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Keywords = superhelix

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28 pages, 4059 KiB  
Review
Use of Collagen in Cosmetic Products
by Barbara Jadach, Zofia Mielcarek and Tomasz Osmałek
Curr. Issues Mol. Biol. 2024, 46(3), 2043-2070; https://doi.org/10.3390/cimb46030132 - 4 Mar 2024
Cited by 29 | Viewed by 23527
Abstract
Collagen (CLG) belongs to the family of fibrillar proteins and is composed of left-handed α polypeptide chains, which, twisting around themselves and their axis, form a right-handed superhelix. In the chemical structure, it contains mainly proline, hydroxyproline, glycine, and hydroxylysine. It occurs naturally [...] Read more.
Collagen (CLG) belongs to the family of fibrillar proteins and is composed of left-handed α polypeptide chains, which, twisting around themselves and their axis, form a right-handed superhelix. In the chemical structure, it contains mainly proline, hydroxyproline, glycine, and hydroxylysine. It occurs naturally in the dermis in the form of fibers that provide the skin with proper density and elasticity. The review aimed to present the types of collagen protein, factors affecting its structure and its unusual role in the functioning of the human body. Also, an overview of cosmetic products containing collagen or its derivatives, the characteristics of the formulas of these products, and the effects of their use were presented. Throughout the market, there are many cosmetic and cosmeceutical products containing CLG. They are in the form of fillers administered as injections, belonging to the group of the oldest tissue fillers; products administered orally and for topical use, such as creams, gels, serums, or cosmetic masks. Analyzed studies have shown that the use of products with collagen or its peptides improves the general condition of the skin and delays the aging process by reducing the depth of wrinkles, improving hydration (in the case of oral preparations), reducing transepithelial water loss (TEWL), as well as improving skin density and elasticity. In addition, oral application of bioactive CLG peptides has shown a positive effect on the nails, reducing the frequency of their breakage. Full article
(This article belongs to the Special Issue Latest Review Papers in Molecular Biology 2024)
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10 pages, 3013 KiB  
Article
A Method for Calculating the Sign and Degree of Chirality of Supercoiled Protein Structures
by Aleksey Lutsenko, Alla Sidorova, Denis Shpigun, Ekaterina Belova and Vsevolod Tverdislov
Symmetry 2023, 15(11), 2051; https://doi.org/10.3390/sym15112051 - 12 Nov 2023
Viewed by 1560
Abstract
Chirality plays an important role in studies of natural protein structures. Therefore, much attention is paid to solving the problems associated with the development of criteria and methods for assessing the chirality of biomolecules. In this paper, a new method for calculating the [...] Read more.
Chirality plays an important role in studies of natural protein structures. Therefore, much attention is paid to solving the problems associated with the development of criteria and methods for assessing the chirality of biomolecules. In this paper, a new method for calculating the sign and degree of chirality of superhelices is proposed. The method makes it possible to characterize the chirality sign and to quantify coiled-coils and collagen superhelices. The degree of chirality is understood as a value indicating the intensity of twisting of individual helices around the axis of the superhelix. The calculation requires information about the relative spatial arrangement of the alpha carbon of the amino acid residues of the helices that make up the superhelix. The use of a small amount of raw data makes the method easy to apply, and the validity of the results of this study is confirmed through the analysis of real protein structures. Full article
(This article belongs to the Special Issue Biology and Symmetry/Asymmetry:Feature Papers 2022)
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18 pages, 5716 KiB  
Review
C3-Symmetric Ligands in Drug Design: When the Target Controls the Aesthetics of the Drug
by Mirjana Antonijevic, Christophe Rochais and Patrick Dallemagne
Molecules 2023, 28(2), 679; https://doi.org/10.3390/molecules28020679 - 10 Jan 2023
Cited by 9 | Viewed by 3674
Abstract
A number of proteins are able to adopt a homotrimeric spatial conformation. Among these structures, this feature appears as crucial for biologic targets, since it facilitates the design of C3-symmetric ligands that are especially suitable for displaying optimized ligand–target interactions and therapeutic benefits. [...] Read more.
A number of proteins are able to adopt a homotrimeric spatial conformation. Among these structures, this feature appears as crucial for biologic targets, since it facilitates the design of C3-symmetric ligands that are especially suitable for displaying optimized ligand–target interactions and therapeutic benefits. Additionally, DNA as a therapeutic target, even if its conformation into a superhelix does not correspond to a C3-symmetry, can also take advantage of these C3-symmetric ligands for better interactions and therapeutic effects. For the moment, this opportunity appears to be under-exploited, but should become more frequent with the discovery of new homotrimeric targets such as the SARS-CoV2 spike protein. Besides their potential therapeutic interest, the synthetic access to these C3-symmetric ligands often leads to chemical challenges, although drug candidates with an aesthetic structure are generally obtained. Full article
(This article belongs to the Section Medicinal Chemistry)
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14 pages, 5511 KiB  
Article
pH and Salt-Assisted Macroscopic Chirality Inversion of Gadolinium Coordination Polymer
by Ting Hou, Lan-Qing Wu, Yan Xu, Song-Song Bao and Li-Min Zheng
Molecules 2023, 28(1), 163; https://doi.org/10.3390/molecules28010163 - 25 Dec 2022
Cited by 7 | Viewed by 2370
Abstract
The precise adjustment of handedness of helical architectures is important to regulate their functions. Macroscopic chirality inversion has been achieved in organic supramolecular systems by pH, metal ions, solvents, chiral and non-chiral additives, temperature, and light, but rarely in coordination polymers (CPs). In [...] Read more.
The precise adjustment of handedness of helical architectures is important to regulate their functions. Macroscopic chirality inversion has been achieved in organic supramolecular systems by pH, metal ions, solvents, chiral and non-chiral additives, temperature, and light, but rarely in coordination polymers (CPs). In particular, salt-assisted macroscopic chirality inversion has not been reported. In this work, we carried out a systematic investigation on the role of pH and salt in regulating the morphology of CPs based on Gd(NO3)3 and R-(1-phenylethylamino)methylphosphonic acid (R-pempH2). Without extra NO3, the chirality inversion from the left-handed superhelix R-M to the right-handed superhelix R-P can be achieved by pH modulation from 3.2 to 3.8. The addition of NaNO3 (2.0 eq) at pH 3.8 results in an inversion of chiral sense from R-P to R-M as a pure phase. To our knowledge, this is the first example of salt-assisted macroscopic helical inversion in artificial systems. Full article
(This article belongs to the Special Issue Metallosupramolecular Functional Helicates)
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17 pages, 5508 KiB  
Article
Protein Helical Structures: Defining Handedness and Localization Features
by Alla E. Sidorova, Ekaterina V. Malyshko, Aleksey O. Lutsenko, Denis K. Shpigun and Olga E. Bagrova
Symmetry 2021, 13(5), 879; https://doi.org/10.3390/sym13050879 - 15 May 2021
Cited by 11 | Viewed by 3676
Abstract
The quantitative evaluation of the chirality of macromolecule structures remains one of the exciting issues in biophysics. In this paper, we propose methods for quantitative analysis of the chirality of protein helical and superhelical structures. The analysis of the chirality sign of the [...] Read more.
The quantitative evaluation of the chirality of macromolecule structures remains one of the exciting issues in biophysics. In this paper, we propose methods for quantitative analysis of the chirality of protein helical and superhelical structures. The analysis of the chirality sign of the protein helical structures (α-helices and 310-helices) is based on determining the mixed product of every three consecutive vectors between neighboring reference points—α-carbons atoms. The method for evaluating the chirality sign of coiled-coil structures is based on determining the direction and value of the angle between the coiled-coil axis and the α-helices axes. The chirality sign of the coiled coil is calculated by averaging the value of the cosine of the corresponding angle for all helices forming the superhelix. Chirality maps of helical and superhelical protein structures are presented. Furthermore, we propose an analysis of the distributions of helical and superhelical structures in polypeptide chains of several protein classes. The features common to all studied classes and typical for each protein class are revealed. The data obtained, in all likelihood, can reflect considerations about molecular machines as chiral formations. Full article
(This article belongs to the Special Issue Symmetry in Biophysics)
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