Next Article in Journal
Mechanistic Links Underlying the Comorbidity of Osteoporosis and Osteoarthritis: Cell Fate Plasticity Driven by the Subchondral Bone Microenvironment
Previous Article in Journal
Anticancer Activity of Miswak Root Extract in Breast Cancer Cell Line: HRLC-MS/MS Profiling, In Vitro Evaluation, and In Silico Analysis
 
 
Font Type:
Arial Georgia Verdana
Font Size:
Aa Aa Aa
Line Spacing:
Column Width:
Background:
This is an early access version, the complete PDF, HTML, and XML versions will be available soon.
Review

Beyond the Core: The Role of Supplementary Short Tandem Repeats in Forensic Genetics

by
Vitória Ramos
1,
Benedita Ferreira-Silva
2,
Jennifer Fadoni
2,3,
António Amorim
2,3,4,5,6 and
Laura Cainé
1,3,4,*
1
Faculty of Medicine, University of Porto, 4200-319 Porto, Portugal
2
National Institute of Legal Medicine and Forensic Sciences, I.P., North Branch, 4050-202 Porto, Portugal
3
LAQV&REQUIMTE, Laboratory of Applied Chemistry, Department of Chemical Sciences, Faculty of Pharmacy, University of Porto, 4050-313 Porto, Portugal
4
National Institute of Legal Medicine and Forensic Sciences, I.P., Centre Branch, 3000-548 Coimbra, Portugal
5
Faculty of Sciences, University of Lisbon, 1749-016 Lisbon, Portugal
6
Faculty of Medicine, University of Lisbon, 1649-028 Lisbon, Portugal
*
Author to whom correspondence should be addressed.
Int. J. Mol. Sci. 2026, 27(13), 5756; https://doi.org/10.3390/ijms27135756 (registering DOI)
Submission received: 28 May 2026 / Revised: 20 June 2026 / Accepted: 24 June 2026 / Published: 25 June 2026
(This article belongs to the Special Issue Research Progress of Forensic Genetics)

Abstract

Conventional forensic DNA profiling predominantly utilizes established core sets of autosomal short tandem repeats (STRs), such as the FBI’s Combined DNA Index System (CODIS) and the European Standard Set (ESS). While these panels are effective for standard forensic casework, they may be inadequate in more demanding scenarios, including severely degraded samples, complex multi-contributor mixtures, and kinship cases with deficiencies, where enhanced discriminatory capability is crucial. Additional non-core STR loci address these challenges while maintaining the non-coding, phenotypically uninformative nature that ensures the legal and ethical acceptability of forensic genetic evidence in court. This review assesses the forensic applications, population genetic parameters, validation requirements, and ethical considerations associated with non-core STR loci. A representative supplementary STR panel is presented as a case study to illustrate both the forensic value and the analytical requirements associated with the implementation of extended non-core STR systems. Challenges in implementation were identified in areas such as nomenclature standardization, backward compatibility with existing national databases, and geographic gaps in population reference data. The review concludes that a hybrid strategy, which retains core capillary electrophoresis (CE)-based profiling for routine casework and employs extended non-core panels for complex cases, represents the most practical path for the field.
Keywords: short tandem repeats; forensic genetics; non-core markers; Investigator® HDplex; human identification; population genetics; validation; massively parallel sequencing short tandem repeats; forensic genetics; non-core markers; Investigator® HDplex; human identification; population genetics; validation; massively parallel sequencing

Share and Cite

MDPI and ACS Style

Ramos, V.; Ferreira-Silva, B.; Fadoni, J.; Amorim, A.; Cainé, L. Beyond the Core: The Role of Supplementary Short Tandem Repeats in Forensic Genetics. Int. J. Mol. Sci. 2026, 27, 5756. https://doi.org/10.3390/ijms27135756

AMA Style

Ramos V, Ferreira-Silva B, Fadoni J, Amorim A, Cainé L. Beyond the Core: The Role of Supplementary Short Tandem Repeats in Forensic Genetics. International Journal of Molecular Sciences. 2026; 27(13):5756. https://doi.org/10.3390/ijms27135756

Chicago/Turabian Style

Ramos, Vitória, Benedita Ferreira-Silva, Jennifer Fadoni, António Amorim, and Laura Cainé. 2026. "Beyond the Core: The Role of Supplementary Short Tandem Repeats in Forensic Genetics" International Journal of Molecular Sciences 27, no. 13: 5756. https://doi.org/10.3390/ijms27135756

APA Style

Ramos, V., Ferreira-Silva, B., Fadoni, J., Amorim, A., & Cainé, L. (2026). Beyond the Core: The Role of Supplementary Short Tandem Repeats in Forensic Genetics. International Journal of Molecular Sciences, 27(13), 5756. https://doi.org/10.3390/ijms27135756

Note that from the first issue of 2016, this journal uses article numbers instead of page numbers. See further details here.

Article Metrics

Article metric data becomes available approximately 24 hours after publication online.
Back to TopTop