3. Materials and Methods
All commercially available reagents (purchased from Merck KGaA, (Darmstadt, Germany), Tokyo Chemical Industry Co., Ltd. (TCI) (Fukaya, Japan), Thermo Fisher (Kandel) GmbH (Kandel, Germany), and Fluorochem Ltd. (Hadfield Derbyshire, UK)) were used without further purification. Organic solvents (i.e., CH
2Cl
2, THF, DMSO) were dried by allowing them to stand over activated (oven-roasted under high-vacuum) 3Å molecular sieves (20% mass/volume (m/v) loading of the desiccant) at least for 48 h before use according to lit. [
64]; DMSO was additionally passed through a column packed with activated SiO
2 (25 g, Silica gel 60
® (0.015–0.040 mm), Merck KGaA, (Darmstadt, Germany)) before 3Å molecular sieves treatment;
n-hexane, EtOAc, and acetone were purified by fractional distillation over an adequate desiccant under nitrogen before use; Et
2O was at first distilled from H
2SO
4 and subsequently dried by dropping small pieces of sodium metal into a buttle containing this solvent. Chromatography grade
n-hexane and isopropanol (2-PrOH) used in high performance liquid chromatography (HPLC) were purchased from Avantor Performance Materials Poland S.A. (formerly POCH Polish Chemicals Reagents).
The enzyme preparations were purchased from Novozymes A/S (Bagsvaerd, Denmark), STREM Chemicals, Inc. (Newburyport, MA, USA), Amano Pharmaceutical Co., Ltd. (Nagoya, Japan), Sigma-Aldrich (currently Merck) (Darmstadt, Germany), Roche (Basel, Switzerland), Boehringer Mannheim (currently Roche Diagnostics) (Basel, Switzerland), and were used without pre-treatment (for details, see
Table S1 appended in Supplementary Materials).
Analytical scale enzymatic reactions were performed in thermo-stated glass vials (V = 4 mL) placed in Chemglass CG-1991-04 GOD Anodized Aluminum Reaction Block, 48 Position, 19 mm Hole Depth, For Circular Top Hot Plate Stirrer. All non-aqueous reactions were carried out under oxygen-free (argon-protective) conditions using over-dried glassware.
Melting point (mp) ranges, uncorrected, were determined with a commercial apparatus (Thomas-Hoover “UNI-MELT” capillary melting point apparatus) on samples contained in rotating capillary glass tubes open on one side (1.35 mm inner diam. and 80 mm length).
Analytical thin-layer chromatography was carried on TLC aluminum plates with silica gel Kieselgel 60 F254 (Merck, Germany) (0.2 mm thickness film containing a fluorescence indicator green 254 nm (F254) using vapours of iodide and/or UV light as a visualizing agent, respectively.
Preparative separations were carried out by: (i) column chromatography using Merck silica gel 60 (230–400 mesh), with grain size 40–63 μm or by (ii) PLC PSC-Fertigplatten Kieselgel 60 F254 (20 × 20 cm with 2 mm thickness layer) glass plates purchased from Merck, (Darmstadt, Germany).
The gas chromatography (GC) analyses were performed with an Agilent Technologies 6890N instrument (Santa Clara, CA, USA) equipped with a flame ionization detector (FID) and fitted with HP-50+ (30 m) semi-polar column (50% phenyl–50% methylpolysiloxane); the GC injector was maintained at 250 °C; Helium (2 mL/min) was used as carrier gas; retention times (
tR) are given in minutes under these conditions; column temperature programs are given in
Table S3 appended in Supplementary Materials.
The enantiomeric excesses (% ee) of optically active compounds were determined by high performance liquid chromatography (HPLC) analyses performed on Shimadzu CTO-10ASV chromatograph (Shimadzu Corporation, Japan) equipped with STD-20A UV detector and Chiralpak AD-H, Chiralcel OD-H or Chiralcel OJ-H (4.6 mm × 250 mm, coated on 5 µm silica gel grain size) chiral columns (Daicel Chemical Industries Ltd., Japan) equipped with dedicated pre-columns (4 mm × 10 mm, 5 µm) using mixtures of
n-hexane/2-PrOH or
n-hexane/
tert-ButOH/Et
3N as the respective mobile phases in the appropriate ratios; the HPLC analyses were executed in an isocratic and isothermal (30 °C) manner; flow (
f) is given in mL/min; racemic compounds were used as standards; HPLC conditions and retention times (
tR) are given in
Table S4 appended in Supplementary Materials.
UV spectra were measured with Varian Cary 3 UV-Visible Spectrophotometer (Varian, Inc., Palo Alto, CA, USA).
Optical rotations ([
α]) were measured with a PolAAr 32 polarimeter in a 2 dm long cuvette using the sodium D line (589 nm) at 22 °C or 27.5 °C, respectively; [α]
D are given in units of: deg dm
−1 cm
3 g
−1; the concentration
c is in g/100 mL (for details, see
Table S2 appended in Supplementary Materials).
1H NMR and
13C NMR spectra were recorded on a Varian Mercury 400BB spectrometer (Varian, Inc., Palo Alto, CA, USA) operating at 400 MHz for
1H and 100 MHz for
13C nuclei (for titled product
10 1H NMR (500 MHz),
13C NMR (126 MHz),
13C DEPT-135 NMR, and 2D NMR (HSQC) were recorded on Spektrometr Varian NMR System 500 MHz (Varian, Inc., USA)); chemical shifts (
δ) are given in parts per million (ppm) on the delta scale related to the solvent peak used as reference value; signal multiplicity assignment: s, singlet; d, doublet; t, triplet; q, quartet; m, multiplet; coupling constant (
J) are given in hertz (Hz); All samples were recorded as solutions in fully deuterated chloroform (CDCl
3), methanol (CD
3OD) or acetonitrile (CD
3CN), respectively. All NMR reports for
Supplementary Materials document were created by ACD/NMR Processor Academic Edition 12.0. (Freeware software provided by ACD/Labs (Advanced Chemistry Development, Inc. Toronto, Canada) and show only the delta range where signals were present.
Mass spectrometry (MS) was recorded on a Micro-mass ESI Q-TOF spectrometer with an ESI ion source (70 eV ionization) and a linear ion trap analyzer; all samples were prepared by dilution of MeOH (0.5 mL) and additives of mixtures of CH3CN/MeOH/H2O (50:25:25, v/v/v) + 0.5% formic acid (HCO2H) each.
GC-MS analysis was performed using an Agilent HP-6890 N gas chromatography apparatus coupled to a 5973 N quadrupole mass selective detector (Agilent Technologies, Palo Alto, CA, USA); chromatographic separations were carried out on non-polar RESTEK Rxi-1ms fused-silica capillary column (30 m × 0.25 mm) coated with 100% dimethylpolysiloxane (film thickness 0.25 mm) as a stationary phase; helium (purity 99.999%) was employed as carrier gas at a constant column flow-rate of 1.0 mL min–1; Injection mode: spitless at a temperature of 250 °C; column temperature program: sample was injected at an initial temperature of 100 °C, held for 1 min; ramped at 10 °C min–1 up to 320 °C, and held for 1 h; the mass spectrometer was operated in electron ionization mode (EI) at 70 eV, and a mass scan range from m/z = 40 to 400; ion source 280 °C; ion source vacuum 10–5 Torr.
Fourier Transform Infrared spectra (FT-IR) spectra of neat samples were recorded on a Perkin Elmer System 2000 FTIR Spectrometer (PerkinElmer, Inc. Waltham, MA, USA) equipped with a Pike Technologies GladiATR attenuated total reflectance (ATR) accessory with a monolithic diamond crystal stage and a pressure clamp; FT-IR spectra were recorded in transmittance mode in the 300–4000 cm–1 range, in ambient air at room temperature, with 2 cm–1 resolution, 0.5 cm–1 interval and accumulation of 32 scans; the unit is given in %T.
Molecular docking studies to establish favorable ligand binding geometries for the studied opioid analgesics and their affinity toward opioid receptors were carried out on a four CPUs-based desktop PC-computer equipped with AMD Phenom™ II X4 965 Processor 3.40 GHz and 32 GB of RAM on a Microsoft Windows 10 Professional 64-bit operating system (for details,
Section 3.1).
X-ray diffraction (XRD) analysis of the selected crystals were measured with mirror monochromated CuKα radiation on an Oxford Diffraction κ-CCD Gemini A Ultra diffractometer (for details, see
Section 3.18).
3.1. Molecular Docking
Molecular docking calculations were performed with AutoDock Vina v. 1.1.2. program (
https://vina.scripps.edu/, accessed on 5 September 2022) [
43] using the standard docking protocol described in our recent studies [
65,
66]. All ligands were prepared with ChemAxon MarvinSketch v. 14.9.1.0 (
https://chemaxon.com/marvin, accessed on 5 September 2022), optimized in terms of geometry in Avogadro v. 1.2.0. (
https://avogadro.cc/, accessed on 5 September 2022), and saved as .mol2 files. Macromolecule target crystal structures, including
µ-type opioid receptor (
µ-OR; PDB ID: 4DKL [
40], 2.80 Å resolution),
δ-type opioid receptor (
δ-OR; PDB ID: 4EJ4 [
41], 3.40 Å resolution), and
κ-type opioid receptor (
κ-OR; PDB ID: 4DJH [
42], 2.90 Å resolution), were taken from the RCSB Protein Data Bank (
https://www.rcsb.org/, accessed on 5 September 2022). All non-protein molecules (i.e., ligands and crystal waters) were removed, the polar hydrogens were then added, and Gesteiger charges were calculated using AutoDock tools v. 1.5.6. to get the appropriate file in .pdbqt format. Next, AutoGrid was used to find an appropriate grid box size in terms of
x,
y,
z coordinates with the final size space dimension set as follows:
x = 60 Å,
y = 60 Å,
z = 60 Å, and a grid spacing of 0.375 Å. Dockings were performed with an exhaustiveness level of 48 concerning global search. For each ligand molecule, 100 independent runs were performed using the Lamarckian Genetic Algorithm (GA) with at most 106 energy evaluations and a maximum number of generations of >27,000 Å
3 (the search space volume). The rest of the docking parameters, including the remaining Lamarckian GA parameters, were set as default using the standard values for genetic Vina algorithms (the posed dockings were below 5.00 Å rmsd). The docking modes of each ligand were clustered and ranked based on a mutual ligand-protein affinity expressed as absolute free binding energies (Δ
Gcalc (kcal/mol)) as well as the rmsd-values in both modes regarding rmsd lower bound (l.b.) and rmsd upper bound (u.b.), respectively. The receptor-ligand interactions were visualized using PyMOL Molecular Graphics System software v. 1.3, Schrödinger, LLC (
https://pymol.org/2/, accessed on 5 September 2022). The validation of the docking protocol was achieved by ensuring that the database ligands (i.e., methyl 4-{[(5β,6α)-17-(cyclopropylmethyl)-3,14-dihydroxy-4,5-epoxymorphinan-6-yl]amino}-4-oxobutanoate (BFO, in the case of 4DKL), (4b
S,8
R,8a
S,14b
R)-7-(cyclopropylmethyl)-5,6,7,8,14,14b-hexahydro-4,8-methano [
1]benzofuro [2,3-a]pyrido [4,3-b]carbazole-1,8a(9
H)-diol (naltrindole, in the case of 4EJ4), and (3
R)-7-hydroxy-
N-{(2
S)-1-[(3
R,4
R)-4-(3-hydroxyphenyl)-3,4-dimethylpiperidin-1-yl]-3-methylbutan-2-yl}-1,2,3,4-tetrahydroisoquinoline-3-carboxamide (JDTic, in the case of 4DJH)) could be re-docked to the respective OR under the established parameters, resulting in the same accommodation as in the co-crystallized complexes. For docking scoring, see
Table S5 appended in Supplementary Materials.
3.2. General Procedure for the Synthesis of 1-(Morpholin-4-yl)propan-2-ol rac-3
To a solution of propylene oxide (rac-2, 20 g, 0.34 mol) in H2O (160 mL), morpholine (1, 36 g, 0.41 mol) was added in one portion at the temperature of NaCl-ice-bath (0–5 °C), and then warmed slowly to room temperature (ca. 25 °C) under vigorous stirring for 24 h. Next, H2O (100 mL) was added, and the aqueous mixture was extracted with Et2O (3 × 200 mL) and next EtOAc (2 × 200 mL), respectively. The collected organic phase was dried over anhydrous Na2SO4, and after filtering off the drying agent, the solvents were removed under reduced pressure to give the crude reaction mixture, which was purified by short-pad column chromatography on silica gel using a mixture of CHCl3/MeOH (80:20, v/v) as an eluent yielding desired rac-3 (34.2 g, 68% yield) as a colorless liquid. Rf (CHCl3/MeOH; 80:20, v/v) 0.82 or Rf (CHCl3/MeOH; 95:5, v/v) 0.38; 1H NMR (CDCl3, 400 MHz) δ: 1.08 (d, J = 6.2 Hz, 3H, CH3), 2.14–2.41 (m, 4H, CH2N(CH2)CH2), 2.54–2.68 (m, 2H, NCH2CH), 3.40 (s, 1H, OH), 3.60–3.72 (m, 4H, CH2OCH2), 3.75–3.85 (m, 1H, CH); 13C NMR (CDCl3, 100 MHz) δ: 19.9 (CH3), 53.5 (CH2N(CH2)CH2), 61.9 (NCH2CH), 66.0 (CH), 66.8 (CH2OCH2); MS (ESI) m/z [M+H]+ calcd for C7H16NO2+ 146.1181, found 146.1169; FT-IR (neat) νmax (cm−1): 3434, 2964, 2932, 2856, 2810, 1735, 1455, 1374, 1324, 1295, 1271, 1241, 1208, 1140, 1114, 1069, 1011, 941, 910, 864, 844, 798, 752, 631, 495; UV/VIS: λmax = 208 nm (EtOH); GC (80–260 (10 °C/min)): tR = 4.43 min or (120–260 (10 °C/min)): tR = 2.20 min; HPLC (n-hexane/EtOH (90:10, v/v); f = 0.6 mL/min; λ = 208 nm; T = 30 °C, Chiralpak AD-H): tR = 14.611 min (R-isomer) and 16.213 min (S-isomer).
3.3. General Procedure for the Synthesis of 1-(Morpholin-4-yl)propan-2-yl acetate rac-4a
The solution of racemic 1-(morpholin-4-yl)propan-2-ol (rac-3, 1 g, 6.89 mmol) in dry CH2Cl2 (15 mL) was cooled to 0–5 °C and acetic anhydride (Ac2O, 844 mg, 8.26 mmol), Et3N (2.09 g, 20.66 mmol, 2.5 mL) and DMAP (15 mg) were added. The reaction mixture was stirred at room temperature (ca. 25 °C) overnight, then quenched with H2O (15 mL), and then with saturated NaHCO3 solution (15 mL). The combined aqueous phase was extracted with Et2O (3 × 15 mL). The organic layer was additionally washed with brine (25 mL) and dried over anhydrous Na2SO4. After filtering off the drying agent and the solvent evaporation under vacuum, the crude product was purified by column chromatography on silica gel using a gradient of CHCl3/MeOH (95:5, 90:10, 80:20, v/v) mixture as an eluent yielding rac-4a (1.06 g, 82% yield) as yellowish oil. Rf (CHCl3/MeOH 95:5, v/v) 0.64; 1H NMR (CDCl3, 400 MHz) δ: 1.20 (d, J = 6.3 Hz, 3H, CH3CH), 2.01 (s, 3H, CH3C=O), 2.25–2.55 (m, 6H, CH2N(CH2)CH2 and NCH2CH), 3.64 (t, J = 4.6 Hz, 4H, CH2OCH2), 5.01–5.12 (m, 1 H, CH); 13C NMR (CDCl3, 100 MHz) δ: 18.4 (CH3CH), 21.3 (CH3C=O), 53.9 (2C, CH2N(CH2)CH2), 63.3 (CH), 66.9 (2C, CH2OCH2), 67.4 (NCH2CH), 170.5 (C=O); MS (ESI) m/z [M+H]+ calcd for C9H18NO3+ 188.1287, found 188.0999; FT-IR (neat) νmax (cm−1): 2961, 2935, 2856, 2809, 1732, 1455, 1371, 1297, 1276, 1236, 1154, 1116, 1060, 1013, 957, 932, 901, 864, 827, 797, 630, 607, 484; UV/VIS: λmax = 208 nm (EtOH); GC (80–260 (10 °C/min)): tR = 6.39 min or (120–260 (10 °C/min)): tR = 3.28 min.
3.4. General Procedure for the Synthesis of 1-(Morpholin-4-yl)propan-2-yl butanoate rac-4b
To a solution of racemic 1-(morpholin-4-yl)propan-2-ol (rac-3, 1 g, 6.89 mmol) in dry CH2Cl2 (15 mL), Et3N (767 mg, 7.58 mmol, 0.92 mL), butanoyl chloride (807 mg, 7.58 mmol) and DMAP (20 mg, 0.16 mmol) were added. The reaction mixture was stirred at room temperature (ca. 25 °C) overnight, and then the content of the flask was quenched with H2O (15 mL) and then with saturated NaHCO3 solution (15 mL). The combined aqueous phase was extracted with Et2O (15 mL) and CH2Cl2 (2 × 15 mL), respectively. The combined organic extracts were washed with a saturated solution of NaHCO3 (15 mL) and brine (15 mL). After drying the organic phase over Na2SO4, filtration of the drying agent under vacuum, and solvent evaporation on a rotatory evaporator, the crude product was purified by column chromatography on silica gel using sole EtOAc (100%) as the eluent, thus yielding rac-4b (620 mg, 42% yield) as yellowish oil. Rf (EtOAc, 100%) 0.56; 1H NMR (CDCl3, 400 MHz) δ: 0.93 (t, J = 8.0 Hz, 3H, CH3CH2), 1.19 (d, J = 8.0 Hz, 3H, CH3CH), 1.62 (sxt, J = 8.0 Hz, 2H, CH3CH2), 2.20–2.26 (m, 2H, CH2C=O), 2.27–2.55 (m, 6H, CH2N(CH2)CH2 and NCH2CH), 3.63 (t, J = 4.6 Hz, 4H, CH2OCH2), 5.03–5.14 (m, 1H, CH); 13C NMR (CDCl3, 100 MHz) δ: 13.6 (CH3CH2), 18.4 (CH3CH2), 18.5 (CH3CH), 36.5 (CH2C=O), 53.9 (2C, CH2N(CH2)CH2), 63.4 (CH), 66.9 (2C, CH2OCH2), 67.0 (NCH2CH), 173.1 (C=O); FT-IR (neat) νmax (cm−1): 2963, 2935, 2854, 2812, 1730, 1455, 1377, 1296, 1276, 1252, 1183, 1117, 1059, 1014, 952, 933, 904, 864, 798, 631, 484; UV/VIS: λmax = 202 nm (EtOH); MS (ESI) m/z [M+H]+ calcd for C11H22NO3+ 216.1600, found 216.1278; GC (120–260 (10 °C/min)): tR = 4.98 min.
3.5. General Procedure for the Synthesis of 1-(Morpholin-4-yl)propan-2-yl decanoate rac-4c
To a solution of racemic 1-(morpholin-4-yl)propan-2-ol (rac-3, 1 g, 3.89 mmol) in dry CH2Cl2 (15 mL), Et3N (433 mg, 4.27 mmol, 0.52 mL), decanoyl chloride (815 mg, 4.27 mmol) and DMAP (20 mg, 0.16 mmol) were added. The combined aqueous phase was extracted with Et2O (15 mL) and CH2Cl2 (2 × 15 mL), respectively. The combined organic extracts were washed with a saturated solution of NaHCO3 (15 mL), brine (15 mL), and dried over Na2SO4. After filtration and solvent evaporation under reduced pressure, the crude product was purified by column chromatography on silica gel using sole EtOAc (100%) as the eluent to afford rac-4c (731 mg, 63% yield) as yellowish oil. Rf (EtOAc, 100%) 0.69; 1H NMR (CDCl3, 400 MHz) δ: 0.84 (t, J = 7.0 Hz, 3H, CH3CH2), 1.18 (d, J = 6.5 Hz, 3H, CH3CH), 1.20–1.34 (m, 12H, CH2), 1.57–1.67 (m, 2H, CH2CH2C=O), 2.20–2.55 (m, 8H, CH2N(CH2)CH2 and NCH2CH and CH2C=O), 3.63 (t, J = 4.63 Hz, 4H, CH2OCH2), 5.03–5.15 (m, 1H, CH); 13C NMR (CDCl3, 100 MHz) δ: 14.0 (CH3CH2), 18.4 (CH3CH), 22.6 (CH2), 25.0 (CH2CH2C=O), 29.0 (CH2), 29.2 (CH2), 29.2 (CH2), 29.4 (CH2), 31.8 (CH2), 34.6 (CH2C=O), 53.9 (2C, CH2N(CH2)CH2), 63.4 (CH), 66.9 (2C, CH2OCH2), 67.0 (NCH2CH), 173.2 (C=O); MS (ESI) m/z [M+H]+ calcd for C17H34NO3+ 300.2539, found 300.2323; FT-IR (neat) νmax (cm−1): 2956, 2924, 2854, 1735, 1455, 1377, 1296, 1276, 1246, 1173, 1118, 1062, 1014, 902, 865, 798, 722, 631, 481; UV/VIS: λmax = 202 nm (EtOH); GC (120–260 (10 °C/min)): tR = 11.15 min.
3.6. General Procedure for Kinetic Resolution of rac-3–Enzyme Screening
To the solution of racemic 1-(morpholin-4-yl)propan-2-ol (
rac-
3, 100 mg, 0.69 mmol) in MTBE (1 mL) the suspension of the appropriate lipase (20 mg, 20%
w/
w (catalyst/substrate
rac-
3)) in vinyl acetate (948 mg, 11 mmol, 1 mL) and added in one portion. The reaction mixture was stirred (500 rpm, IKA RCT basic) in a thermo-stated glass vial (
V = 4 mL) at 25 °C. Aliquots were regularly checked by gas chromatography (GC), and after the achievement of the required conversion, the enzyme preparation was removed by filtration and washed with portions of MTBE (10 mL) and MeOH (5 mL), respectively. The excess vinyl acetate and the volatile solvents were evaporated under reduced pressure. The crude residue was purified by column chromatography on silica gel using a mixture of CHCl
3/MeOH (95:5,
v/
v) as an eluent to afford enantiomerically enriched alcohol (
S)-(+)-
3 and acetate (
R)-(–)-
4a, respectively. To determine the ee-value of the ester, (
R)-(–)-
4a was subjected to basic methanolysis in the manner described below (for details, see
Section 3.11). For HPLC analysis, the samples were prepared by dilution with
n-hexane-2-PrOH (1.5 mL, 3:1,
v/
v) and filtered before injection. For additional data, see
Table 1.
3.7. General Procedure for Kinetic Resolution of rac-3–Solvent Screening
The reaction mixture containing
rac-
3 (100 mg, 0.69 mmol), Chirazyme L-2, C-2 (10 mg, 10%
w/
w (catalyst/substrate
rac-
3)), vinyl acetate (948 mg, 11 mmol, 1 mL), and the appropriate organic solvent (1 mL) was stirred (500 rpm, IKA RCT basic) in thermo-stated glass vial (
V = 4 mL) at 25 °C. The rest of the procedure was essentially the same as in the previous section (for details, see
Section 3.6). For details, see
Table 2.
3.8. General Procedure for Kinetic Resolution of rac-3–Acyl Donor Screening
The reaction mixture containing
rac-
3 (100 mg, 0.69 mmol), Chirazyme L-2, C-2 (20 mg, 20%
w/
w (catalyst/substrate
rac-
3)), MTBE (1 mL), and the respective acyl donor (1.38 mmol, 2 equiv) (i.e., vinyl acetate (119 mg, 127 μL) or vinyl butanoate (157 mg, 169 μL) or vinyl decanoate (273 mg, 293 μL)) was stirred (500 rpm, IKA RCT basic) in thermo-stated glass vial (
V = 4 mL) at 25 °C. The rest of the procedure was essentially the same as in the previous sections (for details, see
Section 3.6). For details, see
Table 3.
3.9. General Procedure for Gram-Scale Kinetic Resolution of rac-3
Racemic alcohol
rac-
3 (1 g, 6.88 mmol) was dissolved in MTBE (10 mL). Afterward, the suspension of the corresponding lipase (200 mg, 20%
w/
w (catalyst/substrate
rac-
3)) in vinyl acetate (1.19 g, 13.77 mol, 1.27 mL) was added in one portion. The reaction mixture was stirred (500 rpm, IKA RCT basic) in a round-bottomed flask (
V = 25 mL) at 25 °C for 16 h (in the case of Chirazyme L-2, C-2) and for 144 h (in the case of Amano PS-Immobead 150). Next, the biocatalyst was removed by filtration, and the filtrate cake was washed with MTBE (20 mL) and MeOH (10 mL), respectively. The volatile compounds were evaporated from the permeate under reduced pressure, and the residue was purified by column chromatography on SiO
2 using mixture of CHCl
3/MeOH (95:5,
v/
v) to afford enantiomerically enriched (
S)-(+)-1-(morpholin-4-yl)propan-2-ol ((
S)-(+)-
3, 340 mg, 34% yield, >99% ee, [α]
D27.5 = +50.40 (
c 1.3, CHCl
3) in the case of Chirazyme L-2, C-2 or 623 mg, 62% yield, 49% ee in the case of Amano PS-Immobead 150) and (
R)-(–)-1-(morpholin-4-yl)propan-2-yl acetate ((
R)-(–)-
4a, 521 mg, 40% yield, 75% ee in the case of Chirazyme L-2, C-2 or 364 mg, 28% yield, 99% ee, [α]
D27.5 = –4.66 (
c 1.2, CHCl
3) in the case of Amano PS-Immobead 150). The optically active ester (
R)-(–)-
4a was hydrolyzed by means of NaOH (1.1 equiv) in MeOH (3.5 mL) to give corresponding alcohol (
R)-(–)-
3 (for details, see
Section 3.11). The details concerning the results of preparative-scale EKR of
rac-
3 are collected in
Table 4. The physical, spectroscopic, and analytical data are identical as for the racemic standard compounds.
3.10. General Procedure for Multigram-Scale Kinetic Resolution of rac-3
Racemic 1-(morpholin-4-yl)propan-2-ol (
rac-
3, 10 g, 68.9 mmol) was dissolved in MTBE (100 mL). Next, the suspension of Chirazyme L-2, C-2 [2 g, 20%
w/
w (catalyst/substrate
rac-
3)] in vinyl acetate (11.89 g, 1.38 mol, 12.72 mL) was added in one portion. The resulting mixture was stirred (500 rpm, IKA RCT basic) in a round-bottomed flask (500 mL) equipped with a magnetic stir bar (2 cm × 5 mm, 2 g) for 27 h at 25 °C. After enzyme removal and its subsequent washing with portions of MTBE (150 mL) and MeOH (50 mL), the filtrate was evaporated to dryness, and the remaining oil was subjected to column chromatography (20 g of SiO
2 was applied for 1 g of the crude reaction mixture) using gradient of CHCl
3/MeOH (95:5, 90:10,
v/
v) mixture as an eluent to yield enantiomerically enriched alcohol (
S)-(+)-
3 (3.64 g, 36% yield, >99% ee, [α]
D27.5 = +67.38 (
c 1.18, CHCl
3)) and acetate (
R)-(–)-
4a (4.85 g, 85% yield, 79% ee). The optically active ester (
R)-(–)-
4a was hydrolyzed by means of NaOH (1.1 equiv) in MeOH (3.5 mL) to give corresponding alcohol (
R)-(–)-
3 (for details, see
Section 3.11). The details concerning the results of preparative-scale EKR of
rac-
3 are collected in
Table 4. The physical, spectroscopic, and analytical data are identical to the standard racemic compounds.
3.11. General Procedure for Base-Mediated Methanolysis of (R)-(-)-1-(Morpholin-4-yl)propan-2-yl acetate (R)-(–)-4a
A solution of enantiomerically enriched acetate (R)-(–)-4a (3 g, 16 mmol, 99% ee) dissolved in MeOH (25 mL) was treated with a solution of NaOH (705 mg, 17.6 mmol) in MeOH (75 mL). The resulting mixture was stirred at room temperature (ca. 25 °C) for 30 min until complete consumption of the starting material (according to TLC). Then, the organic solvent was evaporated under reduced pressure, and the resulting solution was suspended in H2O (100 mL). The aqueous solution was subsequently extracted with CH2Cl2 (3 × 150 mL), Et2O (3 × 100 mL), and EtOAc (1 × 100 mL). The organic layers were combined, partially condensed on a rotary evaporator, and dried over anhydrous Mg2SO4. After filtering off the drying agent and solvent evaporation in vacuo, the crude reaction mixture was purified by column chromatography on silica gel eluting with a gradient of CHCl3/MeOH (95:5, 90:10, 80:20, v/v) mixture to yield (R)-(–)-3 (1.54 g; 66% yield; 98% ee, [α]D22 = –73.03 (c 1.8, CHCl3)).
3.12. General Procedure for the Determination of the Absolute Configuration of (S)-(+)-1-(Morpholin-4-yl)propan-2-ol (S)-(+)-3 Realized Via Esterification of (S)-(+)-3 with Enantiomers of α-Methoxy-α-phenylacetic Acid (R)-MPA or (S)-MPA
A catalytic amount of DMAP (5 mg) was added to a solution of enantiopure (S)-(+)-1-(morpholin-4-yl)propan-2-ol ((S)-(+)-3, 87 mg, 0.60 mmol, >99% ee), (R)- or (S)-α-methoxy-α-phenylacetic acid (100 mg, 0.60 mmol) as appropriate, and N,N’-dicyclohexylcarbodiimide (DCC, 148 mg, 0.72 mmol) in anhydrous CH2Cl2 (4 mL). After 72 h of stirring the reaction mixture at room temperature (ca. 25 °C), precipitated dicyclohexylurea was removed by filtration, and then the urea cake was rinsed with PhCH3 (3 × 10 mL). The combined organic solutions were washed with cold 1M HCl (2 × 10 mL), saturated NaHCO3 (2 × 10 mL), and brine (1 × 10 mL). Next, the organic layer was dried over MgSO4, filtered, evaporated to dryness, and the crude product as a yellow oil was diluted with a mixture of CHCl3/MeOH (2 mL, 1:1, v/v) and purified by preparative thin-layer chromatography using a mixture of CHCl3/MeOH (95:5, v/v) as an eluent. Appropriately, the separated fraction was removed from the glass plate with SiO2 gel, the silica matrix was ground, and the powder was placed in a round-bottomed flask and stirred with CHCl3/MeOH (100 mL, 1:1, v/v) for over 1 h. Finally, silica gel was filtered off, rinsed with MeOH (2 × 50 mL), and the resulting filtrate was evaporated to dryness to afford esters of (S)-(+)-3 with (R)-MPA and (S)-MPA, respectively.
(2S)-1-(Morpholin-4-yl)propan-2-yl (2R)-methoxy(phenyl)acetate (ester of (S)-(+)-3 and (R)-MPA, (S)-(+)-3-(R)-MPA). Yellowish semisolid; 85% yield; Rf (CHCl3/MeOH 95:5, v/v) 0.82; 1H NMR (CDCl3, 400 MHz) δ: 1.11 (d, J = 6.3 Hz, 3H, CH3), 2.24–2.34 (m, 3H, CH2N(CH2)CH2), 2.40–2.53 (m, 3H, NCH2CH and partially CH2N(CH2)CH2), 3.41 (s, 3H, OCH3), 3.54 (t, J = 4.6 Hz, 4H, CH2OCH2), 4.73 (s, 1H, CHC=O), 5.09–5.21 (m, 1H, CH3CH(O)CH2), 7.26–7.35 (m, 3H, PhH), 7.40–7.46 (m, 2H, PhH); 13C NMR (CDCl3, 100 MHz) δ: 17.9 (CH3), 53.8 (2C, CH2N(CH2)CH2), 57.3 (OCH3), 63.2 (CH3CH(O)CH2), 66.8 (2C, CH2OCH2), 68.2 (NCH2CH), 82.8 (CHC=O), 127.0 (2C, o-Ph), 128.3 (2C, m-Ph), 128.4 (p-Ph), 136.2 (PhCH), 170.1 (C=O); MS (ESI) m/z [M+H]+ calcd for C16H24NO4+ 294.1705, found 294.1561.
(2S)-1-(Morpholin-4-yl)propan-2-yl (2S)-methoxy(phenyl)acetate (ester of (S)-(+)-3 and (S)-MPA, (S)-(+)-3-(S)-MPA). Yellowish semisolid; 94% yield; Rf (CHCl3/MeOH 95:5, v/v) 0.82; 1H NMR (CDCl3, 400 MHz) δ: 1.18 (d, J = 6.6 Hz, 3H, CH3), 1.99–2.09 (m, 2H, NCH2CH), 2.16–2.36 (m, 4H, CH2N(CH2)CH2), 3.33–3.43 (m, 7H, OCH3 and CH2OCH2), 4.69 (s, 1H, CHC=O), 5.12 (ddd, J = 8.5, 6.3, 3.5 Hz, 1H, CH3CH(O)CH2), 7.23–7.35 (m, 3H, PhH), 7.40–7.43 (m, 2H, PhH); 13C NMR (CDCl3, 100 MHz) δ: 18.2 (CH3), 53.5 (2C, CH2N(CH2)CH2), 57.1 (OCH3), 63.1 (CH3CH(O)CH2), 66.6 (2C, CH2OCH2), 68.4 (NCH2CH), 82.4 (CHC=O), 127.2 (2C, o-Ph), 128.3 (2C, m-Ph), 128.4 (p-Ph), 136.3 (PhCH), 169.9 (C=O); MS (ESI) m/z [M+H]+ calcd for C16H24NO4+ 294.1705, found 294.1561.
3.13. General Procedure for the Synthesis of 4-[(2R)-(–)-2-Chloropropyl]morpholine (R)-(–)-5 or 4-[(2S)-(+)-2-Chloropropyl]morpholine (S)-(+)-5
Method A: To a stirred solution of the respective optically active alcohol (
S)-(+)-
3 (99% ee) or (
R)-(–)-
3 (98% ee) (10 g, 68.87 mmol) in CHCl
3 (100 mL), a solution of SOCl
2 (16.4 g, 0.14 mol, 10 mL) in CHCl
3 (50 mL) was added dropwise at 0–5 °C under nitrogen atmosphere within a period of 1 h. Next, the resultant reaction mixture was stirred for 2 h at room temperature (ca. 25 °C) until hydrochloride of morpholino derivative precipitated as a heavy-pasty white solid. Then, the solution was refluxed (the solid has been dissolved meantime) until completion of starting material (followed by TLC, approx. 2 h) and stopped by quenching the content of the flask with saturated NaHCO
3 (2 × 100 mL). The water phase was extracted with CHCl
3 (3 × 100 mL), the combined organic layer was dried over anhydrous MgSO
4, the drying agent was filtered off, and the permeate was concentrated in a vacuum. The crude reaction mixture was purified on silica gel column chromatography eluting with a mixture of CHCl
3/MeOH (95:5,
v/
v) to afford (
R)-(–)-
5 (8.05 g, 71% yield, >99% ee, [α]
D22 = –19.87 (
c 2.3, CHCl
3); obtained from (
S)-(+)-
3] or (
S)-(+)-
5 [7.78 g, 69%, 98% ee, [α]
D22 = +23.00 (
c 1.3, CHCl
3); obtained from (
R)-(–)-
3) as pale amber oil, respectively. The enantiomeric excesses (% ee) of (
R)-(–)-
5 and (
S)-(+)-
5 were determined after thioetherification of the respective chloro-derivative with sodium thiophenolate (for details, see
Section 3.14).
Method B: A solution of (
S)-(+)-
5 (5 g, 34.4 mmol) and CCl
4 (7.95 g, 51.6 mmol) in dry CH
2Cl
2 (30 mL) was cooled to 0–5 °C. Next, triphenylphosphine (Ph
3P, 13.5 g, 51.6 mmol) was added portion-wise via a powder funnel over 30 min with vigorous stirring. Upon addition of the phosphine, the colorless solution turned a pale brown color and was stirred for an additional 6 h at room temperature (ca. 25 °C). Next, EtOAc (50 mL) was added to the remaining mixture with vigorous stirring until the formation of white precipitate, which was filtered off, and washed with cold EtOAc (10 mL). The combined solutions were concentrated in a vacuum, and the remaining oil was subjected to silica gel column chromatography using a mixture of
n-hexane/EtOAc (50:50,
v/
v) to afford (
R)-(–)-
5 (3.2 g, 57% yield, >99% ee) as a yellowish oil. The enantiomeric excesses (% ee) of (
R)-(–)-
5 and (
S)-(+)-
5 were determined after thioetherification of chloro-derivatives with sodium thiophenolate (for details, see
Section 3.14).
4-[(2R)-(–)-2-Chloropropyl]morpholine [(R)-(–)-5] or 4-[(2S)-(+)-2-chloropropyl]morpholine ((S)-(+)-5). Rf (CHCl3/MeOH 95:5, v/v) 0.75 or Rf (n-hexane/EtOAc 50:50, v/v) 0.55; 1H NMR (CDCl3, 400 MHz) δ: 1.51 (d, J = 6.6 Hz, 3H, CH3), 2.42–2.55 (m, 5H, CH2N(CH2)CH2 and partially NCH2CH), 2.65 (dd, J = 13.0, 7.0 Hz, 1H, one of NCH2CH), 3.65–3.74 (m, 4H, CH2OCH2), 4.02–4.12 (m, 1H, CH); 13C NMR (CDCl3, 100 MHz) δ: 23.3 (CH3), 53.9 (2C, CH2N(CH2)CH2), 54.1 (CH), 66.8 (NCH2CH), 66.8 (2C, CH2OCH2); FT-IR (neat) νmax (cm−1): 2961, 2931, 2856, 2812, 1454, 1373, 1298, 1277, 1144, 1115, 1070, 1035, 1011, 934, 903, 864, 800, 684, 635, 622, 472; UV/VIS: λmax = 208 nm (EtOH); MS (ESI) m/z [M+H]+ calcd for C7H15ClNO+ 164.0842, found 164.0877; GC (80–260 (10 °C/min)): tR = 4.66.
3.14. General Procedure for the Synthesis of (R)- and (S)-4-[2-(Phenylsulfanyl)propyl]morpholine (R)-5–SPh and (S)-5–SPh
Clean sodium metal (281 mg, 12.22 mmol) was added portion-wise to absolute EtOH (5 mL) and stirred for 1 h at room temperature (ca. 25 °C). Next, a solution of thiophenol (1.35 g, 12.22 mmol) in anhydrous EtOH (2 mL) was added under an argon atmosphere, and the mixture was stirred for 30 min at room temperature (ca. 25 °C). Afterward, the respective optically active 4-(2-chloropropyl)morpholine ((R)-(–)-5 or (S)-(+)-5, 200 mg, 1.22 mmol) was added in one portion, and the reaction mixture was stirred for additional 12 h. The residue was treated with H2O (20 mL), and the aqueous phase was extracted with CH2Cl2 (3 × 25 mL). After drying the combined organic layer over anhydrous MgSO4 and evaporation of the volatiles under vacuum, the crude product was purified by column chromatography (SiO2) using a gradient of n-hexane/EtOAc (75:25, 50:50, v/v) mixture to afford desired optically active sulfide (R)-5–SPh (42 mg, 15% yield, 98% ee) or (S)-5–SPh (47 mg, 16% yield, >99% ee) as a pale-yellow oil.
(R)-4-[2-(Phenylsulfanyl)propyl]morpholine ((R)-5–SPh) or (S)-4-[2-(phenylsulfanyl)propyl]morpholine ((S)-5–SPh). Rf (n-hexane/EtOAc 50:50, v/v) 0.38; 1H NMR (CDCl3, 400 MHz) δ: 1.15 (d, J = 6.3 Hz, 3H, CH3), 2.47–2.60 (m, 4H, CH2N(CH2)CH2 and partially NCH2CH), 2.77–2.85 (m, 2H, NCH2CH), 3.14–3.26 (m, 1H, CH), 3.62–3.76 (m, 4H, CH2OCH2), 7.13–7.19 (m, 1H, Ph), 7.24–7.30 (m, 2H, Ph), 7.31–7.37 (m, 2H, Ph); 13C NMR (CDCl3, 100 MHz) δ: 14.2 (CH3), 37.5 (CH), 48.8 (CH2N(CH2)CH2), 58.9 (NCH2CH), 67.2 (2C, CH2OCH2), 125.7 (p-Ph), 128.8 (2C, Ph), 128.9 (2C, Ph), 137.1 (PhCH); UV/VIS: λmax = 254 nm (EtOH); MS (ESI) m/z [M+H]+ calcd for C13H20NOS+ 238.1266, found 238.1358; GC (80–260 (10 °C/min)): tR = 15.24; HPLC (n-hexane/tert-ButOH/Et3N (96.5:3.0:0.5, v/v/v); f = 1.0 mL/min; λ = 254 nm; T = 30 °C, Chiralcel OJ-H): tR = 19.417 min (R-isomer) and 20.940 min (S-isomer).
3.15. General Procedure for the Synthesis of Diphenylacetic Acid Chloride (8)
To a solution of diphenylacetic acid (
7, 10 g, 47.12 mmol) in benzene (25 mL) SOCl
2 (84 g, 0.71 mol, 51 mL) was added dropwise under a nitrogen atmosphere. The reaction mixture was refluxed with stirring for 6 h, then cooled to room temperature and stirred for an additional 24 h. The progress of the reaction was controlled using TLC and the mixtures of PhCH
3/EtOAc (50:10,
v/
v) or
n-hexane/EtOAc (70:10,
v/
v) as the eluent systems, respectively. Next, the excess of SOCl
2 and benzene was removed under vacuum to obtain desired acid chloride
8 (10.5 g, 97% yield) as a colorless oil, which solidified on standing. White solid; mp 49–50 °C (benzene) (Ref. [
67] 50.5–51.5 °C (no data));
Rf (PhCH
3/EtOAc 50:10,
v/
v) 0.76 or
Rf (
n-hexane/EtOAc 70:10,
v/
v) 0.60;
1H NMR (CDCl
3, 400 MHz)
δ: 5.53 (s, 1H, C
H), 7.24–7.62 (m, 10H, Ph);
13C NMR (CDCl
3, 100 MHz)
δ: 68.6 (
CH), 128.1 (2C,
p-Ph), 128.6 (4C,
m-Ph), 128.9 (4C,
o-Ph), 136.1 (2C,
PhCH), 173.4 (C=O).
3.16. General Procedure for the Synthesis of N-Diphenylacetyl-1-pyrrolidine (9)
A solution of diphenylacetyl chloride (
8, 10.5 g, 45.52 mmol) in 1,4-dioxane (40 mL) was added dropwise into an ice-bath cold solution of pyrrolidine (10 g, 0.14 mol, 11.6 mL) in 1,4-dioxane (30 mL) under argon. After the initial vigorous reaction had subsided, the mixture was stirred for 1 h at 50 °C, chilled to room temperature, and subsequently diluted with H
2O (50 mL). The progress of the reaction was controlled on TLC plates using mixtures of PhCH
3/EtOAc (50:10,
v/
v) and CHCl
3/MeOH (95:5,
v/
v) for confirmation, respectively. The precipitated crude amide was washed with H
2O (2 × 75 mL) and purified by recrystallization from a mixture of Et
2O/MeOH (100 mL; 50:50,
v/
v) to afford
9 (10.3 g, 85% yield) as white crystals. Mp 162–163 °C (Et
2O/MeOH) (Ref. [
68] 162–163 °C (Et
2O/MeOH));
Rf (PhCH
3/EtOAc 50:10,
v/
v) 0.22 or
Rf (CHCl
3/MeOH 95:5,
v/
v) 0.73;
1H NMR (CDCl
3, 400 MHz)
δ: 1.78–1.95 (m, 4H, C
H2C
H2) 3.45 (t,
J = 6.7 Hz, 2H, C
H2NCH
2), 3.55 (t,
J = 6.7 Hz, 2H, CH
2NC
H2), 5.09 (s, 1H, C
H), 7.21–7.37 (m, 10H, Ph);
13C NMR (CDCl
3, 100 MHz)
δ: 24.2 (
CH
2CH
2), 26.1 (CH
2CH
2), 46.1 (
CH
2NCH
2), 46.7 (CH
2N
CH
2), 56.4 (
CH), 126.8 (2C,
p-Ph), 128.4 (4C,
o-Ph), 128.9 (4C,
m-Ph), 139.4 (
PhCH), 170.0 (C=O); FT-IR (neat)
νmax (cm
−1): 2970, 2948, 2878, 1739, 1627, 1599, 1495, 1456, 1419, 1358, 1342, 1301, 1266, 1255, 1227, 1190, 1170, 1083, 1039, 917, 865, 758, 749, 725, 708, 695, 626, 562, 493, 474; U
V/
VIS: λ
max = 219 nm (EtOH); MS (ESI)
m/
z [M+H]
+ calcd for C
18H
20NO
+ 266.1545, found 266.1563; GC (150–260 (10 °C/min)):
tR = 14.83 min.
3.17. General Procedure for the Synthesis of 2-[(2R)-2-(Morpholin-4-yl)propoxy]-2,2-diphenyl-1-(pyrrolidin-1-yl)ethan-1-one ((R)-(–)-10) and 2-[(2S)-2-(Morpholin-4-yl)propoxy]-2,2-diphenyl-1-(pyrrolidin-1-yl)ethan-1-one ((S)-(+)-10)
To a solution of N-diphenylacetyl-1-pyrrolidine (9, 500 mg, 1.88 mmol) and N-benzyl-N,N,N-triethylammonium chloride (TEBA(Cl), 42 mg, 0.19 mmol) in dry DMSO (8 mL), a grounded NaOH (603 mg; 15.07 mmol) was added in gentle flow of molecular O2. The resulting mixture was stirred at room temperature for 15 min, and then a solution of chloro-derivative (R)-(–)-5 (400 mg, 2.45 mmol, >99% ee) in dry DMSO (2 mL) was added in one portion, and the resulting mixture was stirred vigorously with a mechanical stirrer for additional 4 h at 40 °C under oxygen provided from a balloon. The reaction was stopped by the addition of H2O (20 mL). After extraction of an aqueous phase with Et2O (6 × 30 mL), the combined organic layer was dried over anhydrous MgSO4, the drying agent was filtered off, and the excess solvent was removed under reduced pressure affording the crude product, which was subsequently purified by PLC using a gradient of n-hexane/acetone (30:10, 15:10, v/v). The appropriate fraction was removed, placed in the round-bottomed flask, suspended in the mixture of n-hexane/acetone (150 mL, 10:20, v/v), and vigorously stirred for 1 h at room temperature. Next, the silica gel was filtered off, washed with portions of n-hexane/acetone (2 × 50 mL, 1:1, v/v), and the permeate was concentrated under reduced pressure resulting in a yellowish semi-solid, which was subsequently dissolved in warm EtOAc (1 mL) and after careful addition of n-hexane (0.5 mL) was kept in the fridge for 2 days to afford (R)-(–)-10 (230 mg, 31% yield, 89% ee, [α]D22 = –22.6 (c 1.9, CHCl3)) as colorless crystals. The synthesis of optically active (S)-(+)-10 (150 mg, 20% yield, 87% ee, [α]D22 = +19.2 (c 1.8, CHCl3)) was carried out essentially by the same route using or (S)-(+)-5 (98% ee) as an alkylating agent.
2-[(2R)-2-(Morpholin-4-yl)propoxy]-2,2-diphenyl-1-(pyrrolidin-1-yl)ethan-1-one ((R)-(–)-10) or 2-[(2S)-2-(morpholin-4-yl)propoxy]-2,2-diphenyl-1-(pyrrolidin-1-yl)ethan-1-one ((S)-(+)-10). Mp 83–84 °C (n-hexane/EtOAc); Rf (n-hexane/acetone 30:10, v/v) 0.33 or Rf (n-hexane/acetone 15:10, v/v) 0.51 or Rf (CH2Cl2/MeOH 90:10, v/v) 0.69 or Rf (CHCl3/MeOH 90:10, v/v) 0.76; 1H NMR (CD3CN, 500 MHz) δ: 1.11 (d, J = 6.9 Hz, 3H, CH3), 1.55–1.79 (m, 4H, CH2CH2 in pyrrolidine), 2.44–2.64 (m, 4H, CH2NCH2 in morpholine), 2.84–2.95 (m, 1H, CH), 3.07–3.25 (m, 3H, CH2NCH2 in pyrrolidine and one of OCH2CH), 3.41–3.54 (m, 3H, CH2NCH2 in pyrrolidine and one of OCH2CH), 3.55–3.70 (m, 4H, CH2OCH2 in morpholine), 7.16–7.24 (m, 2H, Ph), 7.24–7.40 (m, 4H, Ph), 7.49–7.68 (m, 4H, Ph); 13C NMR (CD3CN, 126 MHz) δ: 13.4 (CH3), 24.0 (CH2CH2), 47.9 (CH2NCH2 in pyrrolidine), 48.3 (CH2NCH2 in pyrrolidine), 50.8 (CH2NCH2 in morpholine), 60.4 (CH), 67.7 (OCH2CH), 68.1 (CH2OCH2 in morpholine), 87.4 (C), 127.8 (Ph), 128.0 (Ph), 128.9 (Ph), 143.9 (PhC), 169.2 (C=O); 13C DEPT-135 NMR (CD3CN, 126 MHz) δ: 13.4 (CH3, +ve), 24.0 (CH2CH2, –ve), 47.9 (CH2NCH2 in pyrrolidine, –ve), 48.3 (CH2NCH2 in pyrrolidine, –ve), 50.8 (CH2NCH2 in morpholine, –ve), 60.4 (CH, +ve), 67.7 (OCH2CH), 68.1 (CH2OCH2 in morpholine, –ve), 127.8 (Ph, +ve), 128.0 (Ph, +ve), 128.9 (Ph, +ve) (+ve refers to positive phasing and –ve refers to negative phasing); FT-IR (neat) νmax (cm−1): 2966, 2875, 2813, 1631, 1491, 1449, 1406, 1332, 1289, 1268, 1185, 1164, 1116, 1068, 917, 875, 851, 727, 703, 645; UV/VIS: λmax = 222 nm (EtOH); MS (ESI) m/z [M+H]+ calcd for C25H33N2O3+ m/z: 409.2486, found 409.6588; GC-MS (EI, 70 eV) tR = 18.870 min, m/z (%): 236 (12.5), 165 (30), 128 (37.5), 100 (100), 56 (28), 42 (13); HPLC (n-hexane/2-PrOH (90:10, v/v); f = 0.8 mL/min; λ = 222 nm; T = 30 °C, Chiralcel OD-H): tR = 9.026 min (S-isomer) and 19.519 min (R-isomer).
3.18. XRD Analyses
3.18.1. Conditions for Crystal Growth of 2-[(2R)-2-(Morpholin-4-yl)propoxy]-2,2-diphenyl-1-(pyrrolidin-1-yl)ethan-1-one ((R)-(–)-10)
Colorless single crystal of sufficient quality for X-ray diffraction (XRD) analysis was prepared using standard vapor diffusion methodology. In this regard, (R)-(–)-10 (15 mg, 89% ee) was dissolved in EtOAc (1 mL) and transferred into an open-neck glass vial (V = 4mL) opened and placed in a bottle that contained n-hexane. The outer vessel was sealed, and the composed system was stored at room temperature for 10 days until monocrystals were grown.
3.18.2. Crystal Structure Determination of (R)-(–)-10
A colorless single crystal of (
R)-(–)-
10 (0.67 × 0.42 × 0.25 mm
3), suitable for X-ray diffraction analysis, was selected under the polarizing microscope, mounted in an inert oil, and transferred to the cold gas stream of the Oxford Diffraction
κ-CCD Gemini A Ultra diffractometer. Diffraction data were collected at 100.0(1) K with mirror monochromated Cu
Kα radiation. Cell refinement and data collection, as well as data reduction and analysis, were performed with the Crysalis
pro software [
69]. The absolute-structure of (
R)-(–)-
10 was solved with the Olex2 [
70] using the ShelXT [
71] structure solution program (Intrinsic Phasing) and refined with the SHELXL-2018/3 [
72] refinement package (Least Squares minimization). All non-hydrogen atoms were refined with anisotropic displacement parameters. Hydrogen atoms attached to carbon atoms were added to the structure model at geometrically idealized coordinates and refined as riding atoms with Uiso(H) = 1.2Ueq(CH and CH
2) or Uiso(H) = 1.5Ueq(CH
3). The absolute configuration for the compound molecule (
R) was successfully determined using anomalous dispersion effects. Flack parameter [
73] calculated from 3549 selected quotients (Parsons’ method) [
74] equals 0.03(3). Further analysis of the absolute structure assignment was performed using likelihood methods with PLATON [
75]. A total of 3677 Bijvoet pairs (coverage of 1.00) were included in the calculations. The resulting value of the Hooft parameter [
76] was 0.02(6), with a P3 probability for an inverted structure smaller than 1 × 10
−60. These results indicated that the absolute-structure has been correctly assigned.
3.18.3. Crystal Data for (R)-(–)-10
C
25H
32N
2O
3 (
M = 408.52 g/mol): monoclinic, space group
P2
1 (no. 4),
a = 11.46510(10) Å,
b = 9.10430(10) Å,
c = 21.3925(2) Å,
β = 98.3240(10)°,
V = 2209.46(4) Å
3,
Z = 4,
T = 100.0(1) K,
μ(Cu Kα) = 0.638 mm
−1,
Dcalc = 1.228 g/cm
3, 93508 reflections measured (7.794° ≤ 2Θ ≤ 134.06°), 7903 unique (
Rint = 0.0550,
Rsigma = 0.0184) which were used in all calculations. The final
R1 was 0.0354 (
I > 2
σ(I)) and
wR2 was 0.0929 (all data). For details concerning crystal data and structure refinement parameters for (
R)-(–)-
10, see
Table S6 appended in Supplementary Materials. CCDC-2202212 contains the supplementary crystallographic data for compound (
R)-(–)-
10. This can be obtained free of charge on application to CDC, 12 Union Road, Cambridge CB21EZ, UK (Fax: (+44)1223-336-033; email:
[email protected]).