 8, 161. https://doi.org/10.3390/microorganisms8020161
Cummins ML, Hamidian M, Djordjevic SP. Salmonella Genomic Island 1 is Broadly Disseminated within Gammaproteobacteriaceae. Microorganisms. 2020; 8(2):161. https://doi.org/10.3390/microorganisms8020161
Chicago/Turabian StyleCummins, Max Laurence, Mohammad Hamidian, and Steven Philip Djordjevic. 2020. "Salmonella Genomic Island 1 is Broadly Disseminated within Gammaproteobacteriaceae" Microorganisms 8, no. 2: 161. https://doi.org/10.3390/microorganisms8020161