Phenotypic and Genotypic Characteristics of Staphylococcus aureus Nasal Strains Isolated from Students of the Pomeranian Medical University in Szczecin, Poland: A Cross-Sectional Study
Abstract
1. Introduction
2. Results
2.1. Prevalence of Nasal S. aureus Carriage Among Students
2.2. AST Results for S. aureus Strains
2.3. Molecular Analysis of S. aureus Strains
2.3.1. Prevalence of Genes Encoding Hemolysins, TSST-1, ETs, and Selected SEs
2.3.2. Prevalence of the egc Cluster Genes
2.3.3. agr System Genes
2.3.4. Genetic Relatedness of the S. aureus Strains
3. Discussion
4. Conclusions
5. Limitations of the Study
6. Materials and Methods
6.1. Study Population
6.2. Isolation and Identification of Bacterial Strains
6.3. Antimicrobial Susceptibility Testing (AST)
6.4. Molecular Biology Methods
6.4.1. Isolation of Genomic and Plasmid DNA
6.4.2. Single PCR Assay
6.4.3. Multiplex PCR Assay
6.5. Genetic Relatedness Analysis of S. aureus Strains by the PFGE Method
6.5.1. Isolation of Genomic DNA and Restriction Digestion
6.5.2. PFGE Method
6.6. Statistical Analysis
Supplementary Materials
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Conflicts of Interest
Abbreviations
| AST | Antimicrobial susceptibility testing |
| CC | Clindamycin |
| CIP | Ciprofloxacin |
| cMLSB | Constitutive macrolide-lincosamide-streptogramin B resistance phenotype |
| iMLSB | Inducible macrolide-lincosamide-streptogramin B resistance phenotype |
| MLSB | Macrolide-lincosamide-streptogramin B |
| MSB | Macrolide-streptogramin B resistance phenotype |
| DNA | Deoxyribonucleic acid |
| E | Erythromycin |
| ETs | Exfoliative toxins |
| FOX | Cefoxitin |
| MRSA | Methicillin-resistant Staphylococcus aureus |
| MSSA | Methicillin-susceptible Staphylococcus aureus |
| MUP | Mupirocin |
| NT | Non-typeable |
| PCR | Polymerase chain reaction |
| PFGE | Pulsed-field gel electrophoresis |
| PVL | Panton-Valentine leukocidin |
| R | Resistance |
| S | Susceptibility |
| SAgs | Superantigens |
| Sab | Similarity coefficient |
| SEs | Staphylococcal enterotoxins |
| SXT | Trimethoprim/sulfamethoxazole |
| TSST-1 | Toxic shock syndrome toxin-1 |
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| Study | Students n = 800 1 | Carriers n = 175 1 | Non-Carriers n = 625 1 |
|---|---|---|---|
| MA3 | 31 (3.9) | 8 (25.8) | 23 (74.2) |
| MA5 | 26 (3.3) | 7 (26.9) | 19 (73.1) |
| MB2 | 33 (4.1) | 3 (9.1) | 30 (90.9) |
| D1 | 63 (7.9) | 14 (22.2) | 49 (77.8) |
| MED2 | 210 (26.3) | 40 (19.0) | 170 (81.0) |
| MED3 | 167 (20.9) | 38 (22.8) | 129 (77.2) |
| DENT2 | 92 (11.5) | 24 (26.1) | 68 (73.9) |
| NUR1 | 57 (7.1) | 15 (26.3) | 42 (73.7) |
| MID1 | 37 (4.6) | 6 (16.2) | 31 (83.8) |
| MID2 | 36 (4.5) | 8 (22.2) | 28 (77.8) |
| PAR2 | 48 (6.0) | 12 (25.0) | 36 (75.0) |
| Study | Carriers | Non-Carriers | ||
|---|---|---|---|---|
| Male n = 52 1 | Female n = 123 1 | Male n = 171 1 | Female n = 454 1 | |
| MA3 | 2 (25.0) | 6 (75.0) | 3 (13.0) | 20 (87.0) |
| MA5 | 2 (28.6) | 5 (71.4) | 1 (5.3) | 18 (94.7) |
| MB2 | 0 (0.0) | 3 (100.0) | 3 (10.0) | 27 (90.0) |
| D1 | 0 (0.0) | 14 (100.0) | 8 (16.3) | 41 (83.7) |
| MED2 | 14 (35.0) | 26 (65.0) | 75 (44.1) | 95 (55.9) |
| MED3 | 18 (47.4) | 20 (52.6) | 42 (32.6) | 87 (67.4) |
| DENT2 | 7 (29.2) | 17 (70.8) | 11 (16.2) | 57 (83.8) |
| NUR1 | 1 (6.7) | 14 (93.3) | 2 (4.8) | 40 (95.2) |
| MID1 | 0 (0.0) | 6 (100.0) | 4 (12.9) | 27 (87.1) |
| MID2 | 0 (0.0) | 8 (100.0) | 4 (14.3) | 24 (85.7) |
| PAR2 | 8 (66.7) | 4 (33.3) | 18 (50.0) | 18 (50.0) |
| Characteristic | Total n = 175 1 | MA3 n = 8 1 | MA5 n = 7 1 | MB2 n = 3 1 | D1 n = 14 1 | MED2 n = 40 1 | MED3 n = 38 1 | DENT2 n = 24 1 | NUR1 n = 15 1 | MID1 n = 6 1 | MID2 n = 8 1 | PAR2 n = 12 1 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Antimicrobial status | ||||||||||||
| R | 28 (16.0) | 0 (0.0) | 1 (14.3) | 2 (66.7) | 0 (0.0) | 8 (20.0) | 6 (15.8) | 4 (16.7) | 1 (6.7) | 4 (66.7) | 0 (0.0) | 2 (16.7) |
| S | 147 (84.0) | 8 (100.0) | 6 (85.7) | 1 (33.3) | 14 (100.0) | 32 (80.0) | 32 (84.2) | 20 (83.3) | 14 (93.3) | 2 (33.3) | 8 (100.0) | 10 (83.3) |
| Resistance phenotype | ||||||||||||
| CIP | 1 (0.6) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 1 (4.2) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 0 (0.0) |
| cMLSB | 2 (1.1) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 1 (2.5) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 1 (16.7) | 0 (0.0) | 0 (0.0) |
| iMLSB | 21 (12.0) | 0 (0.0) | 1 (14.3) | 2 (66.7) | 0 (0.0) | 7 (17.5) | 3 (7.9) | 3 (12.5) | 1 (6.7) | 2 (33.3) | 0 (0.0) | 2 (16.7) |
| iMLSB + MUP | 1 (0.6) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 1 (2.6) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 0 (0.0) |
| MUP | 2 (1.1) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 2 (5.3) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 0 (0.0) |
| SXT | 1 (0.6) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 1 (16.7) | 0 (0.0) | 0 (0.0) |
| Genes | Total n = 175 1 | MA3 n = 8 1 | MA5 n = 7 1 | MB2 n = 3 1 | D1 n = 14 1 | MED2 n = 40 1 | MED3 n = 38 1 | DENT2 n = 24 1 | NUR1 n = 15 1 | MID1 n = 6 1 | MID2 n = 8 1 | PAR2 n = 12 1 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| hla | 175 (100.0) | 8 (100.0) | 7 (100.0) | 3 (100.0) | 14 (100.0) | 40 (100.0) | 38 (100.0) | 24 (100.0) | 15 (100.0) | 6 (100.0) | 8 (100.0) | 12 (100.0) |
| hlb | 9 (5.1) | 0 (0.0) | 1 (14.3) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 2 (5.3) | 4 (16.7) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 2 (16.7) |
| hld | 164 (93.7) | 8 (100.0) | 7 (100.0) | 3 (100.0) | 14 (100.0) | 40 (100.0) | 34 (89.5) | 24 (100.0) | 15 (100.0) | 6 (100.0) | 8 (100.0) | 5 (41.7) |
| hlg | 163 (93.1) | 8 (100.0) | 7 (100.0) | 3 (100.0) | 14 (100.0) | 36 (90.0) | 35 (92.1) | 24 (100.0) | 11 (73.3) | 5 (83.3) | 8 (100.0) | 12 (100.0) |
| lukS-PV/lukF-PV | 1 (0.6) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 1 (8.3) |
| eta | 2 (1.1) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 1 (4.2) | 1 (6.7) | 0 (0.0) | 0 (0.0) | 0 (0.0) |
| etd | 3 (1.7) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 1 (7.1) | 1 (2.5) | 1 (2.6) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 0 (0.0) |
| tst | 39 (22.3) | 2 (25.0) | 1 (14.3) | 2 (66.7) | 4 (28.6) | 5 (12.5) | 13 (34.2) | 6 (25.0) | 1 (6.7) | 0 (0.0) | 3 (37.5) | 2 (16.7) |
| sea | 24 (13.7) | 5 (62.5) | 0 (0.0) | 1 (33.3) | 0 (0.0) | 5 (12.5) | 1 (2.6) | 12 (50.0) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 0 (0.0) |
| seb | 3 (1.7) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 2 (5.3) | 0 (0.0) | 0 (0.0) | 1 (16.7) | 0 (0.0) | 0 (0.0) |
| sec | 13 (7.4) | 0 (0.0) | 3 (42.9) | 0 (0.0) | 3 (21.4) | 1 (2.5) | 4 (10.5) | 1 (4.2) | 1 (6.7) | 0 (0.0) | 0 (0.0) | 0 (0.0) |
| sed | 3 (1.7) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 1 (2.5) | 1 (2.6) | 1 (4.2) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 0 (0.0) |
| seh | 4 (2.3) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 1 (7.1) | 1 (2.5) | 2 (5.3) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 0 (0.0) |
| sej | 3 (1.7) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 1 (2.5) | 1 (2.6) | 1 (4.2) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 0 (0.0) |
| sek | 1 (0.6) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 1 (2.6) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 0 (0.0) |
| sel | 13 (7.4) | 0 (0.0) | 3 (42.9) | 0 (0.0) | 2 (14.3) | 1 (2.5) | 5 (13.2) | 1 (4.2) | 1 (6.7) | 0 (0.0) | 0 (0.0) | 0 (0.0) |
| sep | 30 (17.1) | 1 (12.5) | 0 (0.0) | 0 (0.0) | 2 (14.3) | 11 (27.5) | 4 (10.5) | 5 (20.8) | 3 (20.0) | 1 (16.7) | 2 (25.0) | 1 (8.3) |
| seq | 1 (0.6) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 1 (7.1) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 0 (0.0) |
| ser | 3 (1.7) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 1 (2.5) | 1 (2.6) | 1 (4.2) | 0 (0.0) | 0 (0.0) | 0 (0.0) | 0 (0.0) |
| Study | egc Gene Cluster | |||||
|---|---|---|---|---|---|---|
| g i m n o u n = 4 1 | g i m n o n = 41 1 | g i m o u n = 32 1 | g i m o n = 1 1 | g i o u n = 16 1 | Non-egc n = 81 1 | |
| MA3 | 0 (0.0) | 3 (37.5) | 3 (37.5) | 0 (0.0) | 0 (0.0) | 2 (25.0) |
| MA5 | 0 (0.0) | 5 (71.4) | 0 (0.0) | 0 (0.0) | 1 (14.3) | 1 (14.3) |
| MB2 | 0 (0.0) | 0 (0.0) | 2 (66.7) | 0 (0.0) | 0 (0.0) | 1 (33.3) |
| D1 | 0 (0.0) | 4 (28.6) | 4 (28.6) | 0 (0.0) | 0 (0.0) | 6 (42.9) |
| MED2 | 0 (0.0) | 6 (15.0) | 0 (0.0) | 1 (2.5) | 10 (25.0) | 23 (57.5) |
| MED3 | 2 (5.3) | 10 (26.3) | 13 (34.2) | 0 (0.0) | 0 (0.0) | 13 (34.2) |
| DENT2 | 0 (0.0) | 4 (16.7) | 7 (29.2) | 0 (0.0) | 0 (0.0) | 13 (54.2) |
| NUR1 | 1 (6.7) | 4 (26.7) | 0 (0.0) | 0 (0.0) | 1 (6.7) | 9 (60.0) |
| MID1 | 1 (16.7) | 2 (33.3) | 0 (0.0) | 0 (0.0) | 1 (16.7) | 2 (33.3) |
| MID2 | 0 (0.0) | 1 (12.5) | 0 (0.0) | 0 (0.0) | 3 (37.5) | 4 (50.0) |
| PAR2 | 0 (0.0) | 2 (16.7) | 3 (25.0) | 0 (0.0) | 0 (0.0) | 7 (58.3) |
| Study | agr System Genes | |||
|---|---|---|---|---|
| agr-1 n = 87 1 | agr-2 n = 35 1 | agr-3 n = 50 1 | agr-4 n = 3 1 | |
| MA3 | 4 (50.0) | 1 (12.5) | 3 (37.5) | 0 (0.0) |
| MA5 | 6 (85.7) | 0 (0.0) | 1 (14.3) | 0 (0.0) |
| MB2 | 1 (33.3) | 0 (0.0) | 2 (66.7) | 0 (0.0) |
| D1 | 7 (50.0) | 2 (14.3) | 5 (35.7) | 0 (0.0) |
| MED2 | 21 (52.5) | 8 (20.0) | 11 (27.5) | 0 (0.0) |
| MED3 | 16 (42.1) | 8 (21.1) | 13 (34.2) | 1 (2.6) |
| DENT2 | 13 (54.2) | 4 (16.7) | 7 (29.2) | 0 (0.0) |
| NUR1 | 7 (46.7) | 6 (40.0) | 1 (6.7) | 1 (6.7) |
| MID1 | 2 (33.3) | 2 (33.3) | 1 (16.7) | 1 (16.7) |
| MID2 | 3 (37.5) | 2 (25.0) | 3 (37.5) | 0 (0.0) |
| PAR2 | 7 (58.3) | 2 (16.7) | 3 (25.0) | 0 (0.0) |
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Kwiatkowski, P.; Masiuk, H.; Pruss, A.; Giedrys-Kalemba, S.; Baszuk, P.; Wojciechowska-Koszko, I.; Sienkiewicz, M. Phenotypic and Genotypic Characteristics of Staphylococcus aureus Nasal Strains Isolated from Students of the Pomeranian Medical University in Szczecin, Poland: A Cross-Sectional Study. Toxins 2026, 18, 237. https://doi.org/10.3390/toxins18050237
Kwiatkowski P, Masiuk H, Pruss A, Giedrys-Kalemba S, Baszuk P, Wojciechowska-Koszko I, Sienkiewicz M. Phenotypic and Genotypic Characteristics of Staphylococcus aureus Nasal Strains Isolated from Students of the Pomeranian Medical University in Szczecin, Poland: A Cross-Sectional Study. Toxins. 2026; 18(5):237. https://doi.org/10.3390/toxins18050237
Chicago/Turabian StyleKwiatkowski, Paweł, Helena Masiuk, Agata Pruss, Stefania Giedrys-Kalemba, Piotr Baszuk, Iwona Wojciechowska-Koszko, and Monika Sienkiewicz. 2026. "Phenotypic and Genotypic Characteristics of Staphylococcus aureus Nasal Strains Isolated from Students of the Pomeranian Medical University in Szczecin, Poland: A Cross-Sectional Study" Toxins 18, no. 5: 237. https://doi.org/10.3390/toxins18050237
APA StyleKwiatkowski, P., Masiuk, H., Pruss, A., Giedrys-Kalemba, S., Baszuk, P., Wojciechowska-Koszko, I., & Sienkiewicz, M. (2026). Phenotypic and Genotypic Characteristics of Staphylococcus aureus Nasal Strains Isolated from Students of the Pomeranian Medical University in Szczecin, Poland: A Cross-Sectional Study. Toxins, 18(5), 237. https://doi.org/10.3390/toxins18050237

