Curcumin Changed the Number, Particle Size, and miRNA Profile of Serum Exosomes in Roman Laying Hens under Heat Stress
Abstract
:1. Introduction
2. Materials and Methods
2.1. Experimental Chickens and Curcumin
2.2. Blood Collection and Exosome Isolation
2.3. Transmission Electron Microscopy
2.4. Nanoparticle Tracking Analysis
2.5. miRNA Sequencing
2.6. Bioinformatics Analysis of miRNA
2.7. Analysis of Differentially Expressed miRNAs
2.8. Prediction of Target Genes of miRNAs
2.9. Quantitative Real-Time PCR
2.10. Statistical Analysis
3. Results
3.1. Isolation and Characterization of Serum Exosomes
3.2. Differential Expression Analysis of miRNA Profiles in Serum Exosomes
3.3. Bioinformatics Analysis of the Target Genes of the Differentially Expressed miRNAs
3.4. RT-qPCR Experimental Validation of the Sequencing Data
4. Discussion
5. Conclusions
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Conflicts of Interest
References
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Genes | Sequences of Primer (5′–3′) | Genes No. |
---|---|---|
gga-miR-100-5p | AACCCGTAGATCCGAACTTGTG | MIMAT0001178 |
gga-miR-122-5p | TGGAGTGTGACAATGGTGTTTGT | MIMAT0001190 |
gga-miR-125b-5p | TCCCTGAGACCCTAACTTGTGA | MIMAT0001105 |
gga-miR-1416-5p | TCCTTAACTCATGCCGCTGTG | MIMAT0007285 |
gga-miR-142-3p | TGTAGTGTTTCCTACTTTATGG | MIMAT0001194 |
gga-miR-1559-5p | TTCGATGCTTGTATGCTACTCC | MIMAT0007416 |
gga-miR-199-5p | CCCAGTGTTCAGACTACCTGTTC | MIMAT0001152 |
gga-miR-19a-3p | TGTGCAAATCTATGCAAAACTGA | MIMAT0001112 |
gga-miR-19b-3p | TGTGCAAATCCATGCAAAACTGA | MIMAT0001110 |
gga-miR-214 | ACAGCAGGCACAGACAGGCAG | MIMAT0007751 |
gga-miR-221-3p | AGCTACATTGTCTGCTGGGTTTC | MIMAT0001108 |
gga-miR-30a-5p | TGTAAACATCCTCGACTGGAAG | MIMAT0001135 |
gga-5s-rRNA-F | CCATACCACCCTGGAAACGC | AF419700 |
gga-5s-rRNA-R | TACTAACCGAGCCCGACCCT | AF419700 |
Groups | Pathway Id | Pathway Description | S Gene Number | TS Gene Number | p Value of Fisher’s Exact Test |
---|---|---|---|---|---|
NT vs. NC | ko00270 | Cysteine and methionine metabolism | 27 | 1900 | 1.15 × 10−3 |
ko03060 | Protein export | 16 | 1900 | 1.17 × 10−3 | |
ko00071 | Fatty acid degradation | 22 | 1900 | 1.41 × 10−3 | |
ko00190 | Oxidative phosphorylation | 57 | 1900 | 1.66 × 10−3 | |
ko04120 | Ubiquitin-mediated proteolysis | 63 | 1900 | 7.03 × 10−3 | |
HC vs. NC | ko00190 | Oxidative phosphorylation | 60 | 1925 | 3.07 × 10−4 |
ko03060 | Protein export | 16 | 1925 | 1.38 × 10−3 | |
ko00270 | Cysteine and methionine metabolism | 27 | 1925 | 1.46 × 10−3 | |
ko00071 | Fatty acid degradation | 22 | 1925 | 1.74 × 10−3 | |
HT vs. NC | ko00071 | Fatty acid degradation | 23 | 1877 | 3.27 × 10−4 |
ko00190 | Oxidative phosphorylation | 58 | 1877 | 5.93 × 10−4 | |
ko00270 | Cysteine and methionine metabolism | 27 | 1877 | 9.22 × 10−4 | |
ko03060 | Protein export | 16 | 1877 | 9.95 × 10−4 | |
ko04120 | Ubiquitin-mediated proteolysis | 63 | 1877 | 5.09 × 10−3 | |
ko04260 | Cardiac muscle contraction | 30 | 1877 | 9.22 × 10−3 | |
HT vs. HC | ko00071 | Fatty acid degradation | 23 | 1897 | 3.93 × 10−4 |
ko00190 | Oxidative phosphorylation | 59 | 1897 | 4.01 × 10−4 | |
ko00270 | Cysteine and methionine metabolism | 26 | 1897 | 3.08 × 10−3 | |
ko03060 | Protein export | 15 | 1897 | 4.69 × 10−3 |
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Kang, K.; Gao, W.; Cui, Y.; Xiao, M.; An, L.; Wu, J. Curcumin Changed the Number, Particle Size, and miRNA Profile of Serum Exosomes in Roman Laying Hens under Heat Stress. Genes 2024, 15, 217. https://doi.org/10.3390/genes15020217
Kang K, Gao W, Cui Y, Xiao M, An L, Wu J. Curcumin Changed the Number, Particle Size, and miRNA Profile of Serum Exosomes in Roman Laying Hens under Heat Stress. Genes. 2024; 15(2):217. https://doi.org/10.3390/genes15020217
Chicago/Turabian StyleKang, Kai, Wen Gao, Yanfeng Cui, Mei Xiao, Lilong An, and Jiang Wu. 2024. "Curcumin Changed the Number, Particle Size, and miRNA Profile of Serum Exosomes in Roman Laying Hens under Heat Stress" Genes 15, no. 2: 217. https://doi.org/10.3390/genes15020217
APA StyleKang, K., Gao, W., Cui, Y., Xiao, M., An, L., & Wu, J. (2024). Curcumin Changed the Number, Particle Size, and miRNA Profile of Serum Exosomes in Roman Laying Hens under Heat Stress. Genes, 15(2), 217. https://doi.org/10.3390/genes15020217