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Article

Diversity of Volatile Compounds in the Inula candida / I. verbascifolia Group (Asteraceae-Inuleae) and Its Impact on Species Delimitation

by
Aikaterini Koutsaviti
1,
Maria Eleftheria Zografaki
1,
Nikolaos M. Fyllas
2,
Olga Tzakou
1,* and
Theophanis Constantinidis
3,*
1
Section of Pharmacognosy and Chemistry of Natural Products, Department of Pharmacy, School of Health Sciences, National and Kapodistrian University of Athens, Panepistimiopolis Zografou, 15771 Athens, Greece
2
Biodiversity Conservation Laboratory, Department of Environment, University of the Aegean, 81100 Mytilene, Greece
3
Section of Εcology & Systematics, Department of Biology, National and Kapodistrian University of Athens, Panepistimiopolis Zografou, 15784 Athens, Greece
*
Authors to whom correspondence should be addressed.
Diversity 2022, 14(12), 1140; https://doi.org/10.3390/d14121140
Submission received: 12 November 2022 / Revised: 13 December 2022 / Accepted: 15 December 2022 / Published: 19 December 2022
(This article belongs to the Special Issue Chemistry and Biology of Medicinal and Aromatic Plants)

Abstract

:
The members of the Inula candida / I. verbascifolia group are perennial and chasmophytic plants attributed to four species and eleven entities at subspecific or varietal level. They are mostly confined to Greece. Volatile compounds of above-ground flowering parts of twenty-three populations covering ten taxonomic entities were obtained after hydrodistillation and analyzed by gas chromatography and mass spectrometry (GC-MS). In most cases, the total percentage of identified constituents reached 89% or above. Seventy-two components were identified. Oxygenated sesquiterpenes prevailed in the I. candida subgroup (47.3–71.5%), with epi-α-cadinol present in all members (13.4–42.7%) but rarely found in the I. verbascifolia subgroup. Considerable amounts of the hydrocarbon aldehydes decanal, undecanal and particularly tridecanal (0.5–35.0%, rarely absent) were predominately found in the I. verbascifolia members but were mostly absent in the I. candida subgroup. Isoalantolactone (12.4–49.5%), identified only in I. subfloccosa, and γ-(Z)-curcumen-12-ol, found only in I. candida subsp. limonella (22.6–42.1%), may serve as chemotaxonomic markers. Two different chemotypes can be distinguished within I. verbascifolia subsp. aschersoniana: a trans-muurola-4(14),5-diene-, γ-cadinene-rich chemotype from north-eastern Greece and a 1-epi-cubenol-, tridecanal-rich chemotype from central Greece. Different statistical algorithms were used to interpret the chemical diversity and identify the most appropriate number of clusters for the taxa. Cluster analyses indicated that the optimum number of clusters that best explain the metabolomic variability of the taxa is two. The degree of membership for each population based on the fuzzy k-means algorithm supported the I. verbascifolia subsp. aschersoniana samples within the I. candida subgroup, whereas I. subfloccosa may belong to any of the two clusters formed, although it also appears to have some unique characteristics.

1. Introduction

Inula L., together with Blumea DC., form the largest genera within Asteraceae tribe Inuleae, each comprising about 100 species [1,2]. In its traditional circumscription, Inula is not monophyletic; several related genera interfere with Inula in molecular phylogenetic trees, thus making Ιnula paraphyletic [3]. To resolve this situation, a rearrangement of the genus Pentanema was recently proposed [4], to comprise several species previously ascribed to Ιnula.
Within traditional Inula, an assemblage of clump-forming, woody-based species characterized by the presence of a whitish-tomentose indumentum covering leaves and stems and a predominantly chasmophytic habitat constitute the Inula candida / I. verbascifolia group, distributed in southern Italy, parts of the Balkan Peninsula, Anatolia and Lebanon [5]. In most floristic works, this group comprises four or five independent but very variable species [6,7]. I. verbascifolia (Willd.) Hausskn. has the broadest distribution, with population records ranging from south-east Italy to parts of the Balkan Peninsula, western Anatolia and Lebanon [5]. Five subspecific entities are recognized within this species [6]: I. verbascifolia subsp. aschersoniana (Janka) Tutin, I. verbascifolia subsp. heterolepis (Boiss.) Tutin, I. verbascifolia subsp. methanaea (Hausskn.) Tutin, I. verbascifolia subsp. parnassica (Boiss. & Heldr.) Tutin and I. verbascifolia subsp. verbascifolia. Some authors, however, prefer to consider these taxa as independent species [7,8]. The second species, I. candida (L.) Cass., is equally variable but with a narrower distribution [5]. It includes four infraspecific entities mostly accepted at subspecies (one at variety) level: I. candida subsp. candida, I. candida subsp. decalvans (Halácsy) Tutin, I. candida subsp. limonella (Heldr.) Rech. f. and I. candida var. rotundifolia Halácsy [6,8,9]. The whole last subgroup is endemic to Greece [5,6]. Similar to I. verbascifolia, the infraspecific taxa of I. candida have occasionally been erected to species level [8]. The third species of the group, I. subfloccosa Rech. f., is a very localised plant known from the southern parts of Evvia Island (Greece) [6]. It resembles I. verbascifolia but has floccose and glandular leaves [6]. The remaining two members of the group are I. anatolica Boiss. and I. fragilis Boiss., both endemic to Anatolia (Turkey) [5,7,8]. Older literature [10] included the last two species to the I. candida / I. verbascifolia group, but recent approaches exclude I. anatolica from the group [8] because of its smaller size, less tomentose leaves and lanceolate outer phyllaries.
When the taxonomic diversity of the group is linked with distribution ranges, it becomes obvious that Greece hosts the highest number of taxa (10) followed by Turkey (3 or 4). The Greek populations are present in almost all the phytogeographical regions of the country and cover a broad elevation range, from sea level to ca. 1900 m a.s.l. or higher. Still, for reasons difficult to justify, the group is absent from the islands of the central Aegean, thus forming the ‘’Kykladenfenster’’ [11]. Some rare taxa are very localised, confined to a small portion of an island or a couple of mountains only (e.g., I. subfloccosa and I. candida subsp. decalvans, respectively).
Recent authors have stressed the need for a thorough modern revision of the group [12]. The morphological diversity in the group is not yet fully understood and sometimes I. candida is difficult to distinguish from I. verbascifolia. I. subfloccosa has been considered of uncertain status, perhaps related to the subgroup of I. verbascifolia [12]. A recent molecular approach transferred two members of the latter subgroup to Pentanema, as Pentanema verbascifolium (Willd.) D. Gut. Larr et al. and P. aschersonianum (Janka) D. Gut. Larr. et al. [4]. However, incongruencies were observed between the ITS nrDNA and the concatenated plastid markers phylogenies. The plastid tree, in particular, allocated the obviously related I. verbascifolia and I. aschersoniana (I. verbascifolia subsp. aschersoniana) into different clades.
Inula is a genus containing bioactive compounds [13]. Inula helenium L., commonly known as elecampane, has been used in traditional medicine for centuries. Several Inula constituents exhibit anti-tumor/cytotoxic activity, antibacterial/antifungal actions, and have antidiabetic properties, among others [14]. Proper identification of the species is essential in reviewing biological activities and the knowledge of taxonomic relatives may be beneficial in the pharmacological evaluation of various Inula members.
This contribution is an attempt to use metabolomics as an aid to assess species delimitation and evaluate taxonomic relationships within the I. candica/I. verbascifolia group. Volatile compounds have been used successfully in elucidating relationships in various Asteraceae genera, as, for example, Achillea [15], Aldama [16], Anthemis [17], Helichrysum [18], Senecio [19], and Solidago [20]. They may offer useful chemotaxonomic markers and insights into common biosynthetic ways, presumably a consequence of genetic proximity. To this target, the goals of this study can be summarized as follows: (a) to collect and analyze volatiles in most members of the I. candica/I. verbascifolia group and, if possible, to investigate more than one population per taxonomic entity; (b) to identify and evaluate the chemical diversity present in volatile compounds obtained under the same experimental conditions; and (c) to use metabolomics as variables in cluster analyses in order to assess species identities and discuss taxonomic implications.
In this work we consider all members of the group as belonging to Ιnula. For most taxa, no nomenclatural combinations under Pentanema exist.

2. Materials and Methods

2.1. Plant Material

The plants of the I. candica / I. verbascifolia group are perennial herbs, with several stems emerging from a suffruticose base. Most populations flower from middle spring to middle summer or later, depending on the altitude and the exposure. Our investigation covered 10 taxa of the group and 23 populations, from various localities. The accepted taxonomic classification, scientific names and detailed information for each studied population are presented in Table 1. The collection altimeter readings of our samples ranged from 20 to 1750 m a.s.l. Voucher material from each population was identified according to relevant literature [6,7,21], dried in a plant press and deposited in the ATHU Herbarium of National and Kapodistrian University of Athens. All the material used for the analytical procedures was collected when in flower. Two to three healthy stems with leaves and inflorescences were selected per plant and cut off from their base (aerial stems). Approximately 5–8 plants were sampled per population. The collected stems were combined to create a pooled sample and left to dry in a shady, well-ventilated place for several days.

2.2. Collection of Volatile Compounds

Dried aerial parts from each population were cut into small pieces and subjected to hydrodistillation for 3 h using a modified Clevenger-type apparatus with a water-cooled receiver to reduce overheating artifacts. The isolated essential oils were taken up in pentane, dried over anhydrous sodium sulfate and stored at 4 °C until analyzed.

2.3. Chemical Analysis of Essential Oils

Gas chromatography (GC) analysis for the quantitative determination of components was carried out on an SRI 8610C gas chromatograph equipped with a HP-5MS fused silica capillary column (30 m × 0.25 mm; film thickness 0.25 μm), a split/splitless injector and a FID detector. For the identification of components, GC-mass spectrometry (GC-MS) analysis was carried out using a Hewlett-Packard 6890 gas chromatograph equipped with a HP-5MS fused silica capillary column (30 m × 0.25 mm; film thickness 0.25 μm), a split/splitless injector and a Hewlett- Packard 5973 MS detector operating in electron ionization mode at 70 eV. In both cases, the GC analysis parameters were the following: injection was performed at 200 °C in a split ratio 1:10, while detection was performed at 250 °C; the carrier gas was He at a flow rate of 2 mL/min; the oven temperature was 60 °C at the time of the injection, raised to 300 °C at a rate of 3 °C /min and subsequently held at 300 °C for 10 min.
The identification of the chemical constituents was based on comparison of their relative retention times and mass spectra with those obtained from authentic standards (Sigma Chemical Co., St. Louis, MO, USA, PhytoLab GmbH and Co., Vestenbergsgreuth, Germany) and/or reported in the NIST/NBS and Wiley libraries and the literature [22]. The relative amounts of volatile compounds of the essential oils were calculated with the peak area normalization method.

2.4. Statistical Analyses

The concentration of each chemical component in samples from the 23 studied populations was organized in a taxon × chemical component table. This table was analyzed using different clustering algorithms to identify the optimum and most meaningful number of clusters that could be delimited. We initially used the Ward’s hierarchical agglomerative [23] and the “k-means” [24] clustering methods. In addition, because of the high dimensionality of our taxon × chemical component matrix, we applied the k-means clustering algorithm on the coordinates of the first axes of a principal components analysis that accounted for 70.0% of the total volatile compounds variance (“kmeans-PCA”). The same method was applied on the pre-transformed taxon × chemical component matrix using the Hellinger transformation (“kmeans-PCA (Hellinger)”), in order to deal with the fact that many chemical components were not systematically identified across all samples, or their concentrations were very low (traces) and were thus included in the matrix with a value of zero. Finally, we used the “fuzzy k-means” clustering algorithm [25], a soft clustering method, where each object (population, in our case) could belong to multiple clusters with a different likelihood.
For each of the above algorithms, we evaluated the goodness of the clustering structure using three internal validation metrics. Internal clustering validation metrics quantify the effectiveness of a clustering algorithm by evaluating the ratio of “cluster separation” to “cluster compactness” [26]. The silhouette index (SI) is based on the pairwise differences of between- and within-cluster distance, with higher values used to identify the optimum number of clusters. The Dunn index (DI) estimates the ratio of the minimum pairwise distance between objects in different clusters to the maximum distance among clusters. Higher DI indicate a better performance of the clustering algorithm [27]. The Calinski–Harabasz index (CHI) is based on the average between and within cluster sum of squares, with higher values suggesting a better classification.
Instead of following the above procedure in a purely arithmetic way (i.e., sequentially increasing the number of clusters, estimating the validation metrics and then selecting the optimum number of clusters), we applied all the clustering algorithms for only two, three and ten clusters representing the minimum (meaningful) number of clusters, the number of taxonomically defined species, and the number of taxonomic entities that have been identified in our dataset. By comparatively evaluating the internal validation metrics, we then identified the optimum number of clusters derived from the different clustering algorithms and contrasted the outputs with the “fuzzy k-means” clustering method. All data analyses and visualizations have been performed with the R statistical language [28] and the factoextra [29], cluster [30], fclust [31] and clusterCrit [32] packages.

3. Results

3.1. Chemistry and Main Constituents

All plant samples were effectively analyzed, and seventy-two chemical components were identified. The total percentage of identified constituents reached 89% or above (94.3 ± 7.0%), with the exception of I9 sample, i.e., Inula verbascifolia subsp. heterolepis from Rodos Island, where essential oil analysis of 67.0% was achieved (Table 2).
The Inula candida subgroup is represented by four subspecific entities and seven samples in our study. Sesquiterpenes dominate the essential oil of this group (I1-I6 and I19), especially oxygenated derivatives (47.3–71.5%). The main metabolite present in all samples was epi-α-cadinol, varying between 13.4% and 42.7% (24.2 ± 10.2%). The I. candida subsp. limonella essential oils were, however, richer in γ-(Ζ)-curcumen-12-ol (36.3 ± 9.2%), an oxygenated sesquiterpene not found in the other I. candida samples. Sesquiterpene hydrocarbons were detected in lesser amounts, with (E)-caryophyllene (4.4 ± 4.6%) reaching highest percentage in I. candida subsp. candida essential oil (I1, 11.5%). Additionally, aromatic compounds were detected (5.8–14.3%), with (3Z)-hexenyl benzoate (7.3 ± 2.1%) basically constituting the major component. Monoterpenes (4.1–14.2%) were identified in considerably lower amounts with linalool (7.2 ± 3.3%) being the most abundant metabolite of this chemical class. An unusual 12.0% presence of dictamnol and a 20.1% of abienol was found in var. rotundifolia from Mt. Krithina (I6). The presence of the labdane diterpene abienol is of interest, as this class of compounds is not common in Asteraceae. This diterpene appears in the oils of all taxa of the I. candida subgroup (5.0 ± 9.8%), except that of I. candida subsp. decalvans; in the I. verbascifolia subgroup it is present in only two samples (1.3% for I8 and 4.7% for I9), while in the essential oils of I. subfloccosa it is present in low amounts (0.6 ± 0.8%). In the literature, (12Z)-abienol is referred to as a component of I. crithmoides L. (synonym of Limbarda critmoides (L.) Dumort.) essential oils derived from aerial parts [33,34,35].
The Inula verbascifolia subgroup is represented by five subspecies and fourteen samples in our analyses; sampling covers a wider geographic range, compared to that of I. candida. Its chemical profile was more heterogeneous, showing qualitative and quantitative differences but also variations related to the main compounds. The essential oils of I. verbascifolia subsp. aschersoniana (I22, I23 and I7) were all rich in sesquiterpenes; however, the samples collected from the Kavala area (I22 and I23) exhibited a particularly similar chemical profile, not only with respect to the main compounds but also their quantities, compared to I7 from Mt. Ossa. The Kavala samples were characterized by sesquiterpene hydrocarbons and their oxygenated analogues (51.9–75.3% and 22.1–33.9%, respectively), while no aromatic components were observed. Major components in these samples were trans-muurola-4(14),5-diene (19.6 ± 3.7%), γ-cadinene (19.7 ± 9.6%), δ-cadinene (16.8 ± 5.4%), and the oxygenated 1-epi-cubenol (13.6 ± 3.3%), i.e., sesquiterpenes that were either detected in notably lower amounts or absent in I7 and the rest of the investigated Inula essential oils. Sample I7 from Mt. Ossa, on the other hand, was significantly richer in oxygenated sesquiterpenes, which almost dominated its chemical composition (47.8%), with epi-α-cadinol (30.5%) as the major component. Additionally, a considerable percentage in aldehydes (20.9%) was also observed in I7, along with aromatic compounds (13.6%), constituents that were detected only in traces or not at all in the Kavala material (I22 and I23).
Inula verbascifolia subsp. heterolepis essential oils (I8, I9 and I10) were characterized by the presence of aldehydes (18.5–31.5%), particularly of tridecanal (14.0 ± 1.5%). Sesquiterpenes were also a major chemical class in the essential oils of this subspecies, particularly the oxygenated derivatives (15.2–34.2%) with spathulenol possessing high percentage especially in I8 (12.8%) and I10 (16.8%) from Samos and Kalimnos Islands, respectively. The material from Rodos Island (I9) was also relatively rich in that chemical group but epi-α-cadinol was the most important representative (8.6%). The same sample showed a higher percentage of aromatic compounds (17.6%) compared to the rest of subsp. heterolepis essential oils (7.6–8.6%), and afforded some chemical compounds that were difficult to match well with those of the libraries or authentic samples. They are presented in Table 2 as Components 1 and 2, along with their mass fragmentation pattern. Worth noting is also the variation in monoterpenes (2.6–22.6%), with I10 from Kalimnos being strikingly richer, particularly in α-pinene (11.2%), a constituent detected in significantly lower percentage in the sample from Samos (1.5%) and Rodos (2.7%).
Inula verbascifolia subsp. methanea essential oils (I11, I12 and I20) were also characterized by a high percentage of sesquiterpenes (32.8–42.9%); however, samples I11 and I12 were almost equally rich in monoterpenes (36.2–45.2%), a chemical group found generally only in relatively low amounts in the rest of the investigated samples. The majority of the studied Inula essential oils have a low content in monoterpenes, with the exception of I. crithmoides (Limbarda crithmoides) [33,34,36] and I. graveolens (L.) Desf., also known as Dittrichia graveolens (L.) Greuter aerial parts oils [37,38], respectively. I20 from Erithres was instead strikingly richer in aromatic compounds (22.2%), particularly in epoxy-pseudoisoeugenyl isobutyrate (9.5%), a compound not encountered in any other sample. Aromatic compounds were detected in much lower amounts in the rest of subsp. methanea samples (1.9–5.0%). I. verbascifolia subsp. methanea from Mt. Parnitha showed a particularly high content in linalool (21.2%), epi-α-cadinol (19.5%) and (Z)-nuciferol (16.6%), components that were detected in either low amounts or were absent in previously investigated samples [39].
Inula verbascifolia subsp. parnassica essential oils showed notable quantitative variations. All samples were characterized by a constant presence of aldehydes (13.5–57.4%); however, I14 was significantly richer in that chemical class, with tridecanal (25.9%) being the main essential oil constituent. I14 from Proussos, the least abundant sample of this group in aldehydes (13.5%), was instead richer in oxygenated sesquiterpenes and specifically in liguloxide (23.8%), a compound only scarcely encountered in all the investigated samples. All three investigated subsp. parnassica essential oils showed also notably high levels of aromatic components (10.0–22.0%). Comparing the chemical profile of a subsp. parnassica sample collected from Mt. Parnassos [39] to the investigated samples herein, evident is the lack of aldehydes and the high abundance of methyl salicylate (23.4%), a metabolite not identified in the essential oils of the present study.
The essential oils of Inula verbascifolia subsp. verbascifolia are differentiated from the rest of the I. verbascifolia subgroup by a rather high percentage of aldehydes (more than 60%), mainly tridecanal (36.3 ± 1.8%), followed by undecanal (13.2 ± 3.0%). Even though both samples were collected from Kefallinia Island, I15 (collected in May) showed higher percentage in alkanes/alkenes (22.3%), while I16 (collected in August) was richer in aromatic compounds (15.8%). The essential oil of I. verbascifolia (subsp. verbascifolia) collected from Italy showed a different chemical profile and was characterized by high amounts of acids (hexadecanoic acid 10.4% and (Z,Z)-9,12-octadecadienoic acid 6.5%), compounds that were not detected in our samples. Aldehydes were not detected in significant amounts in the Italian sample [36].
Overall, the subspecies of I. verbascifolia hardly follow any distinctive taxon-specific pattern in their chemical constituents, apart from I. verbascifolia subsp. verbascifolia, as mentioned above.
Inula subfloccosa’s essential oils were characterized by oxygenated sesquiterpenes (52.8–79.6%) and particularly by the sesquiterpene lactone isoalantolactone (31.0 ± 26.2%), an eudesmanolide not encountered in any other member investigated in this study. Isoalantolactone, along with its isomer alantolactone, has been reported in the root essential oil of I. helenium [40,41]. Sample I18 dominated by that chemical group (79.6%), also showing the highest isoalantolactone levels compared to I17, which was relatively richer in sesquiterpene hydrocarbons compared to I18 (31.3% and 4.7%, respectively), with (E)-caryophyllene (12.0%) as the main representative of that chemical class.
Overall, the essential oils of the analyzed samples were found poor in monoterpenes (traces, rarely up to 45.2%) and diterpenes (rarely up to 20.1%). In opposite, sesquiterpenes and particularly, oxygenated sesquiterpenes (up to 79.6%) prevailed in the group, with the I. candida subgroup exhibiting a predominance of epi-α-cadinol. Total aldehydes were high in I. verbascifolia (up to 66.8%), but low in I. candida (up to 2.8%). Alcohols were altogether insignificant. Aromatic constituents ranged between traces and 22.2% with (3Z)-hexenyl benzoate as the main representative component in all studied Inula essential oils, except the samples I22 and I23 (I. verbascifolia subsp. aschersoniana from northern Greece).

3.2. Population Clustering Based on Chemical Composition

The evaluation of each clustering algorithm based on the three internal validation metrics with increasing number of clusters (2, 3 and 10) is summarized in Table 3. With the exception of the hierarchical agglomerative method, the comparative evaluation of the internal validation metrics for most algorithms suggested that the optimal number of clusters were two (2).
For a preselected number of two clusters, the main groups identified by all classification methods were the I. candida and the I. verbascifolia clusters. The hierarchical clustering algorithm (Figure A1a, Appendix A) grouped together all I. candida members, while populations of I. verbascifolia and I. subfloccosa were all classified to the second cluster, with the exception of I. verbascifolia subsp. aschersoniana (I7) from Mt. Ossa. The k-means method classified together all I. candida and I. subfloccosa populations, including the three I. verbascifolia subsp. aschersoniana populations (Figure A1b, Appendix A). The rest of the I. verbascifolia populations were grouped together in the second cluster. When the k-means method was implemented on Inula populations scores of the first eight PCA axes (accounting for 69.8% of the total variance), the separation between the two key groups were smaller, with I. verbascifolia populations grouped within the I. candida cluster (Figure A1c, Appendix A). Finally, the k-means clustering of the Hellinger pre-transformed PCA scores (eight axes: 72.7% of the total variance), yielded a clear classification of the I. candida and the I. verbascifolia subgroups, with the two I. subfloccosa and the two northern I. verbascifolia subsp. aschersoniana populations (I22 and I23) grouped together within the I. candida subgroup (Figure A1d, Appendix A). The changeability of the clustering outcome, particularly for the two I. subfloccosa populations was highlighted in the fuzzy k-mean algorithm (Figure 1). In this case, the two main (I. candida and I. verbascifolia) clusters were again identified, with the three I. verbascifolia subsp. aschersoniana populations grouped within the I. candida cluster.
Interestingly, this algorithm estimated a borderline cluster membership for both I. subfloccosa populations (close to 50% for each subgroup), suggesting that essentially these populations could equally belong to any one of the two clusters formed.

4. Discussion

4.1. Chemical Diversity Overview and Chemotaxonomic Markers

The analyses of the volatile compounds in the essential oils of the Inula candida / I. verbascifolia group revealed a diverse pattern of metabolomic profiles that may be useful from a chemotaxonomic point of view.
As a rule, sesquiterpenes are the predominant group of components in all populations studied, particularly within taxa of the I. candida subgroup (57.2–76.8%) and I. subfloccosa (84.3–84.1%), apart from the I. verbascifolia subsp. verbascifolia volatiles (samples I15, I16). The I. candida subgroup compounds have a stable significant percentage of oxygenated sesquiterpenes (47.3–71.5%), in contrast to those of the I. verbascifolia subgroup (2.6–47.8%). Epi-α-cadinol is a chemotaxonomically important oxygenated sesquiterpene present in considerable amounts in all members of the I. candida subgroup (13.4–32.4%) but is rarely found in the I. verbascifolia subgroup in amounts higher than 9.5%, with the notable exception of I7 (I. verbascifolia subsp. aschersoniana). Interestingly, (Z)-curcumen-12-ol is a characteristic sesquiterpene found only in the four I. candida subsp. limonella populations examined (22.6–42.1%) and could serve as a potential chemotaxonomic marker for this particular subspecies. Furthermore, isoalantolactone characterizes specifically the I. subfloccosa samples (12.4–49.5%) and may be another chemical marker that emerges within the group.
In agreement with the literature [42], monoterpenes are generally present at a low percentage, except for the two samples of I. verbascifolia subsp. methanea (I11, I12), where they dominate (45.2% and 36.2%, respectively), having cis-chrysanthenol, α-pinene and 1,8-cineole as main components. Their presence may presumably help identifying this particularly subspecies and differentiate it from its relatives.
The presence of the abienol diterpene is of interest: it appears in all taxa of the I. candida subgroup (tr-20.1%), except I. candida subsp. decalvans, a local subspecies of Crete Island. Within the I. verbascifolia subgroup, it is present in only one sample (I8–1.3%), whereas in I. subfloccosa it is present in low amounts (tr-1.1%).
The two I. verbascifolia subsp. aschersoniana samples (I22, I23) from Northern Greece lack aromatic compounds, although these components are present in all Inula taxa studied. These two populations are characterized by a high percentages of trans-muurola-4 (14),5-diene (17.0–22.2%), not found in any other Inula member examined. Therefore, within subsp. aschersoniana two different chemotypes can be distinguished: a trans-muurola-4(14),5-diene-, γ-cadinene-rich chemotype from north-eastern Greece and a 1-epi-cubenol-, tridecanal-rich chemotrype from central Greece.
Finally, the presence of the hydrocarbon aldehydes decanal, undecanal and tridecanal can help differentiate most members of the I. verbascifolia subgroup from the I. candida subgroup, where they are found at very low percentages or are absent. I. verbascifolia subsp. verbascifolia, in particular, is quite rich in tridecanal (35.0–37.5%). In I. subfloccosa, hydrocarbon aldehydes are practically absent.

4.2. Impact of Chemical Diversity to Species Delimitation

Clustering methods and experimental allocation of the taxa participating in our study into clusters best supported the existence of two sets of members: the Ιnula candida and the I. verbascifolia aggregates. The alternatives (three clusters and ten clusters) were also examined using different algorithms but showed no rational groupings in relation to the taxonomic interpretation of the results. As a consequence, we were able to verify only two taxonomic entities at species level, Inula candida and I. verbascifolia, as accepted by several authors [6,21,43]. We discourage, at the same time, the recognition of subspecific entities as independent species [7,8]. However, within species, chemical variation is pronounced and some distinct metabolomic profiles emerge, as in the cases of I. candida subsp. limonella, I. candida subsp. decalvans, I. verbascifolia subsp. methanea and Greek samples of I. verbascifolia subsp. verbascifolia. These local assemblages fit the geographically delimited group of populations that coincides with the subspecies concept. Var. rotundifolia may also merit subspecific recognition, as its high percentages of dictamnol and abienol indicate. It is a local member of the I. candida subgroup, and only one population was available for our analyses. Its deviating metabolomic profile corroborates its morphological differentiation from its allied taxa.
Two particular taxa need further attention. I. verbascifolia subsp. aschersoniana appears quite heterogenous, with its two northernmost populations (I22, I23) being similar to each other with respect to chemical compounds but differing considerably from the southern population (I7) and all the remaining I. verbascifolia samples. Two chemotypes seem to exist within this subspecies. Most clustering analyses attributed them to the I. candida subgroup and the fuzzy k-means analysis indicated a high degree of membership to the group that contained several I. candida members (Figure 1b). This attribution should be further investigated in future research. Currently, it is not supported by morphology. Interestingly, subsp. aschersoniana (as I. aschersoniana) and I. verbascifolia were members of the same monophyletic clade with a high statistical support in the nuclear ITS phylogeny tree of Inula [4] but are placed in different clades in the plastid tree derived from the same samples. However, no I. candida members were involved in this study [4]. A wider sampling and further analysis of subsp. aschersoniana populations would presumably shed light to the chemical variation (and affinities) of this subspecies.
Inula subfloccosa could not be unequivocally placed to any particular cluster in our statistical analyses. Fuzzy k-means clustering gave its two samples an almost 50% membership to either I. candida or I. verbascifolia clusters. I. subfloccosa is a local species chemically characterized by copious isoalantolactone amounts. Its “mobile’’ placement to either I. candida or I. verbascifolia subgroups, depending on the applied clustering algorithms, could presumably be interpreted as the result of hybridization between members of the two subgroups. However, I. subfloccosa has distinct compounds in its essential oil composition and its unique, incense to camphoraceous odor is evident when collected and differrent from all other Inula members examined. Furthermore, no respresentatives of the I. verbascifolia subgroup are known to grow in its vicinity [12] and recent hybridization events are rather improbable. The elucidation of its taxonomic and phylogenetic relationships may need a detailed morphological evaluation and molecular approaches.

Author Contributions

Conceptualization, O.T. and T.C.; methodology, A.K., N.M.F., O.T. and T.C.; software, N.M.F.; formal analysis, A.K., M.E.Z., N.M.F. and O.T.; investigation, A.K. and M.E.Z.; resources, T.C. and O.T.; data curation, O.T.; writing—original draft preparation, T.C., O.T. and N.M.F.; writing—review and editing, T.C., O.T. and N.M.F.; supervision, O.T. All authors have read and agreed to the published version of the manuscript.

Funding

This research received no external funding.

Institutional Review Board Statement

Not applicable in this study as it did not involve humans or animals.

Data Availability Statement

Not applicable.

Acknowledgments

Spyros Tsiftsis, Ioannis Bazos and Eleftherios Kalpoutzakis collected the Inula populations I22-I23, I10, and I5, respectively. They are sincerely thanked.

Conflicts of Interest

The authors declare no conflict of interest.

Appendix A

Figure A1. Classification of the Inula populations based on (a) the hierarchical agglomerative algorithm, (b) the k-means algorithm, (c) the k-means algorithm on the coordinates of the first eight PCA axes (accounting for 69.8% of the volatile compounds variance) and (d) the k-means algorithm on the coordinates of the first eight PCA (72.7%) of the Hellinger pre-transformed volatile compounds matrix.
Figure A1. Classification of the Inula populations based on (a) the hierarchical agglomerative algorithm, (b) the k-means algorithm, (c) the k-means algorithm on the coordinates of the first eight PCA axes (accounting for 69.8% of the volatile compounds variance) and (d) the k-means algorithm on the coordinates of the first eight PCA (72.7%) of the Hellinger pre-transformed volatile compounds matrix.
Diversity 14 01140 g0a1

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Figure 1. (a) Classification of each Inula population based on the fuzzy k-means clustering algorithm. Blue color refers to cluster 1 (mainly I. verbascifolia) and brown color refers to cluster 2 (mainly I. candida). (b) Degree of membership of each population based on the fuzzy k-means clustering algorithm. Population I9 (Ι. verbascifolia subsp. heterolepis) has the least number of compounds identified and was excluded from several analyses.
Figure 1. (a) Classification of each Inula population based on the fuzzy k-means clustering algorithm. Blue color refers to cluster 1 (mainly I. verbascifolia) and brown color refers to cluster 2 (mainly I. candida). (b) Degree of membership of each population based on the fuzzy k-means clustering algorithm. Population I9 (Ι. verbascifolia subsp. heterolepis) has the least number of compounds identified and was excluded from several analyses.
Diversity 14 01140 g001
Table 1. The populations of the Inula candida / I. verbascifolia group investigated, with localities, altimeter, and coordinates. The code number of the last column is also used as an identifier in the chemical and cluster analyses.
Table 1. The populations of the Inula candida / I. verbascifolia group investigated, with localities, altimeter, and coordinates. The code number of the last column is also used as an identifier in the chemical and cluster analyses.
SpeciesSubspecies/VarietyLocalityAltimeter (m)Coordinates (WGS 84)Code Number
Inula candida
subp. candidaKithira Island, Chora village27036°14′ N, 22°59′ EI1
subsp. decalvansKriti Island, Mt. Dikti, northern parts138035°07′ N, 25°29′ EI5
subsp. limonellaEvvia Island, Mt. Dirfis, near the shelter111038°36′ N, 23°51′ EI2
subsp. limonellaPeloponnisos, Mt. Parnonas, upper parts 175037°16′ N, 22°36′ EI3
subsp. limonellaPeloponnisos, Mt. Koulochera, upper parts106036°49′ N, 22°59′ EI4
subsp. limonellaSterea Ellas, Mt. Kitheronas, near the summit131038°10′ N, 23°14′ EI19
var. rotundifoliaPeloponnisos, Mt. Krithina, near the top58036°28′ N, 23°08′ EI6
Inula verbascifolia
subsp. aschersonianaThessalia, Mt. Ossa, near the shelter148039°48′ N, 22°41′ EI7
subsp. aschersonianaMacedonia, NE of Kavala71041° 01′ Ν, 24°27′ ΕI22
subsp. aschersonianaMacedonia, N of Krioneri village46041° 02′ Ν, 24°22′ ΕI23
subsp. heterolepisSamos Island, Mt. Kerkis, foothills45037°43′ N, 26°35′ EI8
subsp. heterolepisRodos Island, NNW of Laerma village26036°11′ N, 27°57′ EI9
subsp. heterolepisKalimnos Island, between Masouri and Arginondas settlements5037°01′ N, 26°56′ EI10
subsp. methaneaSterea Ellas, Mt. Imittos, Kesariani suburb63037°58′ N, 23°49′ EI11
subsp. methaneaSterea Ellas, Mt. Pateras, upper parts98038°06′ N, 23°27′ EI12
subsp. methaneaSterea Ellas, E of Erithres village43038°13′ N, 23°23′ EI20
subsp. parnassicaSterea Ellas, near Proussos village77038°45′ N, 21°39′ EI13
subsp. parnassicaSterea Ellas, Mt. Parnassos, between Arachova and Livadi113038°29′ N, 22°33′ EI14
subsp. parnassicaSterea Ellas, E of Delfi archaeological site54038°28′ N, 22°30′ EI21
subsp. verbascifoliaKefallinia Island, Livadi village2038°15′ N, 20°25′ EI15
subsp. verbascifoliaKefallinia Island, Angonas village20038°18′ N, 20°29′ EI16
Inula subfloccosa Evvia Island, W of Mt. Ochi39038°02′ N, 24°25′ EI17
Inula subfloccosa Evvia Island, between Agios Dimitrios and Kalliani villages28038°07′ N, 24°26′ EI18
Table 2. Chemistry of the essential oils obtained from the aerial parts of the Inula candida and I. verbascifolia members, together with the related I. subfloccosa. Numbers refer to percentages (%), estimated in relation to the total oil yield.
Table 2. Chemistry of the essential oils obtained from the aerial parts of the Inula candida and I. verbascifolia members, together with the related I. subfloccosa. Numbers refer to percentages (%), estimated in relation to the total oil yield.
Components a/PopulationsRR bI1I5I2I3I4I19I6I7I22I23I8I9I10I11I12I20I13I14I21I15I16I17I18
Hexanal801trtrtrtrtrtrtrtr--trtr2.61.3-trtrtrtrtr-trtr
(2E)-Hexenal855trtr1.00.71.01.3tr1.1tr-trtr4.1trtrtrtr4.3trtrtrtrtr
Hexanol870trtr0.4trtr0.8trtrtr-trtrtr0.9trtrtr3.6trtr-trtr
α-Pinene939trtrtr-trtrtr-2.23.81.52.711.210.012.0tr-trtrtrtrtr-
1,8-Cineole1031tr-tr-------trtr5.16.19.22.3tr--tr-tr-
γ-Terpinene1059-tr-trtrtrtr---trtrtr0.62.5tr-trtrtr-tr-
Linalool10962.512.55.55.36.38.69.82.6tr-1.1tr4.31.32.5tr2.413.35.25.3tr5.32.9
Nonanal11001.91.50.71.10.50.6tr1.4trtr0.9tr2.01.93.0tr1.27.04.12.83.6trtr
cis-Chrysanthenol1164----------trtr2.019.94.5tr--4.8----
Terpinen-4-ol1177trtr--trtrtr---trtrtr1.52.3tr-trtrtr-tr-
α-Terpineol11881.61.70.8trtr0.70.9tr--trtrtr5.82.01.33.0tr6.1trtrtrtr
Decanal1201trtr0.31.00.6trtr2.2--1.2tr2.44.514.14.49.16.93.02.85.3trtr
Carvacrol1299trtrtrtrtr-trtr--trtrtrtr1.2trtr-8.0trtrtr-
Undecanal1306trtr-trtrtrtr3.4trtr3.4tr3.9trtrtr0.77.22.811.115.3--
Isobutyl benzoate1329trtr-trtrtrtr0.6--trtrtr0.81.0tr3.23.52.6trtrtr-
β-Bourbonene1388----trtr-------tr1.41.3-2.6tr----
(Z)-Jasmone1392-trtrtrtrtr1.8---trtrtrtrtrtrtrtrtrtr-3.11.3
Dodecanal1408-tr---tr-1.9--3.43.14.1trtrtr-6.13.05.57.6--
(E)-Caryophyllene141911.54.80.4tr1.72.29.9trtr-1.34.41.33.24.63.03.43.78.7trtr12.01.9
Dictamnol1429-3.5--tr-12.0----------------
allo-Aromadendrene1460trtr0.6tr0.9trtrtr--1.3trtrtr1.3trtr-trtr-8.6tr
Dodecanol1470----tr--tr--tr-----trtrtrtr3.7--
trans-Cadina-1(6),4-diene1476-trtrtrtrtr--tr2.7---trtr--------
ar-Curcumene1480-2.80.71.0trtr-tr--0.8trtr---1.6----trtr
γ-Curcumene1482-5.01.04.1tr1.6----tr-tr-tr------trtr
Germacrene D1485trtr--tr-trtr--tr--0.72.47.0-tr3.4---tr
β-Selinene1490trtrtr-trtr-----tr-1.2trtrtr-tr--4.71.4
trans-Muurola-4(14),5-diene1493-trtrtrtrtrtr-22.217.0---0.5tr---tr----
γ-Amorphene1495---tr---------4.2---------
Bicyclogermacrene1500tr---trtrtr---5.3tr1.6-4.62.5--tr3.1tr6.01.4
Tridecanal1510-------10.9--14.315.412.40.51.62.51.625.913.837.535.0--
δ-Amorphene1512trtrtr---trtr-----4.0-------trtr
γ-Cadinene15131.2tr1.01.31.5trtr-26.412.9----trtr-----trtr
δ-Cadinene1523trtr1.03.51.44.5tr1.020.612.91.13.9tr7.82.79.4trtr2.3tr-trtr
Lilial1528-------------------tr5.9--
trans-Calamenene1529tr-tr-tr---6.16.4---tr---------
Liguloxide1536-tr--------------23.8--trtrtr1.3
(3Z)-Hexenyl benzoate15669.85.86.37.210.66.74.811.2--8.07.47.61.14.05.78.66.510.1tr-8.81.6
Spathulenol15784.5tr---tr----12.82.416.81.97.33.4trtrtr2.8tr20.213.8
Hexyl benzoate15804.5tr0.3tr2.5tr5.6tr---trtrtrtr3.2trtr tr-
Caryophyllene oxide15838.8tr3.01.81.94.38.42.9--1.3tr5.30.92.7tr5.24.78.8trtr7.63.2
Component 1 c1589-------tr---4.7----trtrtr--tr-
Component 2 d1611-----------28.0------tr--trtr
β-Copaen-4-α-ol15905.0tr---------tr0.6tr1.8----tr---
1-epi-Cubenol1628--trtrtrtrtr-11.215.9tr--3.7tr------tr-
Muurola-4,10(14)-dien-1-β-ol1631trtr---trtr2.4----3.3tr1.22.7--tr--trtr
Isospathulenol1634tr---------4.5tr--trtr---tr-trtr
epi-α-Cadinol164024.942.720.417.032.413.418.830.55.89.09.68.65.8-2.15.26.3trtr2.7trtr-
Caryophylla-4(12),8(13)-dien-5α-ol16412.6----trtrtr----trtrtrtrtr-tr--trtr
Caryophylla-4(12),8(13)-dien-5β-ol16425.3----tr---------tr1.9-tr--2.4tr
α-Muurolol1646----------2.0trtrtrtr-2.8trtr-tr--
Cubenol1647tr------------3.9---------
β-Eudesmol1650----tr------------tr5.7--4.08.1
Himachalol1653--4.33.5-1.0-----------------
α-Cadinol16548.414.24.33.510.84.26.311.25.19.03.14.22.40.81.85.30.6trtrtrtr--
Helifolenol A1675--0.1tr1.62.5-----------------
Germacra-4(15),5,10(14)-trien-1-α-ol1686trtr----tr------trtr3.1--tr----
γ-(Ζ)-Curcumen-12-ol1729--39.441.022.642.1-----------------
2-Hexyl-(E)-cinnamaldehyde1749----------------tr---9.9--
7,14-Anhydro-amorpha-4,9-diene1756----------------------2.4
β-(Z)-Curcumen-12-ol1757-trtrtrtr1.0---------------3.1tr
Benzyl benzoate1760trtr1.4trtrtrtr1.8tr-0.65.8trtrtr3.87.5trtrtrtrtrtr
Epoxy-pseudoisoeugenyl isobutyrate1793---------------9.5-------
2-Ethyl-hexyl salicylate1807---trtrtrtrtr--trtrtrtr--1.1--trtr--
Hexadecanal1822trtrtrtrtrtrtr---1.3tr---tr0.9-tr3.7trtrtr
Hexahydrofarnesyl acetone18403.9trtrtrtrtrtr0.8--trtrtrtrtrtr1.74.13.1tr2.6trtr
Benzyl salicylate1865trtr0.8trtrtrtrtr--tr4.4trtrtrtr1.6-trtrtrtrtr
Hexadecanol1875-tr-tr-trtrtr-------tr-trtrtr3.4tr-
Isoalantolactone1952---------------------12.449.5
Heneicosane2100trtrtrtrtrtr-tr--trtrtr--tr3.4-trtrtrtrtr
Component 3 e2126trtrtrtrtrtrtrtr--trtrtrtrtr7.5-trtr--trtr
Abienol2149tr-2.87.42.32.520.1---1.34.7---------tr1.1
Pentacosane2500trtrtrtrtrtrtr0.8tr-trtrtrtrtr4.6trtr3.8trtrtrtr
Heptacosane2700trtrtrtrtrtrtr1.4tr-3.5trtrtrtr5.8trtrtr7.0trtrtr
Nonacosane2900trtrtrtrtrtrtr3.5--7.0trtrtrtr6.4trtrtr15.34.5trtr
TOTAL 96.494.596.599.498.698.098.491.699.689.690.667.098.889.093.892.491.699.499.399.696.898.289.9
HYDROCARBONS
Alkanes/Alkenes trtrtrtrtrtrtr5.7tr-10.5trtrtrtr16.83.4tr3.822.34.5trtr
Alcohols trtr0.4trtr0.8trtrtr-trtrtr0.9trtrtr3.6trtr7.1trtr
Aldehydes 1.91.52.02.82.11.9tr20.9trtr24.518.531.58.218.76.913.557.426.763.466.8trtr
TERPENES
Monoterpenes 4.114.26.35.36.39.310.72.62.23.82.62.722.645.236.23.65.413.324.15.3tr5.32.9
Sesquiterpene hydrocarbons 12.712.64.79.95.58.39.91.075.351.99.88.32.921.617.023.25.06.314.43.1tr31.34.7
Oxygenated sesquiterpenes 63.460.471.566.869.368.547.347.822.133.933.315.234.211.216.919.742.38.817.65.52.652.879.6
Diterpenes tr-2.87.42.32.520.1---1.34.7---------tr1.1
AROMATIC
COMPONENTS
14.35.88.87.213.16.710.413.6--8.617.67.61.95.022.222.010.012.7tr15.88.81.6
a Compounds listed in the order of elution on a HP-5MS column under the specified chromatographic conditions. b Relative retention indices calculated from the retention times of the compounds in relation to those of a series of n-alkanes (C8–C29) analyzed under the same chromatographic conditions. c m/z (rel. int., %): 220 (0.8), 206 (10), 191 (9), 173 (6), 162 (100), 147 (98), 133 (10), 119 (10), 105 (26), 91 (47), 79 (15), 67 (10), 55 (10), 41 (12). d m/z (rel. int., %): 222 (0.7), 206 (27), 191 (12), 173 (7), 162 (100), 147 (87), 133 (10), 120 (78), 105 (52), 91 (48), 79 (28), 67 (15), 55 (15), 41 (22). e m/z (rel. int., %): 204 (2), 189 (5), 175 (32), 149 (21), 135 (29), 121 (27), 109 (50), 95 (43), 81 (100), 69 (60), 55 (42), 41 (57).
Table 3. Internal cluster validation metrics for different algorithms and number of clusters. Values in bold indicate the per algorithm optimal number of clusters. SI is the silhouette index, DI is the Dunn index and CHI is the Calinski–Harabasz index.
Table 3. Internal cluster validation metrics for different algorithms and number of clusters. Values in bold indicate the per algorithm optimal number of clusters. SI is the silhouette index, DI is the Dunn index and CHI is the Calinski–Harabasz index.
Number of ClustersAlgorithmSIDICHI
2hierarchical agglomerative0.2180.4106.730
30.2430.3376.000
100.2690.7038.146
2k-means0.1540.3964.550
30.2200.3964.504
100.0640.3333.160
2k-means PCA0.1130.2393.906
30.0470.2392.531
100.0420.3333.686
2k-means PCA (Hellinger)0.1460.3114.211
30.1550.3114.036
100.0600.3333.168
2fuzzy k-means0.1780.3964.995
30.2220.3964.504
100.0640.3333.160
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Koutsaviti, A.; Zografaki, M.E.; Fyllas, N.M.; Tzakou, O.; Constantinidis, T. Diversity of Volatile Compounds in the Inula candida / I. verbascifolia Group (Asteraceae-Inuleae) and Its Impact on Species Delimitation. Diversity 2022, 14, 1140. https://doi.org/10.3390/d14121140

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Koutsaviti A, Zografaki ME, Fyllas NM, Tzakou O, Constantinidis T. Diversity of Volatile Compounds in the Inula candida / I. verbascifolia Group (Asteraceae-Inuleae) and Its Impact on Species Delimitation. Diversity. 2022; 14(12):1140. https://doi.org/10.3390/d14121140

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Koutsaviti, Aikaterini, Maria Eleftheria Zografaki, Nikolaos M. Fyllas, Olga Tzakou, and Theophanis Constantinidis. 2022. "Diversity of Volatile Compounds in the Inula candida / I. verbascifolia Group (Asteraceae-Inuleae) and Its Impact on Species Delimitation" Diversity 14, no. 12: 1140. https://doi.org/10.3390/d14121140

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