1. Introduction
The influenza A virus, which can infect many species, is the main type of influenza virus that leads to outbreaks and global pandemics [
1,
2]. This virus can be further classified according to the glycoproteins on its envelope surface: hemagglutinin (HA) and neuraminidase (NA). Hemagglutinin has 18 different molecules (H1–H18), while neuraminidase has 11 molecules (N1–N11) [
3]. At present, it has been confirmed that the serotypes that can infect humans include H1N1, H2N2, H3N2, H5N1, H1N2, H7N2, H7N3, H7N7, H7N9, H9N2, and H10N7, among which H1N1 and H3N2 are the main influenza A viruses that are routinely transmitted in humans [
4,
5].
The mechanism by which the influenza A virus causes influenza A depends on its replication in host cells. Generally, HA attaches the virus to the cell surface by binding to sialic acid and facilitates the virus’s entry into the cell to release genetic material [
6]. The genome of the influenza A virus entering the host cell contains a total of eight RNA gene segments, of which the influenza A virus RNA polymerase that regulates the RNA synthesis of the virus is encoded by the first three sequences [
3,
7]. The influenza A virus RNA polymerase is a complex composed of polymerase basic protein 1 (PB1), polymerase basic protein 2 (PB2), and polymerase acidic protein (PA), which binds to the viral promoter [
4]. The PB2 subunit is an essential part of the RNA polymerase, recognizing and “snatching” the 5′-capped primer of the host cell’s pre-mRNA, which is subsequently cleaved by PA as a primer for viral RNA synthesis, and then the viral RNA is used as a template to initiate viral RNA synthesis under the action of PB1 [
8]. RNA fragments 4, 5, and 6 encode the viral glycoprotein HA, the viral nucleoprotein, and NA, respectively. RNA fragment 7 encodes a matrix protein (M1) and a membrane protein (M2). The M1 protein is involved in regulating the transport of viral RNA fragments in cells, while the M2 protein is a proton ion channel necessary for viral entry and exit [
9]. The NS1 protein encoded by RNA fragment eight is a virulence factor that inhibits host antiviral responses [
3]. Viral replication leads to the death of host cells, and NA can inhibit the binding of HA of new virus particles to sialic acid on the membranes of infected host cells to promote viral transmission [
10] (
Figure 1).
Anti-influenza drugs play a vital role in the prevention and treatment of influenza A. There are three kinds of anti-influenza drugs for treatment: NA inhibitors such as oseltamivir; RNA polymerase inhibitors such as baloxavir (mainly targeting PA); and M2-type ion channel blockers that inhibit the virus’s release of nucleic acids to host cells, such as amantadine and rimantadine [
11,
12]. However, amantadine and rimantadine are no longer recommended for the prevention and treatment of influenza A due to its high drug resistance [
13]. Currently, the approved anti-influenza-A drugs—such as the NA inhibitor oseltamivir and the RNA polymerase inhibitor baloxavir—have achieved significant efficacy in clinical anti-influenza-A treatment. However, the emergence of oseltamivir- and baloxavir-resistant strains has made them less effective, especially in children and immunocompromised individuals with higher viral loads [
14,
15,
16]. In 2007, the oseltamivir-resistant influenza A (H1N1) virus caused a global pandemic. In 2010–2011, an increasing number of oseltamivir-resistant cases were recognized [
17]. Resistance to oseltamivir has also been reported in influenza A (H3N2) viruses, but less frequently than in influenza A (H1N1) viruses [
3]. In addition, reduced susceptibility of the A/WSN/33(H1N1) virus to baloxavir has been reported [
18]. Therefore, it is urgent to develop drugs that can effectively inhibit influenza A virus infection, especially for oseltamivir- and baloxavir-resistant virus strains (
Figure 1).
ZSP1273 is a novel anti-influenza-A drug that targets RNA polymerase, which can effectively inhibit influenza A virus replication. The introduction of cypropyl into position six of VX-787′s molecular pyrimidine ring can cleverly occupy the hydrophobic binding pocket, greatly improving the antiviral activity of the compound. Meanwhile, in order to further balance the physical and chemical properties of the compound, ZSP1273 can be obtained by replacing azazindole with azazindazole (
Figure 1). The purpose of this study was to explore the antiviral activity of ZSP1273 using in vitro and in vivo models—especially against oseltamivir- and baloxavir-resistant virus strains—and to evaluate the safety and pharmacokinetics of ZSP1273.
3. Discussion
Frequent mutations of HA and NA in the influenza A virus lead to decreases in its sensitivity to traditional antiviral drugs [
22]. Moreover, the variable emergence of resistance to marketed drugs and the limited time window after infection within which these agents are active [
19] mean that there is an urgent need to develop new anti-influenza drugs due to the limitations of approved agents. RNA polymerase is a pivotal enzyme regulating the replication of the influenza A virus [
23,
24]. The gene sequence that regulates the subunits of RNA polymerase is highly conserved, making it an attractive target for current anti-influenza-A drug research [
25]. ZSP1273 is a novel RNA polymerase inhibitor that potentially targets the PB2 subunit. In this study, we found that ZSP1273 was effective against multiple strains of the influenza A virus, including oseltamivir-resistant strains, baloxavir-resistant strains, and highly pathogenic avian influenza viruses. Moreover, the antiviral efficacy of ZSP1273 on influenza A was evaluated in murine models and a ferret model.
RNA polymerase inhibitors are currently being studied for their ability to target the PA subunit and PB2 subunits. Favipiravir is the first broad-spectrum antiviral inhibitor targeting RNA polymerase to be approved for influenza treatment in Japan [
26]. Baloxavir is an RNA polymerase inhibitor targeting the PA subunit, and it has also been approved as a clinical treatment for influenza A [
21]. VX-787 is a novel influenza A virus PB2 inhibitor that has been proven to effectively inhibit influenza A virus infection in preclinical studies [
27,
28]. In this study, favipiravir, baloxavir, and VX-787 were used as reference compounds to evaluate the anti-influenza-A-virus activity of ZSP1273. In the structural design of ZSP1273, the introduction of cypropyl into position six of VX-787′s molecular pyrimidine ring can cleverly occupy the hydrophobic binding pocket, greatly improving the antiviral activity of the compound with the help of computer-aided drug design technology. In fact, the binding activity of ZSP1273 against influenza A polymerase has been confirmed in vitro. The research on ZSP1273′s inhibition of influenza A polymerase activity showed that the IC
50 of ZSP1273 was 0.562 ± 0.116 nM, while the IC
50 values of favipiravir and VX-787 were 34,087.67 ± 16,009.21 nM and 1.449 ± 0.34 nM, respectively, indicating that ZSP1273 had a better inhibitory effect on influenza A virus RNA polymerase activity than the inhibitor VX-787 (with the same target) and the pan-RNA polymerase inhibitor favipiravir. The non-target kinase assay, GPCR assay, and hERG assay confirmed that ZSP1273 has good biological safety. In addition, ZSP1273 showed no inhibitory activity against HBV, HCV, HRV, EV71, RSV, HPIV-3, or HSV-1, indicating the high specificity of ZSP1273 for influenza A virus infection.
The high mutagenicity of the influenza A virus has led to the emergence of multiple drug-resistant strains. During the 2008–2009 influenza season, more than 90% of seasonal influenza A (H1N1) viruses in many countries reported resistance to oseltamivir [
29]. A previous study reported that oseltamivir resistance is mainly due to the H275Y mutation—a conformational change that occurs at the binding site of the neuraminidase inhibitor, preventing binding of oseltamivir [
30]. The PI38T site mutation of the H1N1 and H3N2 virus strains caused by baloxavir reduced the sensitivity of the virus strain to baloxavir [
21,
31]. The PA I38T substitution is a major pathway for reduced susceptibility to Baloxavir, with 30-50-fold EC
50 changes in the influenza A virus [
32]. The emergence of viral strains that are resistant to these licensed drugs makes the development of new anti-influenza drugs particularly important. In this study, ZSP1273 exhibited high inhibitory activity against all tested influenza A virus strains, with mean EC
50 values ranging from 0.012 to 0.063 nM. In comparison to the activity of oseltamivir against the wild-type influenza virus A/Weiss/43 (H1N1), which has been reported to be resistant to oseltamivir treatment, ZSP1273 demonstrated significant inhibitory activity. Furthermore, ZSP1273 exhibited an EC
50 value of 0.028 nM against baloxavir-resistant influenza A/PR/8/34 (H1N1). The above results indicate that ZSP1273 could effectively inhibit influenza A virus infection, especially for oseltamivir-resistant and baloxavir-resistant virus strains. These results provide supporting data for the potential use of ZSP1273 in clinical treatment against influenza viruses—in particular, to address the problem of resistance to existing drugs. In vivo, murine models and ferret models of H1N1 virus infection were selected to analyze the preventive and therapeutic effects of ZSP1273 against influenza A. In the murine pharmacology studies, in terms of the time of administration, ZSP1273, oseltamivir, and VX-787 at doses of 10 mg/kg all improved the survival of mice within 4 h before infection or 48 h after infection. However, after 72 h of H1N1 infection, administration of ZSP1273 could only partially protect the virus-infected mice, while administration of oseltamivir (10 mg/kg) and VX-787 (10 mg/kg) exhibited no protective effect on the mice. Even 96 h after infection, ZSP1273 extended the time it took for all animals to die, indicating that ZSP1273 has a longer therapeutic window. Moreover, when conducting experiments on different species of ferrets, ZSP1273 performed more effectively than VX-787 in terms of virus growth inhibition, infection prevention, and nasal symptom remission in ferret models. These results further indicate that ZSP1273 has more advantages over VX-787 in terms of antiviral action.
Meanwhile, oseltamivir did not perform well in murine models, but ZSP1273 was better than VX-787 and oseltamivir in reducing viral titers within 3 days, and on the 5th day, ZSP1273 still had an inhibitory effect that was significantly greater than that of oseltamivir. Even if we used higher doses later, there were still four, five, and six deaths in the VX-787, oseltamivir, and favipiravir groups at 100 mg/kg, respectively, while only one animal died in the ZSP1273 group, suggesting that a high dose of ZSP1273 was still more effective and safer than oseltamivir. In the lethal model, the ZSP1273 high-dose and combination groups achieved zero mortality, which was better than the oseltamivir, VX-787, and baloxavir monotherapy groups. Meanwhile, in the non-lethal model, all administration groups except oseltamivir showed a significantly reduced lung index, and the viral titers in lung tissue were reduced to zero in all dosage groups of ZSP1273. Further, the combined dosage group, which achieved zero mortality, was significantly better than the oseltamivir monotherapy group. The results of these experiments show that ZSP1273 has very good efficacy and potential for combination use. The results of this series of studies once again demonstrate that ZSP1273 can effectively inhibit viral replication in vivo and successfully eliminate or attenuate influenza virus infection in mice.
Additionally, the problem of resistance to oseltamivir and baloxavir [
10], along with adverse effects after the clinical use of oseltamivir—such as inhibiting the production of viral antigens, leading to a reduction in acquired antiviral humoral immunity and increasing the probability of reinfection [
33]—mean that there is an urgent need for a new drug that is effective against drug-resistant strains and can be combined with oseltamivir to improve the efficiency of drug use.
Pharmacokinetic studies of ZSP1273 were conducted using SD rats, beagle dogs, and BALB/c mice. After single intravenous doses, ZSP1273 was slowly and moderately eliminated from SD rats and beagle dogs. After a single intragastric administration of ZSP1273 at different doses in SD rats and beagle dogs, the Cmax and AUC0-last of ZSP1273 were positively correlated with the administered doses, and there were no significant gender differences in the two parameters for rats and dogs. After repeated intragastric administration of ZSP1273, the Cmax and AUC0-last of male and female SD rats and beagle dogs showed no significant changes, and no accumulation was observed. In the in vivo study of BALB/c mice (infected with influenza A virus), after repeated oral gavage of ZSP1273, Cmax and AUC0-last were positively correlated with the dose level and were significantly higher than the increase in the dose ratio. These results indicate that ZSP1273 has good pharmacokinetic characteristics and is suitable for oral administration.
In conclusion, ZSP1273 is a novel influenza A virus RNA polymerase inhibitor. In vitro and in vivo models showed that ZSP1273 could effectively inhibit influenza A virus infection and exhibit high safety. ZSP1273 is a promising drug for the prevention and treatment of influenza A. The targeting of oseltamivir- and baloxavir-resistant viral strains will have more potential for development.
4. Materials and Methods
4.1. Chemicals, Viruses, and Cell Cultures
Chemicals: ZSP1273 was supplied by WuXi AppTec (Shanghai, China) Co., Ltd. and prepared as a 10 mM stock solution in 100% dimethyl sulfoxide (DMSO). VX-787 was supplied by WuXi AppTec (Shanghai, China) Co., Ltd. and prepared as a 10 mM stock solution in 100% dimethyl sulfoxide (DMSO). Favipiravir was supplied by Sichuan Nanbu Chengxin Technology Co., Ltd. (Nanchong, China). and prepared as a 10 mM stock solution in 100% dimethyl sulfoxide (DMSO). Oseltamivir was supplied by Toronto Research Chemicals and prepared as a 20 mM stock solution in 100% dimethyl sulfoxide (DMSO). Baloxavir was supplied by Shanghai Scochem Technology Co., Ltd. (Shanghai, China)—and prepared as a 20 mM stock solution in 100% dimethyl sulfoxide (DMSO).
Viruses: A/Anhui/01/2013 (H7N9) was obtained from the Chinese Center for Disease Control and Prevention; A/Qingyuan/GIRD01/2017 (H7N9) and A/Guangzhou/39715/2014 (H5N6) were clinical isolates, which were stored in the class III biosafety laboratory of the Guangdong Entry-Exit Inspection and Quarantine Bureau Inspection and Quarantine Technology Center. Influenza virus A/Mal/302/54 (H1N1), Influenza virus A/Hong Kong/8/68 (H3N2), influenza virus A/PR/8/34 (H1N1), influenza virus A/WS/33 (H1N1), influenza virus A/Weiss/43(H1N1), influenza virus B/Lee/40, influenza virus A/California/07/2009 (H1N1) pdm09, influenza virus A/California/2/2014 (H3N2), human rhinovirus (HRV), respiratory syncytial virus (RSV), herpes simplex virus 1 (HSV-1), and human parainfluenza virus type 3 (HPIV-3) were all purchased from the American Type Culture Collection (ATCC). Influenza virus A/WSN/33 (H1N1) was obtained from Virapur. Oseltamivir-resistant influenza virus strains A/Weiss/43 (H1N1)-4 and oseltamivir-resistant influenza virus strain A/Weiss/43 (H1N1)-5 were screened by WuXi AppTec (Shanghai) Co., Ltd. Human enterovirus 71 (EV71) was acquired from Xiamen University. Hepatitis C virus (HCV) replicon was constructed by WuXi AppTec (Shanghai) Co., Ltd. Hepatitis B virus (HBV) was obtained from the Wuhan Institute of Virology, Chinese Academy of Sciences. The baloxavir-resistant influenza A/PR/8/34 (H1N1) used in this experiment was provided by WuXi.
Cells: The Madin–Darby canine kidney (MDCK) cells were kindly donated by Prof. Malik Peiris of the University of Hong Kong. HEp-2 cells (ATCC) were cultured in DMEM/F12 medium containing 10% fetal bovine serum (FBS), 100 U/mL penicillin, and 100 g/mL streptomycin. H1 HeLa cells (ATCC) were cultured in DMEM medium supplemented with 3% FBS, 1% non-essential amino acid (NEAA), 100 U/mL penicillin, and 100 g/mL streptomycin. HepG2.2.15 cells (Wuhan Institute of Virology, Chinese Academy of Sciences) were maintained in DEME/F12 medium containing 2% FBS, 2 mM glutamine, 1% NEAA, 100 U/mL penicillin, and 100 g/mL streptomycin. Vero E6 cells (Wuhan Institute of Virology, Chinese Academy of Sciences) were cultured in DMEM medium supplemented with 2% FBS, 1% NEAA, 100 U/mL penicillin, and 100 g/mL streptomycin. Rhabdomyoma (RD) cells (Cell Bank of the Chinese Academy of Sciences, Shanghai, China) were cultured in DMEM medium containing 2% FBS, 1% sodium pyruvate, 1% NEAA, 2 mM glutamine, 100 U/mL penicillin, and 100 g/mL streptomycin. LLC-MK2 cells (Cell Bank of the Chinese Academy of Sciences, Shanghai, China) were maintained in DMEM medium containing 2% FBS, 1% NEAA, 2 mM glutamine, 100 U/mL penicillin, and 100 g/mL streptomycin. HCV genotype 1b (GT-1b) replicon cells were constructed by WuXi AppTec (Shanghai) Co., Ltd., and cultured in DMEM medium containing 10% FBS, 1% NEAA, 2 mM glutamine, 100 U/mL penicillin, 100 g/mL streptomycin, and 250 g/mL G418. The 293T cells, provided by Professor Chen Honglin from the University of Hong Kong, were maintained in DMEM medium with 10% FBS and 300 μg/mL G418. CHO cells were cultured in DMEM/F12 medium with 10% FBS, 300 μg/mL G418, and 2 μg/mL blasticidin. MDCK cells (ATCC) were cultured in EMEM medium supplemented with 10% FBS, 2 mM L-glutamine, 1% NEAA, 100 U/mL penicillin, and 100 g/mL streptomycin. OptiPRO SFM supplemented with 2 mM L-glutamine, 1% NEAA, 100 U/mL penicillin, 100 g/mL streptomycin, and 2.5 μg/mL trypsin was used as the assay medium.
4.2. Inhibition Assay of Influenza Virus Polymerase
The PB1, PB2, NP, and PA genes from A/California/04/2009 (H1N1) pdm09 were subcloned into a phw2000 plasmid. A pPHY luciferase plasmid (Promega) and a Renilla plasmid were used as a polymerase activity reporter and a transfection efficiency control, respectively. The HEK293T cells were seeded in a 12-well plate at a density of 250,000 cells per well for later use. An aliquot of 3 μL of EndoFectin Lenti Transfection Reagent was pipetted into an EP tube containing 50 μL of Opti-MEM, mixed well, and kept at room temperature for 10 min. Appropriate amounts of plasmids (PA-phw2000, PB1-phw2000, PB2-phw2000, NP-phw2000, pPHY luciferase plasmid, and Renilla plasmid) were transferred into an EP tube containing 50 μL of Opti-MEM, mixed well, and kept at room temperature for 10 min. The transfection reagent mixture in the EP tube was transferred into the EP tube containing the mixture of plasmids, mixed well, and kept at room temperature for 20 min. The mixed solution was transferred into the 293T cell culture plate and cultured in an incubator at 37 °C with 5% CO2. After a 6-h transfection, ZSP1273 (0.457–1000 nM), VX-787 (0.0001–1000 nM), and favipiravir (0.0456–100 μM) were added to the cell wells. After 24 h, the polymerase activity in the cells was measured by luciferase assay. Luciferase assay: First, we removed the supernatant of the cell liquid, washed the cell plate once with 1× PBS, added 1× LYSIS to lyse the cells, and transferred 20 μL of cell lysate to the 96-well plate. Finally, we added 100 μL of luciferase assay reagent to the mixture, mixed it well, and read the firefly luciferase (Fluc) values on a full-wavelength microplate reader. Then, we added 100 μL of Stop & Glo® reagent (Promega, Tokyo, Janpan, Cat#E1910)to the mixture, mixed it well, and read the Renilla luciferase (Rluc) values on a full-wavelength microplate reader. The IC50 values were calculated via the Reed–Muench method.
4.3. Human Kinase Activity Inhibition Assay
Kinase activity was measured by Z’-LYTE
® technology (Invitrogen) based on the principle of fluorescence resonance energy transfer (FRET). ZSP1273, VX-787, and staurosporine solution were diluted by an automated liquid handling platform (Bravo, Agilent G5409A). Aliquots of 2.5 μL of the diluted compound solutions were transferred to the assay plate and then centrifuged at 1000 rpm for 1 min. The compounds were diluted from 10,000 nM to 0.17 nM in the final reaction system. An aliquot containing a 5 μL kinase and peptide mixture in assay buffer (50 mM HEPES pH 7.5, 1 mM EGTA, 10 mM MgCl
2, 0.01% Brij-35) was added to the assay plate, and then the plate was incubated at 23 °C for 15 min. Subsequently, an aliquot of 2.5 μL of ATP solution was added to the assay plate and centrifuged at 1000 rpm for 1 min. CK1alpha and MAP4K4 were incubated for 90 min, TNIK for 120 min, and other kinases for 60 min. An aliquot of 5 μL of assay reagent was added to the assay plate and centrifuged at 1000 rpm for 1 min, and then the plate was incubated at 23 °C for 60 min before being read on an Envision multilabel plate reader. The IC
50 values were calculated using XLfit5 (formula 205) developed by IDBS. The assay reaction conditions of ZSP1273 against 24 kinases are shown in
Table 4.
4.4. Evaluation of G-Protein-Coupled Receptors’ Activity
The reference compounds are shown in
Table A3 and
Table A4. Twenty-two cell lines stably expressing the relevant receptors were constructed by WuXi AppTec (Shanghai, China) Co., Ltd. Specific information and culture conditions are listed in
Table A3 and
Table A4. The cells were seeded into 384-well polylysine-coated cell plates at a density of 20,000 cells per well (20 μL), and then they were incubated overnight at 37 °C in a 5% CO
2 incubator. The test and reference compounds were diluted with 100% DMSO, and gradient dilution compound plates were prepared with ECHO. The cell plates were then supplemented with 20 μL of 2× Fluo-4 Direct
TM buffer per well and incubated in a 5% CO
2 incubator at 37 °C for 50 min. After the cells were kept at room temperature for 10 min, 10 μL of experimental buffer salt solution was added to the cell plates to read the fluorescence signal. Then, 10 μL of a reference compound agonist was added to the plates to read the fluorescence signal, and the EC
80 of the corresponding GPCR target was calculated. To read the fluorescence signal according to the set program, 10 μL of the test compound and the reference compounds were added to the cell plates at detectable concentrations. In order to read the fluorescence signal, 10 μL of the reference compound agonist with a concentration of 6× EC
80 was added to the cell plates. The compound agonist assay data were exported by means of “Max–Min” and “Read 1 to 90” using the software. The compound antagonist assay data were exported by means of “Max–Min” and “Read 90 to Maximum allowed” using the software. The data were analyzed using Prism statistical software.
4.5. Cytopathic Effect (CPE) Inhibition Assay
In this study, the CPE method was used to evaluate the in vitro inhibitory effect of ZSP1273 on the replication of various influenza A virus strains (H1N1 and H3N2), oseltamivir-resistant strains, baloxavir-resistant virus strains, positive-strand RNA viruses (human rhinovirus (HRV) and human enterovirus 71 (EV71), negative-strand RNA viruses (respiratory syncytial virus (RSV) and human parainfluenza virus type 3 (HPIV-3), and a DNA virus (herpes simplex virus type 1 (HSV-1)), along with combination experiments of ZSP1273 with oseltamivir. MDCK cells were seeded in 96-well cell culture plates at a density of 15,000 cells per well and cultured at 37 °C with 5% CO2 overnight. The next day, serially diluted compounds (3-fold serial dilution, eight concentrations, in triplicate wells) and viruses were added, with ZSP1273, VX-787, and oseltamivir at concentration ranges of 1–0.0005 nM, 10–0.0046 nM, and 100–0.0457 µM, respectively. The final concentration of DMSO in the cell culture medium was 0.5%. The resulting cultures were incubated for an additional 2–5 days. Cell viability was detected by CellTiter-Glo or CCK-8 according to the manufacturer’s instructions. The cytotoxicity of the compounds was assessed in parallel under the same conditions, but without viral infection. MDCK cells were seeded in 96-well cell culture plates at a density of 15,000 cells per well and cultured at 37 °C and 5% CO2 overnight. Next day, serially diluted compounds (3-fold serial dilution, 8 concentrations, in triplicate wells) with the concentration ranges of ZSP1273, VX-787, and Oseltamivir of 100–0.0457 µM. The final concentration of DMSO in the cell culture medium was 0.5%. The resulting cultures were incubated for additional 2–5 days. Cell viability was detected by CellTiter-Glo or CCK-8 following the manufacturer’s manual. The antiviral activity and cytotoxicity of the compounds were expressed as % inhibition and % viability based on the protection against the virus-induced CPE, respectively. The raw CPE data indicate the values of the compound-treated wells; average VC, average CC, and average MC indicate the average values of the virus control, cell control (i.e., cells without viral infection or compound treatment), and medium control (i.e., medium only) wells, respectively. The EC50 and CC50 values were calculated using GraphPad Prism 6.0.
4.6. Evaluation of ZSP1273 against Highly Pathogenic Avian Influenza Viruses H7N9 and H5N6
MDCK cells were seeded in a 96-well plate for culture. The serum-free, DMEM-diluted viruses (10-1-10-10) were added to the 96-well plate (100 μL/well, repeated for 6 wells), and a blank control group was set up at the same time. After discarding the supernatant, the plate was incubated at 37 °C in a 5% CO2 incubator for 2 h and washed twice with 1× PBS. The basal medium DMEM was then added to continue the incubation for another 48 h. The cell growth was observed daily, and when the cells showed cellular atrophy, rounding, and exfoliation, the occurrence of CPE was recorded, and the TCID50 was calculated via the Reed–Muench method. The ZSP1273 was serially diluted in 5 gradients, with the high-dose concentration (0.5 ng/mL) as the initial concentration. Each group was inoculated with a highly pathogenic avian influenza virus solution (with a viral titer of 100 TCID50) at 100 μL/well. An equal amount of diluted virus solution was added to the normal group, and the supernatant was discarded after adsorption for 2 h. Corresponding dilutions of drug were added to the drug group, while the normal group and the virus group were supplemented with an equal amount of drug diluent for incubation for 48 h. Then, 20 μL of MTT solution (5 mg/mL, i.e., 0.5% MTT) was added, and the incubation was continued for another 4 h. Next, 150 μL of DMSO was added to each well. The absorbance of each well was measured at OD 490 nm on an ELISA instrument. The 50% inhibitory concentration (IC50) was calculated via the Reed–Muench method.
The in vitro cytotoxicity of the compounds was assessed in parallel under the same conditions, but without viral infection. After the MDCK cells formed a monolayer in the 96-well plate for culture and the plate was washed with PBS, WXFL20100273 at an initial concentration of 25 μg/mL was diluted 2-fold to set seven gradients, and then it was added to the wells at 100 μL/well (four duplicate wells); a blank group (with medium only, without cells) and a normal cell control group (with drug dissolution medium) were also set up simultaneously. The cells were incubated with 5% CO2 at 37 °C for 48 h, and then 20 μL of MTT solution was added (5 mg/mL, i.e., 0.5% MTT). The incubation lasted for another 4 h until termination. Then, 150 μL of DMSO was added to each well, and the plate was placed on a shaker for 10 min at low speed. The absorbance at 490 nm in each well was measured on a full-wavelength scanner, and the TC50 and TC0 of the drug were calculated. The selective index (SI) was calculated using the formula SI = TC50/IC50. The assay was repeated three times.
4.7. HCV Replicon Assay
The compounds were serially diluted using the ECHO555 Liquid Workstation System and added to 96-well plates. HCV GT-1b replicon cells were then seeded into a 96-well experimental plate containing the compounds at a density of 8000 cells per well with a final DMSO concentration of 0.5%. The cells were incubated in an incubator at 5% CO2 and 37 °C for 3 days. The cell viability was measured using the CellTiter-Fluor Cell Vitality Assay Kit to determine the cytotoxicity of the compounds. The luciferase activity in the HCV replicons was detected using Britelite plus—a luciferase luminescence substrate—and the data were used to determine the inhibitory activity of the compound against HCV replicons.
A nonlinear fitting analysis of compound inhibition and viability was performed using the GraphPad Prism (version 5) software to determine the EC50 and CC50 of the compounds.
4.8. Anti-Hepatitis-B-Virus Assay
The anti-HBV activity was detected in HepG2.2.15 cells, which are stable HBV-transfected cells that consistently express HBV and are commonly used to determine the anti-HBV activity of compounds. HepG2.2.15 cells were seeded into 96-well cell culture plates at a density of 40,000 cells per well, followed by the addition of diluted compounds (3× serial dilution, 8 concentration points, in triplicate). Entecavir (ETV) was used as a positive control. The final concentration of DMSO in the cell medium was 0.5%. The HepG2.2.15 cells were incubated at 37 °C with 5% CO2. The medium was replaced with fresh medium containing the same concentration of compound on the third day, and the supernatant was collected on the sixth day. The HBV DNA was extracted from the supernatant using the QIAamp 96 DNA Blood Kit and quantified by quantitative real-time polymerase chain reaction (qPCR). The quantified standard HBV plasmid DNA was diluted in a 3-fold series to 8 concentration points and subsequently added to the qPCR reaction system with the sample DNA (10 μL each) for PCR. A standard curve was plotted using the CT value of standard plasmid DNA to quantify the numbers of HBV DNA copies in the sample wells and control wells. The cytotoxicity assay was performed in parallel with the antiviral assay under the same conditions. The cell viability was detected using the CellTiter-Glo assay. A nonlinear fitting analysis of compound inhibition and viability was performed using GraphPad Prism (version 5) software to determine the EC50 and CC50 of the compounds.
4.9. hERG Potassium Channel
ZSP1273-mediated inhibition of the hERG potassium channel (human Ether-a-go-go-related gene potassium channel) was measured by the electrophysiological manual patch-clamp method. When testing the CHO (Chinese Hamster Ovary) cells with stable expression of the hERG potassium channel, the hERG potassium channel current was recorded at room temperature using the whole-cell patch-clamp technique. The clamping voltage and data were controlled and recorded using the pCLAMP 10 software with a sampling frequency of 10 kHz and a filtering frequency of 2 kHz. After the whole-cell recordings were obtained, the clamp voltage was at −80 mV, which triggered the step voltage of the hERG potassium current (hERG) from −80 mV (applied with a depolarization voltage for 2 s) to +20 mV, followed by depolarization to −50 mV for 1 s, and then down to −80 mV. This voltage stimulation was administered every 10 s, and the drug administration was initiated after the hERG potassium current was stabilized (for 1 min). The compound was continuously administered at the lowest concentration, and each concentration lasted for 1 min. At least 3 cells (n ≥ 3) were tested at each concentration. Briefly, ZSP1273 was serially diluted 3-fold for 6 concentrations (the concentration ranges were 0.16–40 µM). Cisapride was serially diluted 3-fold for 5 concentrations (the concentration ranges were 3.70–300 nM). The GraphPad Prism (version 8) software was used to determine the IC50 values of the compounds.
4.10. Animals
The female BALB/c mice (specific-pathogen-free (SPF) grade, 6–7 weeks old, 16–18 g) used in the murine infection experiments and pharmacokinetic studies were purchased from Shanghai Lingchang Biotech Co., Ltd. (Shanghai, China). The ferrets (Mustela Putorius Furo, female, 10–16 weeks old, fixed and de-scented), purchased from Wuxi Sangosho Biotechnology Co., Ltd., (Wuxi, China) had been confirmed as negative for influenza virus A/California/04/2009 serum antibodies by a micro-neutralization assay. The SD rats were supplied by Beijing Vital River Laboratory Animal Technology Co., Ltd., Beijing, China Male SD rats with certificate number 11400700256361 were received on 20 October 2017; female SD rats with certificate number 11400700255558 were received on 17 October 2017. The beagle dogs used in this study were supplied by Marshall Bioresources (Beijing, China). The animals were confirmed to be healthy by WuXi veterinarians before being assigned to the study. Each animal was given a unique identification number marked on the ear and written on the cage card. According to the IACUC, a mouse dying or losing more than 35% of its weight (based on the weight on the day of infection) would be considered dead (humanitarian endpoint). The laboratory animal quality certificate number was S(X)FXF 2014004. All animal care and experimental procedures were approved by the Institutional Animal Care and Treatment Committee of WuXi AppTec (approval numbers: R20160317-Mouse and N20170303).
4.11. Efficacy Experiments with ZSP1273 in the Murine Infection Model
4.11.1. Murine Infection Experiment I
The 60 mice were divided into 10 groups, with six mice in each group. Groups 1 and 2 were gavaged with the vehicle; Groups 3 and 4 were gavaged with oseltamivir (10 mg/kg); Groups 5–8 were gavaged with ZSP1273 (3 mg/kg, 10 mg/kg, 10 mg/kg, and 30 mg/kg); and Groups 9 and 10 were gavaged with VX-787 (10 mg/kg). The mice in Groups 1, 3, 6, and 9 (euthanatized on day 3) were gavaged twice daily on days 1–2, while those in Groups 2, 4, 5, 7, 8, and 10 (euthanatized on day 5) were gavaged twice daily on days 1–4; the administration interval was 10 h/14 h. The first dose was administered at 36 h after infection with influenza A virus WSN/33 (H1N1) (inoculation size of 1.0 × 10
4 PFU/mouse). On day 3 or day 5—the two endpoints of the in vivo study—all of the mice were euthanatized, while their lung tissues were collected and quickly frozen in DPBS at 10 times the lung volume for the viral plaque assay [
27]. From day 0 to day 5, the weight of the mice was monitored daily.
4.11.2. Murine Infection Experiment II
The 104 mice were divided into 13 groups, with 8 mice in each group. Group 1 was gavaged with the vehicle, Groups 2–5 were gavaged with oseltamivir (10 mg/kg), Groups 6–9 were gavaged with ZSP1273 (10 mg/kg), and Groups 10–13 were gavaged with VX-787 (10 mg/kg). The mice in Groups 1, 2, 6, and 10 were gavaged twice daily from day 0 to day 6, with the first dose given at 4 h pre-infection; the mice in Groups 3, 7, and 11 were gavaged twice daily from day 2 to day 8, with the first dose given at 48 h after infection; the mice in Groups 4, 8, and 12 were gavaged twice daily from day 3 to day 9, with the first dose at 72 h after influenza A virus WSN/33 (H1N1) infection (inoculation size of 1.0 × 104 PFU/mouse), while those in Groups 5, 9 and 13 were gavaged twice daily from day 4 to day 10, with the first dose at 96 h after infection. The administration interval was 10 h/14 h. From day 0 to day 14, the weight and viability of the mice were monitored daily. Day 14 was the endpoint of the study, at which point all of the living mice were euthanatized after being weighed.
4.11.3. Murine Infection Experiment III
The 64 mice were divided into 8 groups, with 8 mice in each group. Group 1 was gavaged with the vehicle; Groups 2 and 3 were gavaged with oseltamivir (30 mg/kg and 100 mg/kg); Groups 4 and 5 were gavaged with ZSP1273 (30 mg/kg and 100 mg/kg); Groups 6 and 7 were gavaged with VX-787 (30 mg/kg and 100 mg/kg); and Group 8 was gavaged with Favipiravir (100 mg/kg). From day 2 to day 8, all of the animals were orally gavaged twice daily. The first dose was administered 48 h after influenza A virus WSN/33 (H1N1) infection; the administration interval was 10 h/14 h. From day 0 to day 14, the weight and viability of the mice were monitored daily. Day 14 was the endpoint of the study, at which point all of the living mice were euthanatized after being weighed.
4.11.4. Murine Infection Experiment IV
BALB/c mice were intranasally infected with the 2LD50 (lethal dose) influenza virus. The 90 mice were divided into 9 groups, with 10 mice in each group. The drug groups (ZSP1273 30 mg/kg, ZSP1273 10 mg/kg, ZSP1273 3 mg/kg, VX-787 30 mg/kg, baloxavir 30 mg/kg, oseltamivir 30 mg/kg, and ZSP1273 3 mg/kg + oseltamivir 30 mg/kg combined administration group), blank control group, and virus control group were set. From day 3 to day 7, all of the animals were orally gavaged twice daily. The first dose was administered 72 h after A/PR/8/34 (H1N1) infection (inoculation size of 2.0 × 105 PFU/mouse); the administration interval was 10 h/14 h. From day 0 to day 16, the weight and viability of the mice were monitored daily. Day 14 was the endpoint of the study, at which point all of the living mice were euthanatized after being weighed.
4.11.5. Murine Infection Experiment V
BALB/c mice were intranasally infected with the LD50 (non-lethal dose) influenza virus. The 90 mice were divided into 9 groups, with 10 mice in each group. The drug groups (ZSP1273 30 mg/kg, ZSP1273 10 mg/kg, ZSP1273 3 mg/kg, VX-787 30 mg/kg, baloxavir 30 mg/kg, oseltamivir 30 mg/kg, and ZSP1273 3 mg/kg + oseltamivir 30 mg/kg combined administration group), blank control group, and virus control group were set. From day 3 to day 7, all of the animals were orally gavaged twice daily. The first dose was administered 72 h after A/PR/8/34 (H1N1) infection (inoculation size of 1.0 × 105 PFU/mouse); the administration interval was 10 h/14 h. From day 0 to day 8, the weight and viability of the mice were monitored daily. Day 8 was the endpoint of the study, at which point all of the living mice were euthanatized after being weighed, and the lung tissue of the mice was aseptically harvested and weighed. The lung index of the mice was calculated, and the viral titers of the lung tissue were measured.
4.12. Antiviral Activity of ZSP1273 in the Ferret Infection Model
The 19 ferrets were divided into 4 groups: the vehicle group (n = 5), the oseltamivir group (25 mg/kg/day, n = 4), the VX-787 group (25 mg/kg/day, n = 5), and the ZSP1273 group (25 mg/kg/day, n = 5). The vehicle group was gavaged twice daily with 5 mL/kg of 10% Kolliphor® HS15 solution, and the other groups were gavaged twice daily with 25 mg/kg/day of the corresponding drugs. The interval between the two doses was never less than 6 h or more than 12 h, with the first dose administered 4 h before influenza A virus/California/07/2009 (H1N1) infection (inoculation size of 1.0 × 105 PFU/ferret). The administration was performed for five consecutive days. The weights of the animals were measured and recorded before infection. After the animals were anesthetized by intraperitoneal injection of pentobarbital sodium (40 mg/kg), a 1.0 × 105 TCID50 (200 μL) virus solution was dropped into their nostrils. Nasal lavage: After the body weights were recorded on days 2, 4, and 6, the animals were anesthetized by intraperitoneal injection of pentobarbital sodium (40 mg/kg). In the safety cabinet, the animal lay in a lateral position, and 1 mL of sterile PBS (containing 400 U of penicillin, 400 μg/mL of streptomycin, and 5 μg/mL of amphotericin B) was dropped into one nostril. The lavage liquids were dropped onto a 100-mm plate and collected into a centrifuge tube, followed by storage on ice. Then, the viral titer of the lavage fluid was determined. The weight and viability of the ferrets were monitored daily. These observations were continued for 3 days until no symptoms were observed in the vehicle group. The weight of the ferrets in the vehicle group returned to pre-infection levels and remained stable for more than 3 days after day 12, so day 15 was the endpoint of the study. During the experiment, 1 ferret (No. 10) in the oseltamivir group died on day 2, without any abnormalities being found in the autopsy. The death of this animal was defined as a nonspecific death from unknown causes, with all associated data excluded from the statistics.
4.13. Pharmacokinetic Study of Single- and Multi-Dose ZSP1273 Given by Oral or Intravenous Administration in Rats, Beagle Dogs, and Mice
A sensitive, specific, and reproducible LC–MS/MS method for the quantitative determination of ZSP1273 in the plasma of SD rats, beagle dogs, and female BALB/c mice was developed and validated. The dynamic range of the method was 2.00–5000 ng/mL (female BALB/c mice) and 5.00–10,000 ng/mL (SD rats and beagle dogs).
Thirty (30; 15/sex) SD rats were divided into five groups, with three animals/sex/group. Animals in Group 1 were given ZSP1273 by a single intravenous bolus administration at 3 mg/kg. The vehicle used for the IV study was DMSO:Solutol:water (5:5:90, v/v/v). Animals in Groups 2–4 were given ZSP1273 by a single oral administration at 3, 15, and 75 mg/kg, respectively. Animals in Group 5 were given ZSP1273 by oral administration twice daily at 15 mg/kg for 7 consecutive days. The vehicle used for the oral studies was 20% (v/v) Solutol in water, with a dose volume of 10 mL/kg. Plasma samples were collected at pre-dose (0), and at 0.083, 0.25, 0.5, 1, 2, 4, 6, 8, 12, and 24 h post-dose for Groups 1–4. For Group 5, plasma was collected at pre-dose (0) and at 0.083, 0.25, 0.5, 1, 2, 4, 8 (before the second dose), 8.25, 9, 12, 16, and 24 h post-dose on days 1 and 7. The concentrations of ZSP1273 in the plasma samples were determined by a validated liquid chromatography–tandem mass spectrometry (LC–MS/MS) method.
Thirty (30; 15/sex) naïve beagle dogs were divided into five groups, with three animals/sex/group. Animals in Group 1 were given ZSP1273 by a single intravenous bolus administration at 1 mg/kg. Animals in Groups 2–4 were given ZSP1273 by a single oral administration at 1, 5, and 15 mg/kg, respectively. Animals in Group 5 were given ZSP1273 by oral administration twice daily (the dosing interval was 8 h) at 5 mg/kg for 7 consecutive days. Plasma samples were collected at pre-dose (0) and at 0.083, 0.25, 0.5, 1, 2, 4, 6, 8, 12, and 24 h post-dose for Groups 1–4. For Group 5, plasma was collected at pre-dose (0) and at 0.083, 0.25, 0.5, 1, 2, 4, 8 (before the second dose), 8.25, 9, 12, 16, and 24 h post-dose on days 1 and 7. The concentrations of ZSP1273 in the plasma were determined by the liquid chromatography–tandem mass spectrometry (LC–MS/MS) method.
Twenty-seven (27) female BALB/c mice were divided into three groups, with nine animals per group. Animals in Groups 1–3 were given ZSP1273 by oral administration at 3, 10, and 30 mg/kg, respectively, for 7 consecutive days, twice daily. Plasma samples were collected at pre-dose (0) and at 0.25, 1, 4, 7, 10 (before the second dose), 10.25, 11, and 14 h post-dose on day 7. The weight of the mice was monitored daily. The concentrations of ZSP1273 in the plasma were determined by the liquid chromatography–tandem mass spectrometry (LC–MS/MS) method.