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Short Note

Dichloro-Bis(1-cinnamyl-benzimidazole)-Cobalt(II)

1
Department of Science Education, Faculty of Education, Cumhuriyet University, 58040 Sivas, Turkey
2
Synthèse Organométallique et Catalyse, UMR-CNRS 7177, Strasbourg University, 67008 Strasbourg, France
3
Drug Application and Research Center, İnönü University, 44280 Malatya, Turkey
*
Authors to whom correspondence should be addressed.
Molbank 2024, 2024(4), M1911; https://doi.org/10.3390/M1911
Submission received: 2 October 2024 / Revised: 21 October 2024 / Accepted: 22 October 2024 / Published: 31 October 2024
(This article belongs to the Section Structure Determination)

Abstract

:
Dichloro-bis(1-cinnamyl-benzimidazole)-cobalt(II) was prepared in one step using a cobalt precursor CoCl2 and corresponding substituted benzimidazole. The complex was fully characterized using IR, elemental analysis, and mass- and NMR spectroscopy. In the solid state, the cobalt atom displays a typical tetrahedral geometry and is coordinated to two chlorine atoms and two benzimidazole moieties.

1. Introduction

Benzimidazole derivatives are aromatic heterocyclic compounds [1] with a range of biological functions [2,3,4,5] and wide coordination properties [6,7,8,9,10], especially with cobalt precursors [11]. The latter complexes are of particular interest due to their magnetic [12,13], catalytic [14,15], and medicinal properties, including their antibacterial [16,17] and anticancer effects [18,19].
Based on the properties of the cobalt complexes discussed above, and based on our experience in the synthesis of organometallic complexes incorporating N-alkyl benzimidazole derivatives [20,21], we present here the synthesis of a cobalt(II) complex (2) comprising two cinnamyl-benzimidazole moieties (Figure 1).

2. Results and Discussion

The desired dichloro-bis(1-cinnamyl-benzimidazole)-cobalt(II) complex (2) was obtained by reacting one equivalent of the CoCl2 precursor and two equivalents of 1-cinnamyl-benzimidazole 1 in ethanol at room temperature. After 4 h, the blue precipitate was filtered, washed with diethylether, and dried to afford, in a 96% isolated yield, the blue cobalt(II) complex 2 (Scheme 1).
The complex, which is stable against air and moisture in both the solid state and in solution, was characterized using NMR 1H spectroscopy, elemental analysis, infrared spectroscopy, and mass spectroscopy (see Figures S1–S4 in Supplementary Materials).
The 3d configuration of the cobalt(II) cation unequivocally determines the paramagnetic properties of the formed blue complex. Its 1H NMR spectrum reveals a signal within the range of −3 to 28 ppm.
The coordination of the cinnamyl-benzimidazole (1) to the metal center is clearly evident from the FT-IR spectrum of complex 2 [20]. There is a distinct redshift of the C=N vibration band. In fact, the ν(CN) band changes from 1485 cm−1 for the free ligand to 1511 cm−1 after coordination, as can be seen in the IR spectra.
The formation of the [CoCl2(1)2] complex was unambiguously deduced from the mass spectrum, which shows intense peaks at m/z = 562.14 and 620.10, corresponding to the [M − Cl]+ and [M + Na]+ cations, respectively, with the expected isotopic profiles. Furthermore, the result of an elemental analysis, carried out on dried crystals, is in accordance with the presence of two cinnamyl-benzimidazole moieties per cobalt atom.
An X-ray diffraction study on a single crystal of the complex dichloro-bis(1-cinnamyl-benzimidazole)-cobalt(II) (2) definitively confirmed the presence of two benzimidazole moieties coordinated to the metal center. Suitable crystals for the solid-state analysis were obtained through the slow diffusion of diethylether in a dichloromethane solution of the cobalt(II) complex. This complex crystallizes in the monoclinic space group P21/n with two molecules of dichloromethane, one of which is disordered over two positions with a ratio of 0.9/0.1 (Figure 2).
As anticipated, the coordination sphere of the metal center comprises two chlorine atoms (Co1-Cl1 2.2521(11) and Co1-Cl2 2.2559(12) Å) and two benzimidazole moieties (Co1-N1 2.006(3) and Co1-N3 1.998(3) Å). The cobalt atom has a slightly distorted tetrahedral geometry with N1-Co1-N3 and Cl1-Co1-Cl2 angles of 116.07(13) and 116.37(5)°, respectively. These values are close to those previously reported for [CoCl2(L)2] (L = substituted benzimidazole), as, for example, in dichloro-bis [1-(but-2-enyl)-5-nitro-benzimidazole-κN3]-cobalt(II) [22], dichloro-{N,N-bis[(1-allyl- benzimidazol-2-yl)methyl)aniline}-cobalt(II) [23], dichloro-bis[1-(prop-2-en-1-yl)-benz- imidazole]-cobalt(II) [24], dichloro-bis{1-[(2-furyl)methylene]-2-(2-furyl)benzimidazole}- cobalt(II) [11], or dichloro-bis[1-(thiophen-2-yl) methyl-2-(thiophen-2-yl)-benzimida- zole]-cobalt(II) [25]. The two benzimidazole rings are inclined at a dihedral angle of 46.48°. One of the cinnamyl-benzimidazole ligands has a phenyl group perpendicular to the benzimidazole ring, with a dihedral angle of 87.67°, while in the other, the phenyl group is oblique to the ring, with a dihedral angle of 60.81°.
In the solid state, cobalt complexes interact intermolecularly via CH•••Cl interactions between the hydrogen and chlorine atoms of the complexes and also via the hydrogen and chlorine atoms of the dichloromethane molecules present in the crystal lattice (Figure 3). These latter molecules of the solvent also interact with aromatic benzimidazole and phenyl groups through Cl•••CH intermolecular bonds (with distances in the range of 3.417 to 3.636 Å).

3. Materials and Methods

3.1. General

The manipulations were carried out under a dry argon atmosphere with dried solvents. Routine 1H spectrum was recorded with AC 300 Bruker FT instruments (Bruker BioSpin, Rheinstetten, Germany) in CDCl3 and referenced to residual protonated solvent (δ = 7.26 ppm). Chemical shifts are reported in ppm. Mass spectra were recorded using a Bruker MicroTOF spectrometer (ESI-TOF). Infrared spectra were recorded using a Bruker ATR FT-IR Alpha-P spectrometer. Elemental analyses were carried out by the Service de Microanalyse, Institut de Chimie, Université de Strasbourg. 1-cinnamyl-benzimidazole (1) was prepared according to an adapted published procedure [26].

3.2. Procedure for the Preparation Dichloro-Bis(1-cinnamyl-benzimidazole)-Cobalt(II) (2)

In a Schlenk tube in an inert atmosphere of argon, a solution of CoCl2 (0.041 g, 0.32 mmol) and (1-cinnamyl-benzimidazole (0.150 g, 0.64 mmol) in ethanol (10 mL) was stirred at room temperature. After 4 h, the formed blue precipitate was filtered, washed with diethylether (3 × 10 mL), and dried under vacuum to give complex 2 as blue solid in 96% yield (0.184 g). FT-IR: ν(CN) 1511 cm−1; 1H NMR (300 MHz, CDCl3): δ = 27.28 (s, 2H), 14.99 (s, 4H), 8.93 (s, 2H), 7.81–7.39 (m, 12H), 5.37 (s, 2H), 3.16 (s, 2H), 1.42 (s, 2H), −2.67 (s br, 2H) ppm. MS (ESI-TOF): m/z = 562.14 [M − Cl]+ and 620.10 [M + Na]+ (expected isotopic profiles). Elemental analysis (%): calcd for C32H28N4CoCl2 (598.43): C: 64.23; H: 4.72; N: 9.36; found C: 64.03; H: 4.66 N: 9.23.

3.3. X-Ray Crystal Structure Analysis of Complex 2

Single crystals of cobalt(II) complex 2 suitable for X-ray analysis were obtained via slow diffusion of Et2O into a CH2Cl2 solution of the complex. The samples were studied using a Bruker APEX-II CCD using Mo-Kα radiation (λ = 0.71073 Å). The structures were solved with SHELXT-2018/2 [27] and refined with SHELXL-2019/3 [28]. Crystal Data for C32H28Cl2N4Co•(CH2Cl2)2 (M = 768.26 g mol−1) are as follows: monoclinic, space group P21/n (no. 11), a = 13.9953(16) Å, b = 16.321(2) Å, c = 15.8898(19) Å, β = 100.662(4)°, V = 3566.8(7) Å3, Z = 4, T = 173(2) K, μ(Mo-Kα) = 0.961 mm−1, Dcalc = 1.431 g cm−3, 69,308 reflections collected (1.783 ≤ θ ≤ 27.983°), and 8563 unique (Rint = 0.1311, Rsigma = 0.0927). All these data were used in all calculations. The final R1 was 0.0624 (I > 2.0 σ(I)), and wR2 was 0.1658 (all data). CCDC 2385973 contains the supplementary crystallographic data for this paper. The data can be obtained free of charge from The Cambridge Crystallographic Data Centre via www.ccdc.cam.ac.uk/structures (accessed on 15 September 2024).

4. Conclusions

We successfully synthesized and characterized the new dichloro-bis(1-cinnamyl-benzimidazole)-cobalt(II) complex. Although paramagnetic, this complex could be characterized via IR, elemental analysis, mass spectroscopy, and NMR spectroscopy, and its structure was determined via an X-ray study. The cobalt atom adopts a slightly distorted tetrahedral conformation. In the solid state, two molecules of dichloromethane are present in the crystal lattice.

Supplementary Materials

Characterization data for dichloro-bis(1-cinnamyl-benzimidazole)- cobalt(II) complex (2) are represented in the following figures: Figure S1. FT-IR spectrum; Figure S2. Mass spectrum (ESI-TOF); Figure S3. Mass spectrum (ESI-TOF); Figure S4. 1H NMR spectrum (CDCl3); Figure S5. Packing pattern in the crystal structure of complex 2; and Figure S6. Positioning of the molecules of dichloromethane in the lattice.

Author Contributions

Conceptualization, N.Ş. and D.S.; methodology, N.Ş. and D.S.; validation, N.Ş. and D.S.; formal analysis, N.Ş. and D.S.; investigation, N.Ş.; resources, D.S.; data curation, N.Ş. and D.S.; writing—original draft preparation, N.Ş. and D.S.; writing—review and editing, D.S.; supervision, İ.Ö. All authors have read and agreed to the published version of the manuscript.

Funding

This research received no external funding.

Data Availability Statement

Data are available in a publicly accessible repository.

Conflicts of Interest

The authors declare no conflicts of interest.

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Figure 1. Targeted cobalt(II) complex, 2, incorporating two cinnamyl-benzimidazole moieties.
Figure 1. Targeted cobalt(II) complex, 2, incorporating two cinnamyl-benzimidazole moieties.
Molbank 2024 m1911 g001
Scheme 1. Synthesis of cobalt(II) complex 2.
Scheme 1. Synthesis of cobalt(II) complex 2.
Molbank 2024 m1911 sch001
Figure 2. ORTEP diagram of cobalt(II) complex 2 (50% probability thermal ellipsoids). Important bond lengths (Å) and angles (°): Co1-N1 2.006(3), Co1-N3 1.998(3), Co1-Cl1 2.2521(11), Co1-Cl2 2.2559(12), N1-C1 1.316(5), C1-N2 1.354(5), N2-C2 1.384(5), C2-C7 1.396(5), C7-N1 1.393(5), N3-C17 1.324(5), C17-N4 1.342(5), N4-C18 1.391(5), C18-C23 1.378(5), C23-N3 1.400(5), N1-Co1-N3 116.07(13), Cl1-Co1-Cl2 116.37(5), Cl1-Co1-N1 104.09(10), N1-Co1-Cl2 108.10(10), Cl2-Co1-N3 108.46(10), N3-Co1-Cl1 104.01(10), C1-N1-Co1 123.2(3), C7-N1-Co1 130.5(3), C17-N3-Co1 124.8(3), and C23-N3-Co1 130.7(3).
Figure 2. ORTEP diagram of cobalt(II) complex 2 (50% probability thermal ellipsoids). Important bond lengths (Å) and angles (°): Co1-N1 2.006(3), Co1-N3 1.998(3), Co1-Cl1 2.2521(11), Co1-Cl2 2.2559(12), N1-C1 1.316(5), C1-N2 1.354(5), N2-C2 1.384(5), C2-C7 1.396(5), C7-N1 1.393(5), N3-C17 1.324(5), C17-N4 1.342(5), N4-C18 1.391(5), C18-C23 1.378(5), C23-N3 1.400(5), N1-Co1-N3 116.07(13), Cl1-Co1-Cl2 116.37(5), Cl1-Co1-N1 104.09(10), N1-Co1-Cl2 108.10(10), Cl2-Co1-N3 108.46(10), N3-Co1-Cl1 104.01(10), C1-N1-Co1 123.2(3), C7-N1-Co1 130.5(3), C17-N3-Co1 124.8(3), and C23-N3-Co1 130.7(3).
Molbank 2024 m1911 g002
Figure 3. Self-organized structure of complex 2 formed via CH•••Cl interactions (in red).
Figure 3. Self-organized structure of complex 2 formed via CH•••Cl interactions (in red).
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Şahin, N.; Özdemir, İ.; Sémeril, D. Dichloro-Bis(1-cinnamyl-benzimidazole)-Cobalt(II). Molbank 2024, 2024, M1911. https://doi.org/10.3390/M1911

AMA Style

Şahin N, Özdemir İ, Sémeril D. Dichloro-Bis(1-cinnamyl-benzimidazole)-Cobalt(II). Molbank. 2024; 2024(4):M1911. https://doi.org/10.3390/M1911

Chicago/Turabian Style

Şahin, Neslihan, İsmail Özdemir, and David Sémeril. 2024. "Dichloro-Bis(1-cinnamyl-benzimidazole)-Cobalt(II)" Molbank 2024, no. 4: M1911. https://doi.org/10.3390/M1911

APA Style

Şahin, N., Özdemir, İ., & Sémeril, D. (2024). Dichloro-Bis(1-cinnamyl-benzimidazole)-Cobalt(II). Molbank, 2024(4), M1911. https://doi.org/10.3390/M1911

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