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Editorial

Special Issue “10th Anniversary of Catalysts: Biocatalysis in Analysis and Synthesis—Past, Present and Future”

1
Biotechnology Laboratory, School of Chemical Engineering, National Technical University of Athens, 9 Iroon Polytech Str., Zografou Campus, 15780 Athens, Greece
2
Department of Chemistry, The Pennsylvania State University, University Park, PA 16802, USA
3
Institute of Molecular and Industrial Biotechnology, Lodz University of Technology, 90-537 Lodz, Poland
*
Author to whom correspondence should be addressed.
Catalysts 2022, 12(12), 1626; https://doi.org/10.3390/catal12121626
Submission received: 29 November 2022 / Accepted: 8 December 2022 / Published: 12 December 2022
The milestone of the 10th anniversary of Catalysts is a great time to reflect on past accomplishments, present progress and challenges, as well as to identify future challenges and opportunities. Biocatalysis has moved from a niche area of catalysis to the forefront as a key enabling technology for successfully addressing challenges in the fields of organic synthesis and analysis. This is also illustrated by the continuous growth of the “Biocatalysis” section of Catalysts, with a total number of 130 Special Issues, from which 32 are active online and 98 have been completed, and a total number of 761 articles published to date. As a way of celebrating the 10th anniversary of Catalysts, and in view of the key importance of biocatalysis, the “Biocatalysis” section has therefore launched a Special Issue entitled “10th Anniversary of Catalysts: Biocatalysis in Analysis and Synthesis—Past, Present and Future”.
The enzymatic monoacetylation of diols catalyzed by Candida antarctica lipase B is a valuable desymmetrization methodology and has been applied by Madalińska et al. [1] to prochiral phosphines and phosphine P-sulfides as a route towards P-chiral catalysts. An enantiomeric excess of 98% and 10% yield could be achieved in the case of bis(2-hydroxy-methylphenyl)phenylphosphine when using C. antarctica lipase B as a catalyst and t-butyl methyl ether/pyridine as a solvent, while 77% enantiomeric excess and 60% yield was the best result achieved in the case of bis(2-hydroxymethylphenyl)phenylphosphine-P-sulfide when using lipase from Pseudomonas fluorescens as a catalyst and t-butyl methyl ether as a solvent [1].
The low-cost liquid lipase Eversa Transform, a variant lipase from Thermomyces lanuginosus, was applied by Vieira et al. [2] in the hydrolysis of acylglycerols from soybean oil deodorizer distillate to free fatty acids in high yields, and for the simultaneous esterification/transesterification of soybean oil deodorizer distillate to fatty acid ethylesters in high yields using ethanol as an acyl acceptor.
A simple mathematical tool has been developed by Rodrigues de Sousa et al. [3] for optimizing the syntheses of short, medium or long-chain esters from acids and alcohols using immobilized lipase and solvent-free systems.
The substrate scope, crystal structure, kinetic properties and thermostability of the recombinantly expressed L-amino acid oxidase from Pseudoalteromonas luteoviolacea have been determined by Savino et al. [4]. The high expression level, ease of purification, high thermostability and activity on many different L-amino acids make this enzyme not only attractive for the synthesis of enantiopure amino acids or related compounds but also for detection, due to its high catalytic efficiency on a subset of amino acids [4]. The determined crystal structure provides a solid basis for engineering tailor-made variants of L-amino acid oxidase for activity on specific amino acids [4].
The hydrogen-dependent carbon dioxide reductase from Thermoanaerobacter kivui was immobilized in a redox polymer on a cathode, and its activity was investigated by Ruth et al. [5] regarding H2 formation from electricity. A 340-fold increase in the current density has been demonstrated in a rotating disk electrode system using cobaltocene-functionalized polyallylamine as a redox polymer paired with the hydrogen-dependent carbondioxide reductase from T. kivui, which resulted in significantly higher maximum current densities than for previously reported systems [5].
Cell-free protein synthesis has been used by Rolf et al. [6] as a valuable tool for simplifying and accelerating the identification of novel non-heme Fe2+/α-ketoglutarate-dependent dioxygenases, which can be applied for the selective hydroxylation of L-lysine in the 3- and 4-position in whole-cell biotransformations. Six novel and yet uncharacterized non-heme Fe2+/α-ketoglutarate-dependent dioxygenases from Kineococcus rhizosphaerae, Mycobacterium interjectum, Photorhabdus luminescens, Burkholderia sp. MSMB617WGS, Burkholderia pseudomallei and Burkholderia plantarii with suitable activities have been found and extend the range of enzymes for catalyzing the hydroxylation of L-lysine, whereby further investigations will be of interest for providing the absolute configuration of the resulting 3-hydroxy-L-lysine and 4-hydroxy-L-lysine [6].
The whole genome sequencing of three Streptomyces sp. strains, different identification approaches for transaminases and laccases and the functional expression of the corresponding genes have been combined by Ferrandi et al. [7]. They enabled the characterization of a novel transaminase and a novel laccase, which were shown to be exceptionally thermostable. The novel transaminase Sbv333-TA was demonstrated to have a broad substrate scope, including β-ketoesters such as methyl acetoacetate and ethyl benzoylacetate, while improved activity in the presence of the organic solvent acetonitrile was found for the novel laccase Sbv286-LAC [7].
The substrate scope of silicatein-α, a hydrolytic enzyme from siliceous marine sponges of interest for biocatalytic silylation, has been investigated by Sparkes et al. [8] in a series of condensation reactions of triethylsilanol with various aromatic and aliphatic alcohols. The preference of silicatein-α for the silylation of the S-enantiomers of aliphatic alcohols and the high degree of conversion in the nonpolar solvents n-octane and toluene are good starting points for further evolution as valuable biocatalysts for the synthesis of organosiloxanes [8].
Laccases from Trametes versicolor, Myceliophthora thermophila, Bacillus subtilis and laccase-like multicopper oxidase from T. thermophila have been investigated by Milovanovic et al. in the oxidation of 1,4-dihydropyridine-based hexahydroquinolines to the corresponding pyridine-containing tetrahydroquinolines and in the oxidation of 1,4-dihydropyridine-based decahydroacridines to the corresponding pyridine-based octahydroacridines [9].
Phosphotransferases, phosphohydrolases, phosphorylases and phosphomutases are powerful biocatalysts for highly selective and efficient phosphorylation reactions, and their applications have been highlighted by Wohlgemuth [10], including useful phosphoryl donors and systems for their regeneration, reaction engineering, product recovery and purification. Examples of valuable analytical and synthetic applications of phospho-rylation biocatalysts are provided, which illustrate the resource efficiency of highly selective phosphorylation reactions proceeding with complete conversion [10].
Biocatalysts, including both protein-based and nucleic acid-based enzymes, can also be utilized for constructing catalyst-based biomolecular logic gates that can read various molecular inputs and provide chemical, optical, and electrical outputs. Progress in constructing logic gates that take advantage of biological catalysts is discussed by Winston and Boehr [11].
The biological synthesis of biodegradable short-chain-length, medium-chain-length and short-medium-chain-length polyhydroxyalkanoates and their applications and recycling have been discussed by Dalton et al. [12].
We would like to thank all of the authors for their contributions and the editorial staff at Catalysts, particularly Pamela Li, M.Sc., Section Managing Editor, and Ellia Zhang, Assistance Editor, for their efforts. We hope that you enjoy this Special Issue to commemorate the 10-Year Anniversary of Catalysts.

Funding

This research received no external funding.

Conflicts of Interest

The authors declare no conflict of interest.

References

  1. Madalińska, L.; Kiełbasiński, P.; Kwiatkowska, M. Enzymatic Desymmetrisation of Prochiral Phosphines and Phosphine P-Sulfides as a Route to P-Chiral Catalysts. Catalysts 2022, 12, 171. [Google Scholar] [CrossRef]
  2. Vieira, A.-C.; Moulin Cansian, A.B.; Guimarães, J.R.; Marquettotti Salcedo Vieira, A.; Fernandez-Lafuente, R.; Waldir Tardioli, P. Performance of Liquid Eversa on Fatty Acid Ethyl Esters Production by Simultaneous Esterification/Transesterification of Low-to-High Acidity Feedstocks. Catalysts 2021, 11, 1486. [Google Scholar] [CrossRef]
  3. Rodrigues de Sousa, R.; Sant’Ana da Silva, A.; Fernandez-Lafuente, R.; Santana Ferreira-Leitão, V. Simplified Method to Optimize Enzymatic Esters Syntheses in Solvent-Free Systems: Validation Using Literature and Experimental Data. Catalysts 2021, 11, 1357. [Google Scholar] [CrossRef]
  4. Savino, S.; Daniël-Moráh Meijer, J.; Rozeboom, H.J.; van Beek, H.L.; Fraaije, M.W. Kinetic and Structural Properties of a Robust Bacterial L-Amino Acid Oxidase. Catalysts 2021, 11, 1309. [Google Scholar] [CrossRef]
  5. Ruth, J.C.; Schwarz, F.M.; Müller, V.; Spormann, A.M. Enzymatic Hydrogen Electrosynthesis at Enhanced Current Density Using a Redox Polymer. Catalysts 2021, 11, 1197. [Google Scholar] [CrossRef]
  6. Rolf, J.; Nerke, P.; Britner, A.; Krick, S.; Lütz, S.; Rosenthal, K. From Cell-Free Protein Synthesis to Whole-Cell Biotransformation: Screening and Identification of Novel α-Ketoglutarate-Dependent Dioxygenases for Preparative-Scale Synthesis of Hydroxy-l-Lysine. Catalysts 2021, 11, 1038. [Google Scholar] [CrossRef]
  7. Ferrandi, E.E.; Spasic, J.; Djokic, L.; Vainshtein, Y.; Senthamaraikannan, R.; Vojnovic, S.; Grumaz, C.; Monti, D.; Nikodinovic-Runic, J. Novel Transaminase and Laccase from Streptomyces spp. Using Combined Identification Approaches. Catalysts 2021, 11, 919. [Google Scholar] [CrossRef]
  8. Sparkes, E.I.; Egedeuzu, C.S.; Lias, B.; Sung, R.; Caslin, S.A.; Tabatabaei Dakhili, S.Y.; Taylor, P.G.; Quayle, P.; Wong, L.S. Biocatalytic Silylation: The Condensation of Phenols and Alcohols with Triethylsilanol. Catalysts 2021, 11, 879. [Google Scholar] [CrossRef]
  9. Milovanovic, J.; Gözde Gündüz, M.; Zerva, A.; Petkovic, M.; Beskoski, V.; Thomaidis, N.S.; Topakas, E.; Nikodinovic-Runic, J. Synthesis and Laccase-Mediated Oxidation of New Condensed 1,4-Dihydropyridine Derivatives. Catalysts 2021, 11, 727. [Google Scholar] [CrossRef]
  10. Wohlgemuth, R. The Power of Biocatalysts for Highly Selective and Efficient Phosphorylation Reactions. Catalysts 2022, 12, 1436. [Google Scholar] [CrossRef]
  11. Winston, D.S.; Boehr, D.D. Catalyst-Based Biomolecular Logic Gates. Catalysts 2022, 12, 712. [Google Scholar] [CrossRef]
  12. Dalton, B.; Bhagabati, P.; De Micco, J.; Padamati, R.B.; O’Connor, K. A Review on Biological Synthesis of the Biodegradable Polymers Polyhydroxyalkanoates and the Development of Multiple Applications. Catalysts 2022, 12, 319. [Google Scholar] [CrossRef]
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MDPI and ACS Style

Topakas, E.; Boehr, D.; Wohlgemuth, R. Special Issue “10th Anniversary of Catalysts: Biocatalysis in Analysis and Synthesis—Past, Present and Future”. Catalysts 2022, 12, 1626. https://doi.org/10.3390/catal12121626

AMA Style

Topakas E, Boehr D, Wohlgemuth R. Special Issue “10th Anniversary of Catalysts: Biocatalysis in Analysis and Synthesis—Past, Present and Future”. Catalysts. 2022; 12(12):1626. https://doi.org/10.3390/catal12121626

Chicago/Turabian Style

Topakas, Evangelos, David Boehr, and Roland Wohlgemuth. 2022. "Special Issue “10th Anniversary of Catalysts: Biocatalysis in Analysis and Synthesis—Past, Present and Future”" Catalysts 12, no. 12: 1626. https://doi.org/10.3390/catal12121626

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