Structural Insights and Metabolic Profiles of Oxidized Green Coffee Extract, and Its Impact on Obesity and Gut Microbiota in High-Fat Diet-Fed Mice
Abstract
1. Introduction
2. Materials and Methods
2.1. Materials and Reagents
2.2. Preparation of Coffee Extract Sample
2.3. Determination of the Structural Characterization
2.3.1. Scanning Electron Microscopy Analysis
2.3.2. Ultraviolet–Visible–near Infrared Spectroscopy Analysis
2.3.3. X-Ray Diffraction Analysis
2.3.4. Fourier Transform Infrared Spectroscopy Analysis
2.4. The LC-MS Analysis of the Green Coffee Extract
2.5. Animal Experimental Design
2.6. Insulin Tolerance Measurements
2.7. Tissue Sample Collection
2.8. Determination of Biochemical Indicators
2.9. Gut Microbiome Analysis
2.10. Statistical Analysis
3. Results
3.1. Structural Characterization of the Coffee Extracts
3.2. Impact of Oxidized GCE on Metabolic Profiles of Mice
Classification of Differential Metabolites
3.3. Regulatory Effects of Coffee Extract Interventions on Blood Glucose, Blood Lipid Levels, and Liver Antioxidant in HFD-Fed Mice
3.4. Effects of Coffee Extract Interventions on Intestinal Microbiota in HFD-Fed Mice
3.5. Correlation Between Dominant Intestinal Bacteria and Obesity-Related Parameters
4. Discussion
5. Conclusions
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
Correction Statement
Abbreviations
| AST | Aspartate transaminase |
| AUC | Area under the curve |
| CGA | Chlorogenic acid |
| CQA | Caffeoylquinic acid |
| HFD | High-fat diet |
| KEGG | Kyoto Encyclopedia of Genes and Genomes |
| LDA | Linear discriminant analysis |
| NAFLD | Non-alcoholic fatty liver disease |
| NMDS | Non-metrological multidimensional scaling |
| PCA | Principal component analysis |
| PCoA | Principal coordinate component analysis |
| SEM | Standard error of the mean |
| TG | Triglycerides |
| ESI | Electro spray ionization; |
| VIP | Variable importance in projection. |
| TC | Total cholesterol |
Appendix A
| Ingredient | gm | kcal |
|---|---|---|
| Casein, 30 Mesh 200 | 200 | 800 |
| L-Cystine | 3 | 12 |
| Corn Starch | 0 | 0 |
| Maltodextrin 10 | 125 | 500 |
| Sucrose | 68.8 | 275.2 |
| Cellulose, BW200 | 50 | 0 |
| Soybean Oil | 25 | 225 |
| Lard | 245 | 2205 |
| Mineral Mix S10026 | 10 | 0 |
| DiCalcium Phosphate | 13 | 0 |
| Calcium Carbonate | 5.5 | 0 |
| Potassium Citrate, 1 H2O | 16.5 | 0 |
| Vitamin Mix V10001 | 10 | 40 |
| Choline Bitartrate | 2 | 0 |
| FD&C Blue Dye #1 | 0.05 | 0 |
| Ingredient | gm | kcal |
|---|---|---|
| Casein, 30 Mesh 200 | 200 | 800 |
| L-Cystine | 3 | 12 |
| Corn Starch | 506.2 | 2024.8 |
| Maltodextrin 10 | 125 | 500 |
| Sucrose | 68.8 | 275.2 |
| Cellulose, BW200 | 50 | 0 |
| Soybean Oil | 25 | 225 |
| Lard | 20 | 18 |
| Mineral Mix S10026 | 10 | 0 |
| DiCalcium Phosphate | 13 | 0 |
| Calcium Carbonate | 5.5 | 0 |
| Potassium Citrate, 1 H2O | 16.5 | 0 |
| Vitamin Mix V10001 | 10 | 40 |
| Choline Bitartrate | 2 | 0 |
| FD & C Yellow Dye # 5 | 0.04 | 0 |
| FD&C Blue Dye #1 | 0.01 | 0 |
Appendix B



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| Reagent/Material/Equipment | Supplier |
|---|---|
| Green coffee beans (Arabica-Cartier) | Baoshan Galaozhuang Agricultural and Sideline Products Development Co., Ltd. (Baoshan, China) |
| Edible baking soda | Hubei Yucheng E-commerce Co., Ltd. (Xianning, China) |
| Sodium anhydrous carbonate | Tianjin Zhiyuan Chemical Reagent Co., Ltd. (Tianjin, China) |
| Potassium and persulfate | Shanghai Maclin Biochemical Technology Co., Ltd. (Shanghai, China) |
| High-fat diet and low-fat diet (Normal control group of high-fat diet) | Research Diets, Inc. (New Brunswick, NJ, USA) |
| G3 independent ventilation cage IVC | Suzhou Suhang Science and Technology Equipment Co., Ltd. (Suzhou, China) |
| Corn cob bedding, wood chips | Kunming Triassic Biotechnology Co., Ltd. (Kunming, China) |
| TC, TG, HDL-C, LDL-C, MDA, GSH, SOD kit | Nanjing Jiancheng Biology Co., Ltd. (Nanjing, China) |
| Formic acid | Sigma-Aldrich (Shanghai, China) |
| Ammonium formate | Sigma-Aldrich (Shanghai, China) |
| DA5001 Silent oil-free air compressor | Jiangsu Dailuo Medical Technology Co., Ltd. (Suzhou, China) |
| Atomize and FD-1A-50 vacuum freeze-dryer | Shanghai Bilang Instrument Manufacturing Co., Ltd. (Shanghai, China) |
| Group | Raising Plan | Treatment Solution | Treatment Volume |
|---|---|---|---|
| ND | Low-fat feed | physiological saline | 1 g/kg |
| HFD | High-fat feed | physiological saline | |
| HFD+UC | High-fat feed | untreated coffee extract | |
| HFD+GCE | High-fat feed | oxidized green coffee extract |
| Ingredients | UC | GCE |
|---|---|---|
| Chlorogenic acid (mg/g) | 122.03 ± 0.87 | 81.83 ± 2.02 |
| Caffeine (mg/g) | 41.84 ± 0.28 | 41.20 ± 0.08 |
| Total phenols (mg/g) | 331.54 ± 0.48 | 341.37 ± 1.06 |
| Flavonoid (mg/g) | 63.10 ± 0.86 | 40.46 ± 1.18 |
| Total sugar (mg/g) | 294.85 ± 0.17 | 277.07 ± 3.30 |
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He, J.; Shan, L.; Yu, L.; Yu, L.; Jiang, X.; Shen, Y.; Du, Z.; Yu, R.; Zhao, C.; Du, X.; et al. Structural Insights and Metabolic Profiles of Oxidized Green Coffee Extract, and Its Impact on Obesity and Gut Microbiota in High-Fat Diet-Fed Mice. Nutrients 2026, 18, 638. https://doi.org/10.3390/nu18040638
He J, Shan L, Yu L, Yu L, Jiang X, Shen Y, Du Z, Yu R, Zhao C, Du X, et al. Structural Insights and Metabolic Profiles of Oxidized Green Coffee Extract, and Its Impact on Obesity and Gut Microbiota in High-Fat Diet-Fed Mice. Nutrients. 2026; 18(4):638. https://doi.org/10.3390/nu18040638
Chicago/Turabian StyleHe, Jun, Linxian Shan, Lihui Yu, Lijun Yu, Xingjiao Jiang, Yan Shen, Zezhu Du, Rongxian Yu, Cunchao Zhao, Xiaocui Du, and et al. 2026. "Structural Insights and Metabolic Profiles of Oxidized Green Coffee Extract, and Its Impact on Obesity and Gut Microbiota in High-Fat Diet-Fed Mice" Nutrients 18, no. 4: 638. https://doi.org/10.3390/nu18040638
APA StyleHe, J., Shan, L., Yu, L., Yu, L., Jiang, X., Shen, Y., Du, Z., Yu, R., Zhao, C., Du, X., Wang, H., Yang, R., & Fang, C. (2026). Structural Insights and Metabolic Profiles of Oxidized Green Coffee Extract, and Its Impact on Obesity and Gut Microbiota in High-Fat Diet-Fed Mice. Nutrients, 18(4), 638. https://doi.org/10.3390/nu18040638
