Development of a Multiplex PCR Method for Efficient Differential Diagnosis of Clinical Cases and Vaccine Immunization of Marek’s Disease
Abstract
1. Introduction
2. Materials and Methods
2.1. Ethics Statement
2.2. Viruses and Cells
2.3. Primer Design and Synthesis
2.4. Primer Test and Positive Control Plasmids
2.5. Establishment of a Multiplex PCR Method
2.6. Determination of the Specificity and Sensitivity of mPCR
2.7. Application of mPCR for Diagnosis of Clinical MD Cases
3. Results
3.1. Specificity of PCR Primers Designed for Amplifying the Viral meq and gB Genes
3.2. Optimal Primer Combination and Reaction Conditions for mPCR Amplification
3.3. Specificity and Sensitivity of Newly Developed mPCR Method for Detecting MDV
3.4. Clinical Application of mPCR for Diagnosis of MD Cases Differentiating Vaccination
4. Discussion
Supplementary Materials
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
References
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| Serotype | Target | Primer | Type | Sequence (5′-3′) | Length (nt) | Genomic Location | Amplicons (bp) |
|---|---|---|---|---|---|---|---|
| MDV-1 | S-meq/L-meq | meq-2F | 5′ | ATGTCTCAGGAGCCAGAGCCGGGCGCTAT | 29 | 133603–133631 a,b | 1020/1197 |
| meq-2R | 5′ | TCAGGGTCTCCCGTCACCTGGAAACCACCA | 30 | 134593–134622 a,b | |||
| MDV-2 | SB-1 gB | SB-1-1F | 5′ | TGCCCCATACCGTTGAACAATTCCGCC | 27 | 59051–59077 c | 789 |
| SB-1-1R | 5′ | GCAGAATTCCATGAGGGTCGC | 21 | 59513–59533 c | |||
| MDV-3 | HVT gB | SB-1-1F | 5′ | TGCCCCATACCGTTGAACAATTCCGCC | 27 | 59051–59077 c | 483 |
| HVT-8R | 5′ | CGCCTCGTCCGGCAAGGCCATCTTGA | 26 | 53806–53831 d |
| No. | Poultry Farm | Breeds | Category | Positive Rates of Virus Infection | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Spleen | Liver | Total | |||||||||||||
| S-meq | L-meq | HVT | SB-1 | S-meq | L-meq | HVT | SB-1 | S-meq | L-meq | HVT | SB-1 | ||||
| 1 | HNZMD | Liangfenghua | Broiler | 11/11 (100%) | 0/11 (0%) | 0/11 (0%) | 0/11 (0%) | 11/11 (100%) | 0/11 (0%) | 0/11 (0%) | 0/11 (0%) | 22/22 (100%) | 0/22 (0%) | 0/22 (0%) | 0/22 (0%) |
| 2 | HNXZ1 | Partridge chicken | Layer | 5/6 (83.3%) | 0/6 (0%) | 0/6 (0%) | 6/6 (100%) | 5/6 (83.3%) | 0/6 (0%) | 0/6 (0%) | 5/6 (83%) | 10/12 (83.3%) | 0/12 (0%) | 0/12 (0%) | 11/12 (91.6%) |
| 3 | HNZM | Partridge chicken | Broiler | 1/12 (8.3%) | 0/12 (0%) | 0/12 (0%) | 0/12 (0%) | 0/12 (0%) | 0/12 (0%) | 0/12 (0%) | 1/12 (8.3%) | 1/24 (4.2%) | 0/24 (0%) | 0/24 (0%) | 1/24 (4.2%) |
| 4 | HNXZ2 | Liangfenghua | Layer | 0/3 (0%) | 0/3 (0%) | 0/3 (0%) | 0/3 (0%) | 0/3 (0%) | 0/3 (0%) | 0/3 (0%) | 0/3 (0%) | 0/6 (0%) | 0/6 (0%) | 0/6 (0%) | 0/6 (0%) |
| 5 | HNYY1 | Jinghong | Layer | 15/15 (100%) | 0/15 (0%) | 0/15 (0%) | 14/15 (93.3%) | 13/15 (86.6%) | 0/15 (0%) | 0/15 (0%) | 12/15 (80%) | 28/30 (93.3%) | 0/30 (0%) | 0/30 (0%) | 26/30 (86.6%) |
| 6 | HNLK1 | Hyline Brown | Layer | 4/15 (26.6%) | 1/15 (6.6%) | 0/15 (0%) | 13/15 (86.6%) | 2/15 (13.3%) | 0/15 (0%) | 0/15 (0%) | 11/15 (73.3%) | 6/30 (20%) | 1/30 (3.3%) | 0/30 (0%) | 24/30 (80%) |
| 7 | HNLK2 | Jinghong | Layer | 3/9 (33.3%) | 1/9 (11.1%) | 0/9 (0%) | 7/9 (77.8%) | 0/9 (0%) | 0/9 (0%) | 1/9 (11.1%) | 8/9 (88.9%) | 3/18 (16.6%) | 1/18 (5.5%) | 1/18 (5.5%) | 15/18 (83.3%) |
| 8 | HNZC1 | Jinghong | Layer | 6/6 (100%) | 0/6 (0%) | 0/6 (0%) | 5/6 (83.3%) | 5/6 (83.3%) | 0/6 (0%) | 0/6 (0%) | 4/6 (66.7%) | 11/12 (91.6%) | 0/12 (0%) | 0/12 (0%) | 9/12 (75%) |
| 9 | HNSQ1 | Jinghong | Layer | 11/12 (91.6%) | 0/12 (0%) | 0/12 (0%) | 4/12 (33.3%) | 10/12 (83.3%) | 0/12 (0%) | 0/12 (0%) | 3/12 (25%) | 21/24 (87.5%) | 0/24 (0%) | 0/24 (0%) | 7/24 (29.1%) |
| 10 | HNLY1 | Jinghong | Layer | 4/4 (100%) | 0/4 (0%) | 0/4 (0%) | 1/4 (25%) | 4/4 (100%) | 0/4 (0%) | 0/4 (0%) | 1/4 (25%) | 8/8 (100%) | 0/8 (0%) | 0/8 (0%) | 2/8 (25%) |
| 11 | HNYC1 | Jinghong | Layer | 8/9 (88.9%) | 0/9 (0%) | 0/9 (0%) | 8/9 (88.9%) | 4/9 (44.4%) | 0/9 (0%) | 0/9 (0%) | 5/9 (55.5%) | 12/18 (66.7%) | 0/18 (0%) | 0/18 (0%) | 13/18 (72.2%) |
| 12 | SDCX1 | Jinghong | Layer | 9/9 (100%) | 0/9 (0%) | 0/9 (0%) | 8/9 (88.9%) | 9/9 (100%) | 0/9 (0%) | 0/9 (0%) | 8/9 (88.9%) | 18/18 (100%) | 0/18 (0%) | 0/18 (0%) | 16/18 (88.9%) |
| 13 | SDSX | Jinghong | Layer | 2/7 (28.5%) | 0/7 (0%) | 0/7 (0%) | 5/7 (71.4%) | 2/7 (28.5%) | 0/7 (0%) | 0/7 (0%) | 2/7 (28.5%) | 4/14 (28.5%) | 0/14 (0%) | 0/14 (0%) | 7/14 (50%) |
| 14 | SDCW | Hyline Brown | Layer | 9/11 (81.8%) | 0/11 (0%) | 0/11 (0%) | 3/11 (27.3%) | 9/11 (81.8%) | 0/11 (0%) | 0/11 (0%) | 3/11 (27%) | 18/22 (81.8%) | 0/22 (0%) | 0/22 (0%) | 6/22 (27.2%) |
| 15 | SDCX2 | Jinghong | Layer | 6/7 (85.7%) | 0/7 (0%) | 0/7 (0%) | 7/7 (100%) | 5/7 (71.4%) | 0/7 (0%) | 0/7 (0%) | 7/7 (100%) | 11/14 (78.5%) | 0/14 (0%) | 0/14 (0%) | 14/14 (100%) |
| 16 | HNSQ2 | Jinghong | Layer | 4/5 (80%) | 0/5 (0%) | 0/5 (0%) | 3/5 (60%) | 4/5 (80%) | 0/5 (0%) | 0/5 (0%) | 3/5 (60%) | 8/10 (80%) | 0/10 (0%) | 0/10 (0%) | 6/10 (60%) |
| 17 | HNSC | Hyline Brown | Layer | 13/14 (92.8%) | 0/14 (0%) | 0/14 (0%) | 10/14 (71.4%) | 13/14 (92.8%) | 0/14 (0%) | 0/14 (0%) | 9/14 (64.2%) | 26/28 (92.8%) | 0/28 (0%) | 0/28 (0%) | 19/28 (67.8%) |
| 18 | HNYC2 | Jinghong | Layer | 13/14 (92.8%) | 0/14 (0%) | 0/14 (0%) | 6/14 (42.8%) | 9/14 (64.2%) | 0/14 (0%) | 0/14 (0%) | 2/14 (14.2%) | 22/28 (78.5%) | 0/28 (0%) | 0/28 (0%) | 8/28 (28.5%) |
| 19 | HNZC2 | Jinghong | Layer | 11/12 (91.6%) | 0/12 (0%) | 0/12 (0%) | 7/12 (58.3%) | 11/12 (91.6%) | 0/12 (0%) | 0/12 (0%) | 7/12 (58.3%) | 22/24 (91.6%) | 0/24 (0%) | 0/24 (0%) | 14/24 (58.4%) |
| 20 | HNXZ3 | Partridge chicken | Breeder | 5/8 (62.5%) | 0/8 (0%) | 0/8 (0%) | 5/8 (62.5%) | 4/8 (50%) | 0/8 (0%) | 0/8 (0%) | 3/8 (37.5%) | 9/16 (56.2%) | 0/16 (0%) | 0/16 (0%) | 8/16 (50%) |
| 21 | HNQX | Jinghong | Layer | 9/9 (100%) | 0/9 (0%) | 0/9 (0%) | 3/9 (33.3%) | 9/9 (100%) | 0/9 (0%) | 0/9 (0%) | 2/9 (22.2%) | 18/18 (100%) | 0/18 (0%) | 0/18 (0%) | 5/18 (27.8%) |
| 22 | HNZC3 | Jinghong | Layer | 3/5 (60%) | 0/5 (0%) | 0/5 (0%) | 4/5 (80%) | 2/5 (40%) | 0/5 (0%) | 0/5 (0%) | 4/5 (80%) | 5/10 (50%) | 0/10 (0%) | 0/10 (0%) | 8/10 (80%) |
| 23 | HNYY2 | Jinghong | Layer | 0/5 (0%) | 3/5 (60%) | 0/5 (0%) | 1/5 (20%) | 0/5 (0%) | 1/5 (20%) | 0/5 (0%) | 0/5 (0%) | 0/10 (0%) | 4/10 (40%) | 0/10 (0%) | 1/10 (10%) |
| 24 | HNPDS | Hyline Brown | Layer | 0/6 (0%) | 0/6 (0%) | 0/6 (0%) | 6/6 (100%) | 0/6 (0%) | 0/6 (0%) | 0/6 (0%) | 6/6 (100%) | 0/12 (0%) | 0/12 (0%) | 0/12 (0%) | 12/12 (100%) |
| 25 | HNLY2 | Jinghong | Layer | 0/6 (0%) | 0/6 (0%) | 0/6 (0%) | 4/6 (66.7%) | 0/6 (0%) | 0/6 (0%) | 0/6 (0%) | 2/6 (33.3%) | 0/12 (0%) | 0/12 (0%) | 0/12 (0%) | 6/12 (50%) |
| 26 | HNZC4 | Hyline Brown | Layer | 5/8 (62.5%) | 0/8 (0%) | 0/8 (0%) | 6/8 (75%) | 6/8 (75%) | 0/8 (0%) | 0/8 (0%) | 6/8 (75%) | 11/16 (68.7%) | 0/16 (0%) | 0/16 (0%) | 13/16 (81.25%) |
| 27 | HNSX | Jinghong | Layer | 5/5 (100%) | 0/5 (0%) | 0/5 (0%) | 0/5 (0%) | 5/5 (100%) | 0/5 (0%) | 0/5 (0%) | 0/5 (0%) | 10/10 (100%) | 0/10 (0%) | 0/10 (0%) | 0/10 (0%) |
| 28 | HNZC5 | Jinghong | Layer | 5/7 (71.4%) | 0/7 (0%) | 0/7 (0%) | 0/7 (0%) | 5/7 (71.4%) | 0/7 (0%) | 0/7 (0%) | 1/7 (14.2%) | 10/14 (71.4%) | 0/14 (0%) | 0/14 (0%) | 1/14 (7.1%) |
| 29 | HNFQ | Hyline Brown | Layer | 1/11 (9%) | 0/11 (0%) | 0/11 (0%) | 11/11 (100%) | 0/11 (0%) | 0/11 (0%) | 0/11 (0%) | 11/11 (100%) | 1/22 (4.5%) | 0/22 (0%) | 0/22 (0%) | 22/22 (100%) |
| 30 | HNWS | Muyuan Red | Layer | 1/20 (5%) | 7/20 (35%) | 0/20 (0%) | 18/20 (90%) | UA | UA | UA | UA | 1/20 (5%) | 7/20 (35%) | 0/20 (0%) | 18/20 (90%) |
| Total | NA | NA | 169/271 (62.4%) | 12/271 (4.4%) | 0/271 (0%) | 165/271 (60.9%) | 147/251 (58.6%) | 1/251 (0.4%) | 1/251 (0.4%) | 127/251 (50.6%) | 316/522 (60.5%) | 13/522 (2.5%) | 1/522 (0.2%) | 292/522 (55.9%) | |
| No. | Poultry Farm | Breeds | Category | Positive Rates | |||||
|---|---|---|---|---|---|---|---|---|---|
| mPCR | PCR | ||||||||
| meq Genes | meq Genes | ||||||||
| S-meq | L-meq | S-meq + L-meq | S-meq | L-meq | S-meq + L-meq | ||||
| 1 | HNSQ1 | Jinghong | Layer | 9/10 (90%) | 0/10 (0%) | 9/10 (90%) | 9/10 (90%) | 0/10 (0%) | 9/10 (90%) |
| 2 | SDCW | Hyline Brown | Layer | 7/10 (70%) | 0/10 (0%) | 7/10 (70%) | 8/10 (80%) | 0/10 (0%) | 8/10 (80%) |
| 3 | HNSC | Hyline Brown | Layer | 9/10 (90%) | 0/10 (0%) | 9/10 (90%) | 9/10 (90%) | 0/10 (0%) | 9/10 (90%) |
| 4 | HNZC2 | Jinghong | Layer | 9/10 (90%) | 0/10 (0%) | 9/10 (90%) | 9/10 (90%) | 0/10 (0%) | 9/10 (90%) |
| 5 | SDCX1 | Jinghong | Layer | 9/10 (90%) | 0/10 (0%) | 9/10 (90%) | 9/10 (90%) | 0/10 (0%) | 9/10 (90%) |
| 6 | HNQX | Jinghong | Layer | 10/10 (100%) | 0/10 (0%) | 10/10 (100%) | 10/10 (100%) | 0/10 (0%) | 10/10 (100%) |
| 7 | HNYC2 | Jinghong | Layer | 10/10 (100%) | 0/10 (0%) | 10/10 (100%) | 10/10 (100%) | 0/10 (0%) | 10/10 (100%) |
| 8 | HNWS | Muyuan Red | Layer | 1/10 (10%) | 5/10 (50%) | 6/10 (60%) | 1/10 (60%) | 5/10 (0%) | 6/10 (60%) |
| 9 | HNZMD | Liangfenghua | Broiler | 10/10 (100%) | 0/10 (0%) | 10/10 (100%) | 10/10 (100%) | 0/10 (0%) | 10/10 (100%) |
| 10 | HNFQ | Hyline Brown | Layer | 1/10 (10%) | 0/10 (0%) | 1/10 (10%) | 1/10 (10%) | 0/10 (0%) | 1/10 (10%) |
| Total | 75/100 (75%) | 5/100 (5%) | 80/100 (80%) | 76/100 (76%) | 5/100 (5%) | 81/100 (81%) | |||
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Zhang, W.-K.; Teng, M.; Zheng, L.-P.; Shi, B.; Wang, W.-D.; Li, G.-X.; Zhao, Y.-X.; Yang, Z.; Yu, Z.-H.; Luo, J. Development of a Multiplex PCR Method for Efficient Differential Diagnosis of Clinical Cases and Vaccine Immunization of Marek’s Disease. Viruses 2026, 18, 471. https://doi.org/10.3390/v18040471
Zhang W-K, Teng M, Zheng L-P, Shi B, Wang W-D, Li G-X, Zhao Y-X, Yang Z, Yu Z-H, Luo J. Development of a Multiplex PCR Method for Efficient Differential Diagnosis of Clinical Cases and Vaccine Immunization of Marek’s Disease. Viruses. 2026; 18(4):471. https://doi.org/10.3390/v18040471
Chicago/Turabian StyleZhang, Wen-Kai, Man Teng, Lu-Ping Zheng, Bin Shi, Wei-Dong Wang, Gui-Xi Li, Yong-Xu Zhao, Zhen Yang, Zu-Hua Yu, and Jun Luo. 2026. "Development of a Multiplex PCR Method for Efficient Differential Diagnosis of Clinical Cases and Vaccine Immunization of Marek’s Disease" Viruses 18, no. 4: 471. https://doi.org/10.3390/v18040471
APA StyleZhang, W.-K., Teng, M., Zheng, L.-P., Shi, B., Wang, W.-D., Li, G.-X., Zhao, Y.-X., Yang, Z., Yu, Z.-H., & Luo, J. (2026). Development of a Multiplex PCR Method for Efficient Differential Diagnosis of Clinical Cases and Vaccine Immunization of Marek’s Disease. Viruses, 18(4), 471. https://doi.org/10.3390/v18040471

