KRAS Mutations in Colorectal Adenocarcinoma: Incidence and Association with Histological Features with Particular Reference to Gly12Asp in a Multicenter GIPAD Real-World Study
Simple Summary
Abstract
1. Introduction
2. Materials and Methods
2.1. Clinicopathologic Data
2.2. Pathologic Features
2.3. MMR/MSI Status
2.4. KRAS Mutational Analysis
- Center 1: Myriapod NGS Cancer Panel (Diatech Pharmacogenetics, Jesi, Italy), sequencing on Illumina platform.
- Center 2: EasyPGX ready KRAS (Diatech Pharmacogenetics).
- Center 3: Oncomine DX Target Test (Thermo Fisher Scientific, Waltham, MA, USA), sequencing on Ion Torrent platform.
- Center 4: Oncomine Focus Assay (Thermo Fisher Scientific), sequencing on Ion Torrent platform; Myriapod NGS Cancer Panel (Diatech Pharmacogenetics).
- Center 5: Myriapod Colon Panel (Diatech Pharmacogenetics), sequencing on Ion Torrent platform; Myriapod Colon Status Kit (Diatech Pharmacogenetics) on the MassARRAY system (Sequenom, San Diego, CA, USA).
- Center 6, Center 7: Myriapod NGS Cancer Panel (Diatech Pharmacogenetics), sequencing on Illumina; EasyPGX ready KRAS (Diatech Pharmacogenetics).
- Center 8: Oncomine Focus Assay (Thermo Fisher Scientific), sequencing on Ion Torrent platform; EasyPGX ready KRAS (Diatech Pharmacogenetics).
- Center 9: RAS Mutation Screening Panel (EntroGen, Woodland Hills, CA, USA); EasyPGX ready KRAS (Diatech Pharmacogenetics).
- Centers 10 and 11: Myriapod NGS Cancer Panel DNA (Diatech Pharmacogenetics), sequencing on Illumina platform (San Diego, CA, USA); Idylla KRAS Mutation Assay (Biocartis, Mechelen, Belgium).
- Center 12: Idylla KRAS Mutation Test (Biocartis).
2.5. Statistical Analysis
3. Results
3.1. Patient Cohort
3.2. Clinicopathological Features of KRAS-Mutated CRC
3.3. KRAS Mutational Landscape
3.4. Clinicopathologic Features of Gly12Asp-Mutated CRC
4. Discussion
5. Conclusions
Supplementary Materials
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
Abbreviations
CRC | Colorectal cancer |
iMMR | Indeterminate MMR |
mKRAS | Mutated KRAS |
MMR | Mismatch repair |
MMRd | Mismatch repair deficiency |
MMRp | Mismatch repair proficiency |
MS | Microsatellite assay |
MSI | Microsatellite instability |
MSS | Microsatellite stability |
NGS | Next-generation sequencing |
NOS | Not otherwise specified |
OS | Overall survival |
PCR | Polymerase reaction chain |
wtKRAS | Wild-type KRAS |
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KRAS mut (n = 1334; 47.4%) | KRAS wt (n = 1482; 52.6%) | P (Chi-Square) | ||||
---|---|---|---|---|---|---|
Center | Center 1 | 201 | 15.1% | 356 | 24.0% | <0.001 |
Center 2 | 175 | 13.1% | 187 | 12.6% | ||
Center 3 | 145 | 10.9% | 163 | 11.0% | ||
Center 4 | 121 | 9.1% | 170 | 11.5% | ||
Center 5 | 122 | 9.1% | 108 | 7.3% | ||
Center 6 | 105 | 7.9% | 93 | 6.3% | ||
Center 7 | 106 | 7.9% | 84 | 5.7% | ||
Center 8 | 98 | 7.3% | 90 | 6.1% | ||
Center 9 | 85 | 6.4% | 100 | 6.7% | ||
Center 10 | 67 | 5.0% | 56 | 3.8% | ||
Center 11 | 67 | 5.0% | 41 | 2.8% | ||
Center 12 | 42 | 3.1% | 34 | 2.3% | ||
Assay | NGS-based assay | 783 | 58.7% | 939 | 63.3% | 0.011 |
PCR-based assay/MALDI-TOF | 551 | 41.3% | 543 | 36.7% | ||
Age | >70 years | 669 | 50.1% | 803 | 54.2% | 0.031 |
≤70 years | 665 | 49.9% | 678 | 45.8% | ||
Sex | M | 781 | 58.5% | 846 | 57.2% | 0.458 |
F | 553 | 41.5% | 634 | 42.8% | ||
Specimen | Biopsy | 363 | 27.2% | 329 | 22.2% | 0.002 |
Surgical | 971 | 72.8% | 1153 | 77.8% | ||
Site | Proximal colon | 522 | 41.0% | 489 | 34.3% | 0.002 |
Distal colon | 215 | 16.8% | 268 | 18.8% | ||
Rectosigmoid | 539 | 42.2% | 669 | 46.9% | ||
Histotype | NOS | 1096 | 87.7% | 1226 | 86.8% | 0.02 |
Mucinous | 125 | 10.0% | 122 | 8.6% | ||
Signet Ring cell | 9 | 0.7% | 19 | 1.3% | ||
Medullary | 3 | 0.2% | 17 | 1.2% | ||
Micropapillary | 6 | 0.5% | 14 | 1.0% | ||
Adenosquamous | 8 | 0.6% | 4 | 0.3% | ||
Undifferentiated | 0 | 0.0% | 8 | 0.6% | ||
Serrated | 3 | 0.2% | 2 | 0.1% | ||
Grading | High | 352 | 31.1% | 514 | 40.6% | <0.001 |
Low | 781 | 68.9% | 752 | 59.4% | ||
Budding | Bd1 | 203 | 33.3% | 325 | 41.6% | <0.001 |
Bd2 | 168 | 27.6% | 230 | 29.4% | ||
Bd3 | 238 | 39.1% | 226 | 28.9% | ||
Lymphovascular invasion | No | 293 | 31.3% | 349 | 30.8% | 0.830 |
Yes | 644 | 68.7% | 783 | 69.2% | ||
Perineural invasion | No | 502 | 55.1% | 564 | 51.2% | 0.079 |
Yes | 409 | 44.9% | 538 | 48.8% | ||
pT | pT1 | 6 | 0.8% | 10 | 1.2% | 0.388 |
pT2 | 38 | 5.0% | 54 | 6.7% | ||
pT3 | 361 | 47.4% | 382 | 47.3% | ||
pT4 | 356 | 46.8% | 362 | 44.8% | ||
pN | pN0 | 213 | 28.2% | 233 | 29.1% | 0.013 |
pN1 | 321 | 42.6% | 288 | 35.9% | ||
pN2 | 220 | 29.2% | 281 | 35.0% | ||
MMR/MS status | MMRd/MSI | 93 | 7.7% | 343 | 26.2% | <0.001 |
MMRp/MSS | 1116 | 92.3% | 966 | 73.8% |
Gly12Asp | Gly13Asp | Gly12Val | Gly12Cys | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Gly12Asp N = 319 (25.5%) | KRAS non-Gly12Asp mut * N = 934 (74.5%) | Gly13Asp N = 243 (18.2%) | KRAS non-Gly13Asp mut N = 1091 (81.8%) | Gly12Val N = 234 (17.5%) | KRAS non- Gly12Val mut * N = 1019 (82.5%) | Gly12Cys N = 89 (6.7%) | KRAS non-Gly12Cys mut N = 1245 (93.3%) | ||||||||||
A Center | Center 1 | 59 | 18.5% | 142 | 15.2% | 45 | 18.5% | 156 | 14.3% | 30 | 12.8% | 171 | 16.8% | 14 | 15.7% | 187 | 15.0% |
Center 2 | 29 | 9.1% | 116 | 12.4% | 33 | 13.6% | 112 | 10.3% | 23 | 9.8% | 122 | 12.0% | 9 | 10.1% | 136 | 10.9% | |
Center 3 | 50 | 15.7% | 123 | 13.2% | 27 | 11.1% | 148 | 13.6% | 42 | 17.9% | 131 | 12.9% | 16 | 18.0% | 159 | 12.8% | |
Center 4 | 35 | 11.0% | 86 | 9.2% | 20 | 8.2% | 101 | 9.3% | 28 | 12.0% | 93 | 9.1% | 9 | 10.1% | 112 | 9.0% | |
Center 5 | 30 | 9.4% | 92 | 9.9% | 16 | 6.6% | 106 | 9.7% | 25 | 10.7% | 97 | 9.5% | 6 | 6.7% | 116 | 9.3% | |
Center 6 | 27 | 8.5% | 78 | 8.4% | 15 | 6.2% | 90 | 8.2% | 19 | 8.1% | 86 | 8.4% | 6 | 6.7% | 99 | 8.0% | |
Center 7 | 11 | 3.4% | 51 | 5.5% | 20 | 8.2% | 86 | 7.9% | 4 | 1.7% | 58 | 5.7% | 5 | 5.6% | 101 | 8.1% | |
Center 8 | 9 | 2.8% | 54 | 5.8% | 18 | 7.4% | 80 | 7.3% | 5 | 2.1% | 58 | 5.7% | 5 | 5.6% | 93 | 7.5% | |
Center 9 | 25 | 7.8% | 60 | 6.4% | 22 | 9.1% | 63 | 5.8% | 13 | 5.6% | 72 | 7.1% | 3 | 3.4% | 82 | 6.6% | |
Center 10 | 12 | 3.8% | 55 | 5.9% | 10 | 4.1% | 57 | 5.2% | 17 | 7.3% | 50 | 4.9% | 10 | 11.2% | 57 | 4.6% | |
Center 11 | 21 | 6.6% | 46 | 4.9% | 9 | 3.7% | 58 | 5.3% | 16 | 6.8% | 51 | 5.0% | 3 | 3.4% | 64 | 5.1% | |
Center 12 | 11 | 3.4% | 31 | 3.3% | 8 | 3.3% | 34 | 3.1% | 12 | 5.1% | 30 | 2.9% | 3 | 3.4% | 39 | 3.1% | |
p-value | 0.148 | 0.253 | 0.008 | 0.299 | |||||||||||||
B Assay | NGS-based assay | 197 | 61.8% | 584 | 62.5% | 145 | 59.7% | 638 | 58.5% | 144 | 61.5% | 636 | 62.4% | 55 | 61.8% | 728 | 58.5% |
PCR-based assay/MALDI-TOF | 122 | 38.2% | 350 | 37.5% | 98 | 40.3% | 453 | 41.5% | 90 | 38.5% | 383 | 37.6% | 34 | 38.2% | 517 | 41.5% | |
p-value | 0.806 | 0.732 | 0.803 | 0.538 | |||||||||||||
C Site | Distal Colon | 129 | 41.9% | 393 | 40.4% | 112 | 48.5% | 410 | 39.0% | 74 | 32.7% | 448 | 42.5% | 33 | 37.5% | 489 | 41.0% |
Proximal Colon | 35 | 11.4% | 187 | 19.2% | 34 | 14.7% | 188 | 17.9% | 47 | 20.8% | 175 | 16.6% | 18 | 20.5% | 204 | 17.1% | |
Rectosigmoid Colon | 144 | 46.8% | 393 | 40.4% | 85 | 36.8% | 452 | 43.0% | 105 | 46.5% | 432 | 40.9% | 37 | 42.0% | 500 | 41.9% | |
p-value | 0.005 | 0.03 | 0.023 | 0.678 | |||||||||||||
D Histotype | NOS | 264 | 87.1% | 773 | 88.3% | 201 | 87.0% | 895 | 87.8% | 196 | 90.3% | 841 | 87.5% | 72 | 87.8% | 1024 | 87.7% |
Mucinous | 34 | 11.2% | 80 | 9.1% | 22 | 9.5% | 103 | 10.1% | 19 | 8.8% | 95 | 9.9% | 7 | 8.5% | 118 | 10.1% | |
Signet Ring cell | 2 | 0.7% | 6 | 0.7% | 0 | 0.0% | 9 | 0.9% | 1 | 0.5% | 7 | 0.7% | 3 | 3.7% | 6 | 0.5% | |
Medullary | 0 | 0.0% | 2 | 0.2% | 0 | 0.0% | 3 | 0.3% | 0 | 0.0% | 2 | 0.2% | 0 | 0.0% | 3 | 0.3% | |
Micropapillary | 1 | 0.3% | 5 | 0.6% | 2 | 0.9% | 4 | 0.4% | 0 | 0.0% | 6 | 0.6% | 0 | 0.0% | 6 | 0.5% | |
Adenosquamous | 0 | 0.0% | 8 | 0.9% | 5 | 2.2% | 3 | 0.3% | 1 | 0.5% | 7 | 0.7% | 0 | 0.0% | 8 | 0.7% | |
Undifferentiated | 0 | 0.0% | 0 | 0.0% | 0 | 0.0% | 0 | 0.0% | 0 | 0.0% | 0 | 0.0% | 0 | 0.0% | 0 | 0.0% | |
Serrated | 2 | 0.7% | 1 | 0.1% | 1 | 0.4% | 2 | 0.2% | 0 | 0.0% | 3 | 0.3% | 0 | 0.0% | 3 | 0.3% | |
p-value | 0.294 | 0.037 | 0.965 | 0.205 | |||||||||||||
E Grading | High | 70 | 26.1% | 235 | 29.8% | 77 | 37.2% | 275 | 29.7% | 46 | 24.2% | 259 | 29.9% | 18 | 25.4% | 334 | 31.5% |
Low | 198 | 73.9% | 553 | 70.2% | 130 | 62.8% | 651 | 70.3% | 144 | 75.8% | 607 | 70.1% | 53 | 74.6% | 728 | 68.5% | |
p-value | 0.248 | 0.035 | 0.117 | 0.282 |
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Share and Cite
Parente, P.; Angerilli, V.; Grillo, F.; Ambrosio, M.R.; Petrelli, F.; Gasparello, J.; Antoci, F.; Pilozzi, E.; Scarpino, S.; Adotti, F.; et al. KRAS Mutations in Colorectal Adenocarcinoma: Incidence and Association with Histological Features with Particular Reference to Gly12Asp in a Multicenter GIPAD Real-World Study. Cancers 2025, 17, 2721. https://doi.org/10.3390/cancers17172721
Parente P, Angerilli V, Grillo F, Ambrosio MR, Petrelli F, Gasparello J, Antoci F, Pilozzi E, Scarpino S, Adotti F, et al. KRAS Mutations in Colorectal Adenocarcinoma: Incidence and Association with Histological Features with Particular Reference to Gly12Asp in a Multicenter GIPAD Real-World Study. Cancers. 2025; 17(17):2721. https://doi.org/10.3390/cancers17172721
Chicago/Turabian StyleParente, Paola, Valentina Angerilli, Federica Grillo, Maria Raffaella Ambrosio, Federica Petrelli, Jessica Gasparello, Francesca Antoci, Emanuela Pilozzi, Stefania Scarpino, Flavia Adotti, and et al. 2025. "KRAS Mutations in Colorectal Adenocarcinoma: Incidence and Association with Histological Features with Particular Reference to Gly12Asp in a Multicenter GIPAD Real-World Study" Cancers 17, no. 17: 2721. https://doi.org/10.3390/cancers17172721
APA StyleParente, P., Angerilli, V., Grillo, F., Ambrosio, M. R., Petrelli, F., Gasparello, J., Antoci, F., Pilozzi, E., Scarpino, S., Adotti, F., Ascione, A., Veccia, N., Caputo, A., Giobbe, M., Gafà, R., Melocchi, L., Gandolfi, L., Parrella, P., Pasculli, B., ... Fassan, M. (2025). KRAS Mutations in Colorectal Adenocarcinoma: Incidence and Association with Histological Features with Particular Reference to Gly12Asp in a Multicenter GIPAD Real-World Study. Cancers, 17(17), 2721. https://doi.org/10.3390/cancers17172721