Molecular and Morphological Phylogenies of Spirorbinae (Serpulidae, Polychaeta, Annelida) and the Evolution of Brooding Modes
Abstract
:1. Introduction
2. Materials and Methods
2.1. Taxon Sampling
2.2. Collection and Preservation
2.3. DNA Extraction, Amplification, and Sequencing
2.4. Morphological Data
2.5. Phylogenetic Analyses
2.5.1. Molecular and Molecular + Morphology Analyses
2.5.2. Transformations
3. Results
3.1. Morphology Data Analysis
3.2. Molecular-Only and Combined DNA + Morphology Data Analyses
3.3. Transformations
4. Discussion
4.1. Phylogeny of the Spirorbinae
4.2. Evolution of Brooding Modes
4.3. Future Studies
Supplementary Materials
Author Contributions
Funding
Institutional Review Board Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
Appendix A
- (1)
- Tube coiling: 0. absent; 1. flat spiral; 2. flat spiral posteriorly, uncoiled anteriorly;
- (2)
- Coiling direction: 0. dextral; 1. sinistral; 2. both;
- (3)
- Calcareous tube type: 0. opaque; 1. porcellanous: 2. vitreous;
- (4)
- Longitudinal ridges: 0. absent; 1. present;
- (5)
- Growth rings: 0. absent; 1. present;
- (6)
- Peripheral flange: 0. absent; 1. present;
- (7)
- Crystalline patch: 0. absent; 1. present;
- (8)
- Form of crystalline patch: 2. paired; 3. single; 4. diffuse;
- (9)
- Sexuality pattern: 0. simultaneous hermaphrodite; 1. gonochoric or sequential hermaphrodites;
- (10)
- Sperm head: 0. spherical; 1. elongate;
- (11)
- Larval feeding: 0. lecithotrophic; 1. planktotrophic;
- (12)
- Embryo/larvae incubation: 0. absent; 1. present;
- (13)
- Location of embryo/larvae incubation: 0. tube; 1. operculum. 2. on tube;
- (14)
- Tube incubation: 0. loose in tube; 1. unattached string; 2. gelatinous matrix; 3. posterior filament; 4. thoracic stalk;
- (15)
- Opercular brood chamber; 0. distal cuticular plate; 1. epithelial cup; 2. paired plates;
- (16)
- Dorsal convex collar flap: 0. absent; 1. present;
- (17)
- Number of radioles: 0. <10; 1. >10;
- (18)
- Larval attachment gland: 0. absent; 1. single; 2. paired;
- (19)
- Position of larval attachment gland: 0. anterior; 1. posterior;
- (20)
- Operculum: 0. absent; 1. present;
- (21)
- Opercular calcification: 0. absent; 1. present;
- (22)
- Opercular peduncle: 0. smooth; 1. with pinnules;
- (23)
- Opercular plate: 0. absent; 1. present;
- (24)
- Distal opercular plate calcified: 0. absent; 1. present;
- (25)
- Orientation of opercular plate relative to tube mouth: 0. perpendicular; 1. oblique;
- (26)
- Opercular plate spines: 0. absent; 1. present;
- (27)
- Secondary opercular plate below embryos: 0. absent: 1. present;
- (28)
- Primary operculum becomes brood chamber: 0. absent; 1. present;
- (29)
- Opercular plates retained after molting: 0. absent; 1. present;
- (30)
- Brood chamber-talon fusion: 0. absent: 1. present;
- (31)
- Primary opercular plate rim: 0. absent; 1. present;
- (32)
- Secondary opercular plate rim: 0. absent; 1. present;
- (33)
- Fiber connecting talon and tori: 0. absent; 1. present;
- (34)
- Primary talon: 0. absent; 1. present;
- (35)
- Secondary talon: 0. absent; 1. present;
- (36)
- Primary talon type: 0. spatulate; 1. vestigial; 2. tooth;
- (37)
- Terminal talon bifurcation: 0. absent; 1. present;
- (38)
- Talon projection: 0. absent; 1. present;
- (39)
- Primary talon location: 0. eccentric; 1. peripheral;
- (40)
- Primary talon external: 0. absent; 1. present;
- (41)
- Collar margin fused: 0. absent; 1. present;
- (42)
- Number of segments; concave side: 0. three; 1. four; 2. five; 3. >five;
- (43)
- Number of thoracic tori, concave side: 0. two; 1. three; 2. four; 3. >five;
- (44)
- Number of segments, convex side: 0. Three; 1. four; 2. five; 3. >five;
- (45)
- Number of thoracic tori, convex side: 0. two; 1. three; 2. >five;
- (46)
- Thoracic tori symmetry: 0. symmetric; 1. asymmetric;
- (47)
- Collar chaetae type: 0. fin-and-blade; 1. capillary and limbate;
- (48)
- Collar chaetae distribution: 0. symmetric; 1. more on convex; 2. more on concave;
- (49)
- Same collar chaetae form convex and concave side: 0. present; 1. absent;
- (50)
- Capillary collar chaetae: 0. absent; 1. present;
- (51)
- Capillary collar chaetae distribution: 1. both sides; 2. convex only;
- (52)
- Gap between fin and blade: 0. absent; 1. present;
- (53)
- Collar chaetae blade teeth: 0. fine; 1. coarse;
- (54)
- Form of collar chaetae fin teeth: 0. fine; 1. coarse;
- (55)
- Collar chaetae cross-striations: 0. absent; 1. present;
- (56)
- Collar chaetae cross striation distribution: 0. present both sides; 1. absent concave side;
- (57)
- Capillary chaetae in second thoracic fascicle: 0. absent; 1. present;
- (58)
- Capillary chaetae in third thoracic fascicle: 0. absent; 1. present;
- (59)
- Sickle (Apomatus) chaetae in third thoracic fascicles: 0. absent; 1. present;
- (60)
- Shape of sickle (Apomatus) chaetae: 0. parallel-sided; 1. pennant-shaped;
- (61)
- Thoracic uncini distribution: 0. more on concave; 1. more on convex; 2. same number on both;
- (62)
- Multiple rows of thoracic uncinal teeth (rasp-shaped): 0. absent; 1. present;
- (63)
- Transverse uncini rows: 0. straight;1. diagonal;
- (64)
- Thoracic uncini peg: 0. blunt; 1. pointed;
- (65)
- Thoracic uncinal peg lateral teeth: 0. absent; 1. present;
- (66)
- Chaetiger with smallest number of thoracic uncini: 0. last thoracic chaetiger; 1. 2nd convex; 2. 3rd convex: 3. first thoracic chaetiger;
- (67)
- Number of abdominal chaetigers: 0. 0–10; 1. 11–20; 2. 21–30; 3. 30+;
- (68)
- Abdominal uncini on convex side: 0. absent; 1. present;
- (69)
- Location of largest abdominal tori: 0. anterior; 1. posterior; 2. even distribution; 3. middle;
- (70)
- Abdominal uncini symmetry: 0. symmetric; 1. asymmetric;
- (71)
- Abdominal uncinal tooth transverse rows: 0. straight; 1. diagonal;
- (72)
- Multiple abdominal uncini tooth rows: 0. absent; 1. present;
- (73)
- Number of multiple abdominal uncini rows: 0. <ten; 1. >ten;
- (74)
- Abdominal uncinal peg: 0. flat; 1. gouge-shaped: 2. pointed;
- (75)
- Flat geniculate abdominal chaetae type: 0. pennant-shaped; 1. parallel-sided; 2. brush-like;
- (76)
- Paired abdominal chaetae: 0. absent; 1. present;
- (77)
- Distribution of abdominal chaetae: 0. entire abdomen; 1. posterior; 2. anterior;
- (78)
- Capillary abdominal chaetae: 0. absent; 1. present;
- (79)
- Capillary abdominal chaetae left/right distribution: 0. concave; 1. both sides;
- (80)
- Abdominal chaetal teeth: 0. fine; 1. coarse;
- (81)
- First abdominal chaetal tooth size: 0. same as other teeth; 1. first two small; 2. larger than other teeth; 3. first tooth small;
- (82)
- Abdominal chaetae heel projection: 0. absent; 1. present;
- (83)
- Size of abdominal chaetae vs. collar chaetae: 0. same; 1. larger; 2. Smaller.
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Taxa | Source | Voucher Number | 18S | 28S |
---|---|---|---|---|
Filograninae outgroup | ||||
Chitinopoma serrula | Norway | E3524 | DQ317112 | EU195350 |
Pomatostegus actinoceras | Mexico | W.42378 | OQ379437 | OQ389670 |
Protula bispiralis | Japan | E3657 | OQ379439 | OQ389672 |
Salmacina sp. | Edithburgh, SA, Australia | E3499 | DQ317126 | EU256545 |
Spirorbinae | ||||
Neomicrorbis cf. azoricus | Cocos (Keeling) Isl. Australia | W.54342 | PP002544 | PP002543 |
Pileolariini | ||||
Amplicaria spiculosa | Whyalla, SA, Australia | E3490 | DQ242560 | DQ242579 |
Bushiella abnormis | Barkley Sound, BC, Canada | E3488 | DQ242563 | DQ242598 |
Jugaria cf. quadrangularis | Barkley Sound, BC, Canada | E3479 | DQ242564 | DQ242599 |
Pileolaria cf. marginata | Barkley Sound, BC, Canada | E3478 | DQ242565 | DQ242594 |
Pileolaria cf. militaris | Pt. Cartwright, QLD, Australia | E3492 | DQ242567 | DQ242593 |
Pileolaria sp. 1 (orange eggs) | Whyalla, SA, Australia | E3493 | DQ242562 | DQ242596 |
Pileolaria sp. 3 (gold eggs) | Rapid Bay, SA, Australia | E3494 | DQ242568 | DQ242597 |
Simplaria cf. potswaldi | Barkley Sound, Canada | E3504 | DQ242566 | DQ242595 |
Vinearia cf. koehleri | Pt. Cartwright, QLD, Australia | E3475 | DQ242561 | DQ242592 |
Januini | ||||
Janua heterostropha | Sangerdi, Iceland | E3506 | DQ242548 | DQ242585 |
Neodexiospira cf. brasiliensis | Barkley Sound, BC, Canada | E3498 | DQ242550 | DQ242586 |
Neodexiospira cf. nipponica | Barkley Sound, BC, Canada | E3486 | DQ242549 | DQ242587 |
Neodexiospira cf. steueri | Encounter Bay, SA, Australia | E3523 | DQ242551 | DQ242588 |
Paralaeospirini | ||||
Paralaeospira sp. | Encounter Bay, SA, Australia | E3485 | DQ242555 | DQ242580 |
Eulaeospira convexis | North Bondi, NSW, Australia | E3496 | DQ242552 | DQ242582 |
Eulaeospira cf. orientalis | Encounter Bay, SA, Australia | E3495 | DQ242553 | DQ242581 |
Romanchellini | ||||
Helicosiphon biscoensis | Antarctica | BIC A4000 | OQ379432 | OQ392408 |
Protolaeospira cf. eximia | Barkley Sound, BC, Canada | E3482 | DQ242556 | DQ242584 |
Protolaeospira cf. tricostalis | Bondi, NSW, Australia | E3487 | DQ242557 | DQ242606 |
Protolaeospira cf. capensis | Bondi, NSW, Australia | E3484 | DQ242558 | DQ242607 |
Romanchella quadricostalis | Kangaroo Isl., SA, Australia | E3491 | DQ242559 | DQ242608 |
Metalaeospira tenuis | Port Lincoln, SA, Australia | E3480 | DQ242554 | DQ242583 |
Circeini | ||||
Circeis cf. armoricana | Barkley Sound, BC, Canada | E3476 | DQ242545 | DQ242589 |
Circeis spirillum | Stykkishlómør, Iceland | E3507 | DQ242546 | DQ242590 |
Paradexiospira cf. vitrea | Barkley Sound, BC, Canada | E3483 | DQ242547 | DQ242591 |
Spirorbini | ||||
Spirorbis cf. bifurcatus | Barkley Sound, BC, Canada | E3489 | DQ242569 | DQ242600 |
Spirorbis cf. marioni | PJs Pets, Edmonton, Canada | E3481 | DQ242570 | DQ242605 |
Spirorbis corallinae | Finnøy, Norway | E3497 | DQ242572 | DQ242603 |
Spirorbis rupestris | Finnøy, Norway | E3500 | DQ242571 | DQ242601 |
Spirorbis spirorbis | Sangerdi, Iceland | E3357 | AY577887 | DQ242604 |
Spirorbis cf. tridentatus | Finnøy, Norway | E3477 | DQ242573 | DQ242602 |
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Rouse, G.W.; Macdonald, T.A.; Kupriyanova, E.K. Molecular and Morphological Phylogenies of Spirorbinae (Serpulidae, Polychaeta, Annelida) and the Evolution of Brooding Modes. Diversity 2024, 16, 237. https://doi.org/10.3390/d16040237
Rouse GW, Macdonald TA, Kupriyanova EK. Molecular and Morphological Phylogenies of Spirorbinae (Serpulidae, Polychaeta, Annelida) and the Evolution of Brooding Modes. Diversity. 2024; 16(4):237. https://doi.org/10.3390/d16040237
Chicago/Turabian StyleRouse, Greg W., Tara A. Macdonald, and Elena K. Kupriyanova. 2024. "Molecular and Morphological Phylogenies of Spirorbinae (Serpulidae, Polychaeta, Annelida) and the Evolution of Brooding Modes" Diversity 16, no. 4: 237. https://doi.org/10.3390/d16040237
APA StyleRouse, G. W., Macdonald, T. A., & Kupriyanova, E. K. (2024). Molecular and Morphological Phylogenies of Spirorbinae (Serpulidae, Polychaeta, Annelida) and the Evolution of Brooding Modes. Diversity, 16(4), 237. https://doi.org/10.3390/d16040237