Differential Expression of DUB Genes in Ovarian Cells Treated with Di-2-Ethylhexyl Phthalate
Abstract
1. Introduction
2. Results
2.1. Differential Expressions of DUBs by DEHP in Ovarian Cells
2.2. DEHP Exposure Influenced the mRNA Levels of Several DUB Genes in Ovarian Cells
2.3. Up-Regulation of USP49 Protein by DEHP in Ovarian Cells
3. Discussion
4. Materials and Methods
4.1. Cell Culture
4.2. RNA Extraction and cDNA Synthesis
4.3. Multiplex RT-PCR and qRT-PCR
4.4. Western Blot Analysis
4.5. Antibodies
4.6. Statistical Analysis
Supplementary Materials
Author Contributions
Funding
Acknowledgments
Conflicts of Interest
References
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Ovarian Cells | DEHP (di-2-ethylhexyl phthalate) |
---|---|
A | 0 μg/mL (0 mM) |
B | 1 μg/mL (2.77 mM) |
C | 10 μg/mL (27.7 mM) |
D | 100 μg/mL (277 mM) |
DUB Gene | Primer Sequence | Group | DUB Gene | Primer Sequence | Group |
---|---|---|---|---|---|
Ataxin3 | F: GTC CAA CAG ATG CAT CGA CCA A | G4 | USP12 | F: GAA CTC TGA GTC TGG TTA CAT CCT | G2 |
R: CGT CTA ACA TTC CTG AGC CAT C | R: GAG GAG CTG GTA TCT CTG ATT TCA | ||||
ATXN3L | F: TCA GAA GAA AGT GAT GAG TCT GG | G9 | USP13 | F: ACC CAG CTG GAC AAT GGA GTC A | G2 |
R: CTC TCA ATT GCT CTC GAA CTT G | R: CAG CTT GAT GTC ATT GTC CTG GA | ||||
BAP1 | F: TCC GTG ATC TGG GTC CTG TC | G11 | USP14 | F: TCA GTG TAT TCG TTC TGT GCC TGA | G2 |
R: TCC CCG TCT TCT CTC TGC TG | R: CTC GCA TCA TTT GTA TCC AAC ATT CA | ||||
BRCC3 | F: GAG TTC AGA GTA TGA GAG AAT CG | G4 | USP15 | F: AAA CCT CGC TCC GGA AAG GGG A | G2 |
R: CCT TTT CTT CTT GTT GTA ATT CCT G | R: CAG TTG GCA ACA GTA TGT AAT CCA A | ||||
COPS5 | F: GCA GTG GTG ATT GAT CCA ACA A | G5 | USP16 | F: AAA CTT TAG AAC CTG TGT GCA G | G3 |
R: AGA CCT GAC CAG TGG TAT AGT C | R: CCT GAG AAT TTC TGC CAC AGC C | ||||
COPS6 | F: AGG TGT TCA AGG AGC TGG AGT T | G5 | USP17 | F: GAG CAA CGC AAG GAG AGC TCA AG | G8 |
R: GGA AGA TCT GTG TGC TTG GTC A | R: AGG GTA CCT TCG ACT TTT CTG ACG | ||||
CYLD | F: GCC AAG AAA AAG TCA CTT CAC CC | G11 | USP18 | F: ATT GGA CAG ACC TGC CTT A | G3 |
R: TGC CTT TTT GCA GAA GGA ATC CT | R: AAG GAT TCC TTC ACC CGG ATC G | ||||
EIF3S3 | F: GTC CAA ACT CTT CAA ACC ACC A | G5 | USP19 | F: GTT CTT TCC TTC ATC GTC AGG GTC | G3 |
R: AGT GAA CTC CTT GAT GTT CTG G | R: AGT GGG AGT AGC CAA GAG ATC ATG | ||||
EIF3S5 | F: TCT GCC TGG TCC TGC TCT TCC A | G4 | USP20 | F: TGG GCT CCT CTT CCA AGT TCT | G11 |
R: TTG TCG ACA GTT CCC AAC AGG G | R: AGG TTT CAG GTC ATC GTC CTC T | ||||
JOSD1 | F: GTG AAT GTC ATT ATG GCA GCA C | G4 | USP21 | F: TGA CAA AGC CGG AAG TCC TGT A | G3 |
R: TCC TCC AAC TCT GAT GAG CCT C | R: AAA GGG CTT CAC AGG TGC CAG A | ||||
JOSD2 | F: GTG TCT ACT ACA ACC TGG ACT C | G4 | USP22 | F: ACC AAC CAA ACG GGA GCT TG | G11 |
R: ATG AAG TGC TGG CCT TTC CCA G | R: CCC AAG GTT GAT CAG CCC AC | ||||
MPND | F: CGG GCA GAC CTT CAA CTC AC | G12 | USP24 | F: CCG ACA GTT GTC CGT GTC TG | G12 |
R: CCC AGT GGT CTC CGA CTC TT | R: TCC GAA GCT GTA GGC ACG TA | ||||
OTUB1 | F: AGG AAC CTC AGC AGC AGA AGC A | G6 | USP26 | F: CAG CCA CCT GTG AGA CCT GGT AA | G8 |
R: GTC TTG CGG ATG TAC GAG TAC T | R: CTG ATA ACT CTC CGC AAG TAA G | ||||
OTUB2 | F: CAT TCT TCG GGA CCA TCC TGA A | G6 | USP27 | F: CTC CAG CTT TAC GAT CGG TTT AAG | G1 |
R: GTT CCC ATC CCC TTT GGT CTT | R: CCG AAA CAG CGA CGA CAT CTC AC | ||||
OTUD1 | F: ATG GGG CAG ATG CTG AAT GTG A | G6 | USP28 | F: GAG GCA GCC CCA ACT GAA TC | G11 |
R: TGC ACC AGT TGT CGT ACT CTG | R: TGC TCA GAT GAC AAG CAG CG | ||||
OTUD3 | F: GAA GAC GAC CTG AGA GAT GAA G | G7 | USP29 | F: GGG ATG ACT AAG CTG AAA GAA GCT | G10 |
R: CTG GGC TCA AGA TTC TCT TCT G | R: TTT CAA AGT TAA ACG CAG GTG ACT | ||||
OTUD4 | F: GCT CTG CTA TGT GTC AGT CTC T | G7 | USP31 | F: TGA GGA TTG GTG TGG CCG TA | G11 |
R: TTA CTT GCA ACT GTC ATC CTC TG | R: AAT CTT GTC GCT GCC TGC TC | ||||
OTUD5 | F: ATC GGA GGA GTC ATG GAT TGA A | G6 | USP33 | F: CCC TTG GTA CTT GTCA GGA TTG TA | G3 |
R: ACC TGG CGA GCC TGT TTC TCC T | R: AAG CAT AAC ACC ATA CTC GAA GAG | ||||
OTUD6A | F: TGG ATG ATC CGA AGA GTG AAC | G10 | USP34 | F: CAG CCA TAG TGC TGA AGT TCA AGT | G3 |
R: TCT TGG AAC TTC TCC AGC TCC T | R: GAC TGA CAT CAC CAG ATT GTG CT | ||||
OTUD6B | F: AAG AAT GCT GTT CCC AAG AAT G | G7 | USP35 | F: AAG TAC ATG CTC CTG ACC TTC CA | G8 |
R: CCA TAT GTC TGG CTC CTG TTA A | R: CCC AGG TTG ATG AGA CCA ATC TT | ||||
OTUD7A | F: GCA GCA CTT CTA CAT GAT CCT A | G8 | USP36 | F: TCC CAG ACA CCC ACA CAC AT | G12 |
R: TGT GTA GAT TGG CAT CTC CAG G | R: GTG GTG TTG TCC GTG TCT G | ||||
OTUD7B | F: ACT TCA CAG GGG TGC CTT GTT | G7 | USP37 | F: CAG AAG GAA ACC AGC AGG CA | G12 |
R: GTT CTT CCC TGT AAC AAC AGG A | R: CGT CCG AGC TAT TCC ACT TCC | ||||
PARP11 | F: CAG CTA CAA GAT AGA CTT TGC AG | G7 | USP38 | F: CGT GTT GGG CCT CCT TCA TC | G11 |
R: GAT GGC CTC GTT TTC ACA GAT G | R: TGC AGG GAA GGC AGT AGT GT | ||||
PRPF8 | F: TCT ATG ACG ACT GGC TCA AGA C | G5 | USP39 | F: GGA GTC TCG CGG TTC CAC T | G12 |
R: ATC GCC ATG CTT GTT GAC AGT G | R: CGC ACA AAC GGG ACA ACA GA | ||||
PSMD14 | F: GGT TTG ACA CTT CAG GAC TAC A | G5 | USP41 | F: GGT TCT GCT TCA ATG ACT CCA ATA | G10 |
R: GAG GTC ATA AGT ACA TCC ACAT G | R: AGC CAT CTC ACG ATT GAC CGG CT | ||||
PSMD7 | F: ACG TCT TCA ACC TGC TGC CAG A | G5 | USP42 | F: TTA CTC ATC CCA CCC ATA GCC | G1 |
R: TCC TGC CCT TCT TTC TTC TCT G | R: TCA TGT GAG AGG GAA GCT GTG GT | ||||
STAMBP | F: GAA GCC CTC CTT AGA TGT GTT | G4 | USP43 | F: GAC AGA GCT GTT TCC TGG GC | G11 |
R: TGT CCA CCA CAG GTG GCT TAG CT | R: ATA GCT GCA GGC CAC AGA GA | ||||
STAMBPL1 | F: TTC GAA GAT CAA CTC AAG AAG CA | G5 | USP45 | F: TGG GCT GTT CAG ATC CAG TAG T | G1 |
R: TCT GGT GTG TGG AAA AGC AGG A | R: ACT GTC AGT CTC CTT GGT GTA CAG | ||||
TNFAIP3 | F: CCG AGC TGT TCC ACT TGT TAA CA | G6 | USP46 | F: CCA ATC CTG CTG ATG TGG CAG TC | G2 |
R: CAA CTT TGC GGC ATT GAT GAG A | R: GCT GAT GGC TGG AAA GAT GTA GTA | ||||
USP1 | F: GAC CAA ATG TGT GAA ATA GGT AAG C | G2 | USP47 | F: CAA TGA TCA ACA TGT CAG CAG GA | G1 |
R: GCA AGT AAG GAG TAG AAG TAG GAG | R: TTT CTG GCT GGA TCC TTC AGT CT | ||||
USP2 | F: TAT GGT GCC TAC ACC CCG TCC T | G9 | USP48 | F: GCT GGT AGA TCG GGA TAA TTC CA | G2 |
R: TGA GGA AGC TGC TGG TGG GGA C | R: AAC TCA TAG GGC TCA GCT CCA G | ||||
USP3 | F: CCT TGG GTC TGT TTG ACT TGT TCA | G3 | USP49 | F: AGG ACT ACG TGC TCA ATG ATA ACC | G9 |
R: CCA GTC CCA GCT TGG TGT CAT TA | R: GCA GGA GCA GCC GTG CAC TCT | ||||
USP4 | F: GTA GAA GGC CAG CAA CCC ATC G | G1 | USP50 | F: CTA TGA TAC CCT TCC AGT TAA GG | G8 |
R: ACT AGC ACC TGA CCC TGG TAT AG | R: TGG CAT TCA CGC AGC ATG TGT TG | ||||
USP5 | F: GTC CAC AAA GAC GAG TGC GCC T | G1 | USP51 | F: GGA CCC CAG AGA CTA GGA AAC G | G1 |
R: AGG CTG AGT CGG CCG ACA GTA | R: CAT AAT CCT TAC ACA TGA AGC A | ||||
USP6 | F: CGT TGG AAT CAA CAG CAG CAT TGA | G10 | USP52 | F: TCT GGC AAG GTT TCC CTG AGA GA | G2 |
R: CCA TCC ACT TGC TCG TTC GTG TCA | R: GGT TGC CAT GCA CAT CAA AGT CT | ||||
USP7 | F: CTC TCA GAC CAT GGG ATT TCC AC | G9 | USP53 | F: GAC ATT TCC AGA GAA TGT GCT CTG | G3 |
R: ATT GGT GTG TAG ATA TGC CCA CAG | R: GAT CCA GAT TGG AAA TGT GAA AGG | ||||
USP8 | F: GAC GCC ACC TGC ATC TAT AGA AG | G1 | USP54 | F: CGT GGT AGT GTA CAA GGG ATG TTT | G2 |
R: GGA AAG TAA AAC TGT CCT GCG CAA | R: CTC CCA TGC ACT TGT GAG TTG TAA | ||||
USP9X | F: AGC TTC AAG GGT TCC AGG ACA AG | G1 | USPL1 | F: TCC CAA GTG ACA GAT AAA GAA GCT G | G12 |
R: GAA GAC TAT CTC GCA ACA CTA TGG | R: ACC CAC AGA ACA CGA TGT TAA AGA | ||||
USP9Y | F: GAG GCT GTG AGT GGC TGG AAG T | G9 | VCPIP1 | F: GCT CGC TAT GGA ATG GAC AAA C | G6 |
R: CGG ACG TGT ACC ATT GTAAGA TAT G | R: ACA TGC TCT GGT TCT ATG AGG | ||||
USP10 | F: CCT CCA CAG CCC GCA GTA TAT TT | G3 | YOD1 | F: ACT TGC CCA TCC AAT CTG GTG A | G7 |
R: GAG ATA GGA TCA TCG CCA CCA TCT | R: ACG TAA CTA GAA GCA CCA CGT T | ||||
USP11 | F: TGG TGG AAG GCG AGG ATT ATG TG | G2 | ZRANB1 | F: CTA GTG CAA GAC CAA GGG TG | G6 |
R: GCT GGG CCA AGT GCC ATC TTT C | R: ACA CAT CTT TTA GCC TTG GCC C |
DUB Gene | Primer Sequence |
---|---|
ATXN3L | F: 5′-TCA GAA GAA AGT GAT GAG TCT GG-3′ |
R: 5′-CTC TCA ATT GCT CTC GAA CTT G-3′ | |
USP12 | F: 5′-GAA CTC TGA GTC TGG TTA CAT CCT-3′ |
R: 5′-GAG GAG CTG GTA TCT CTG ATT TCA-3′ | |
USP49 | F: 5′-CCC TGA ACG CTA TCA CTG CA-3′ |
R: 5′-TTG GCC AGC ATC TCA GTG AG-3′ | |
COPS5 | F: 5′-GCA GTG GTG ATT GAT CCA ACA A-3′ |
R: 5′-AGA CCT GAC CAG TGG TAT AGT C-3′ | |
USP34 | F: 5′-CAG CCA TAG TGC TGA AGT TCA AGT-3′ |
R: 5′-GAC TGA CAT CAC CAG ATT GTG CT-3′ | |
GAPDH | F: 5′-CCC TGA ACG CTA TCA CTG CA-3′ |
R: 5′-CCA TCA CGC CAC AGT TTC-3′ |
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Lee, D.-H.; Park, J.-H.; Choi, J.; Lee, K.-J.; Yun, B.-S.; Baek, K.-H. Differential Expression of DUB Genes in Ovarian Cells Treated with Di-2-Ethylhexyl Phthalate. Int. J. Mol. Sci. 2020, 21, 1755. https://doi.org/10.3390/ijms21051755
Lee D-H, Park J-H, Choi J, Lee K-J, Yun B-S, Baek K-H. Differential Expression of DUB Genes in Ovarian Cells Treated with Di-2-Ethylhexyl Phthalate. International Journal of Molecular Sciences. 2020; 21(5):1755. https://doi.org/10.3390/ijms21051755
Chicago/Turabian StyleLee, Da-Hye, Jun-Hyeok Park, Jihye Choi, Kyung-Ju Lee, Bo-Seong Yun, and Kwang-Hyun Baek. 2020. "Differential Expression of DUB Genes in Ovarian Cells Treated with Di-2-Ethylhexyl Phthalate" International Journal of Molecular Sciences 21, no. 5: 1755. https://doi.org/10.3390/ijms21051755
APA StyleLee, D.-H., Park, J.-H., Choi, J., Lee, K.-J., Yun, B.-S., & Baek, K.-H. (2020). Differential Expression of DUB Genes in Ovarian Cells Treated with Di-2-Ethylhexyl Phthalate. International Journal of Molecular Sciences, 21(5), 1755. https://doi.org/10.3390/ijms21051755