Triptonide Suppresses AML via PI3K/AKT Signaling: A Network Pharmacology Approach Validated by Molecular Docking and Experimental Studies
Abstract
1. Introduction
2. Materials and Methods
2.1. Network Pharmacology Investigation of TN Against AML
2.1.1. Target Prediction for TN
2.1.2. Retrieval of AML-Associated Genes
2.1.3. Identification of Common Targets and Construction of the PPI Network
2.1.4. Functional Enrichment Analysis of the Common Targets
2.1.5. Selection of Core Genes
2.2. Molecular Docking
2.3. Molecular Dynamics Simulation
2.4. Data Collection and Processing
2.5. Cell Viability Assay
2.6. Apoptosis Assay
2.7. Western Blotting
2.8. Animal Experiments
2.9. Hematoxylin and Eosin (H&E) Staining
2.10. Immunohistochemical Staining
2.11. Statistical Analysis
3. Results
3.1. Network Pharmacology Analysis of TN in AML Treatment
3.2. Molecular Docking of TN and the Hub Proteins
3.3. DEGs Screening and PI3K/AKT Pathway Enrichment Analysis via the GEPIA2 Database
3.4. Molecular Dynamics Simulation for TN and Core Protein
3.5. Effects of TN on U937 Cell Proliferation
3.6. TN Effectively Inhibits Tumor Formation in U937 Cells in Vivo
4. Discussion
5. Conclusions
Supplementary Materials
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
Abbreviations
| AML | Acute myeloid leukemia |
| BP | Biological Process |
| CC | Cellular Component |
| DEGs | Differentially expressed genes |
| GO | Gene Ontology |
| GSEA | Gene set enrichment analysis |
| HSCT | Hematopoietic stem cell transplantation |
| KEGG | Kyoto Encyclopedia of Genes and Genomes |
| LSCs | Leukemia stem cells |
| MCC | Maximal clique centrality |
| MD | Molecular dynamics |
| MF | Molecular Function |
| R/R | Relapsed/refractory |
| RMSDs | Root mean square deviations |
| RMSFs | Root mean square fluctuations |
| TCM | Traditional Chinese medicine |
| TN | Triptonide |
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| No. | Uniprot ID | Gene Symbol | Protein Name |
|---|---|---|---|
| 1 | P31749 | AKT1 | RAC-alpha serine/threonine-protein kinase |
| 2 | P00533 | EGFR | Epidermal growth factor receptor |
| 3 | P07900 | HSP90AA1 | Heat shock protein HSP 90-alpha |
| 4 | P08238 | HSP90AB1 | Heat shock protein HSP 90-beta |
| 5 | P27986 | PIK3R1 | Phosphatidylinositol 3-kinase regulatory subunit alpha |
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Share and Cite
Song, L.; Meng, J.; Li, H.; Fu, W.; Hong, K.; Shen, S.; Zhang, Z.; Ding, S.; Li, S.; Zhang, Z.; et al. Triptonide Suppresses AML via PI3K/AKT Signaling: A Network Pharmacology Approach Validated by Molecular Docking and Experimental Studies. Curr. Issues Mol. Biol. 2026, 48, 239. https://doi.org/10.3390/cimb48030239
Song L, Meng J, Li H, Fu W, Hong K, Shen S, Zhang Z, Ding S, Li S, Zhang Z, et al. Triptonide Suppresses AML via PI3K/AKT Signaling: A Network Pharmacology Approach Validated by Molecular Docking and Experimental Studies. Current Issues in Molecular Biology. 2026; 48(3):239. https://doi.org/10.3390/cimb48030239
Chicago/Turabian StyleSong, Lixia, Jing Meng, Huijie Li, Wanxin Fu, Kun Hong, Shengnan Shen, Zheping Zhang, Shilan Ding, Shengpeng Li, Zifan Zhang, and et al. 2026. "Triptonide Suppresses AML via PI3K/AKT Signaling: A Network Pharmacology Approach Validated by Molecular Docking and Experimental Studies" Current Issues in Molecular Biology 48, no. 3: 239. https://doi.org/10.3390/cimb48030239
APA StyleSong, L., Meng, J., Li, H., Fu, W., Hong, K., Shen, S., Zhang, Z., Ding, S., Li, S., Zhang, Z., Bei, W., Huo, H., Tan, Y., Sui, F., & Liu, L. (2026). Triptonide Suppresses AML via PI3K/AKT Signaling: A Network Pharmacology Approach Validated by Molecular Docking and Experimental Studies. Current Issues in Molecular Biology, 48(3), 239. https://doi.org/10.3390/cimb48030239

