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Keywords = subgeneric division

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20 pages, 21733 KB  
Article
Taxonomy of the Genus Bryobia Koch (Acari: Tetranychidae): Reconsideration of Subgenera and Updated Species Groups
by Jawwad Hassan Mirza, Fahad Jaber Alatawi, Muhammad Kamran and Carlos Holger Wenzel Flechtmann
Insects 2024, 15(11), 859; https://doi.org/10.3390/insects15110859 - 3 Nov 2024
Cited by 3 | Viewed by 2697
Abstract
The present study aimed to revise the subgeneric divisions of the genus Bryobia based on persistent characteristics and to propose species groups in each subgenus to further ease the identification of species. As a result, only three subgenera, based on literature, are recognized, [...] Read more.
The present study aimed to revise the subgeneric divisions of the genus Bryobia based on persistent characteristics and to propose species groups in each subgenus to further ease the identification of species. As a result, only three subgenera, based on literature, are recognized, viz, subgenus Bryobia Koch (duplex setae present on leg tarsi III–IV), subgenus Allobia Livschits and Mitrofanov (duplex setae absent on leg tarsi III–IV), and subgenus Lyobia Livschits and Mitrofanov (duplex setae present only on leg tarsus III). The analysis based on morphological characters and available COI sequences on the GenBank database did not resolve the phylogenetic relationship of Bryobia species, and likewise, no support could be found for the proposed subgeneric divisions. The species in each subgenus were further categorized into species groups based on the position of the fourth pair of dorsocentral setae f1, viz, three species groups, praetiosa, osterloffi, and neoephedrae in subgenus Bryobia; three species groups, pritchardi, abbatielloi, and deserticola in subgenus Allobia; and three species groups, eurotiae, sarothamni, and rubrioculus in subgenus Lyobia. Furthermore, detailed notes are provided on eight Bryobia species which were described by Meyer, having morphological characteristics of both the tribes Bryobiini and Hystrichonychini. The generic status of two bryobine species, B. pseudorubrioculus Smiley and Baker and B. tuttlie Smiley and Baker, is also discussed and considered as species inquirendae. Full article
(This article belongs to the Section Insect Systematics, Phylogeny and Evolution)
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13 pages, 4890 KB  
Article
Complete Chloroplast Genome of Crassula aquatica: Comparative Genomic Analysis and Phylogenetic Relationships
by Kyu Tae Park and OGyeong Son
Genes 2024, 15(11), 1399; https://doi.org/10.3390/genes15111399 - 30 Oct 2024
Cited by 1 | Viewed by 1700
Abstract
Background/Objectives: Crassula aquatica (L.) Schonl. is a very small annual plant growing along riverbanks. Chloroplast (cp) genomes, crucial for photosynthesis, are highly conserved and play a key role in understanding plant evolution. In this study, we conducted cp genome analysis of C. aquatica [...] Read more.
Background/Objectives: Crassula aquatica (L.) Schonl. is a very small annual plant growing along riverbanks. Chloroplast (cp) genomes, crucial for photosynthesis, are highly conserved and play a key role in understanding plant evolution. In this study, we conducted cp genome analysis of C. aquatica, aiming to elucidate its phylogenetic position and structural variations. We analyzed and described the features of the complete cp genome of C. aquatica and conducted comparative analysis with the cp genomes of closely related taxa. Rsults: The cp genome was 144,503 bp in length and exhibited the typical quadripartite structure, consisting of a large single-copy region (LSC; 77,993 bp), a small single-copy region (SSC; 16,784 bp), and two inverted repeats (24,863 bp). The cp genome of C. aquatica comprised 113 unique genes, including 79 protein-coding genes (PCGs), 30 tRNAs, and 4 rRNA genes. Comparative genomic analysis of 13 other Crassula species and six outgroups demonstrated highly conserved gene content and order among Crassula species. However, notable differences were observed, including the complete loss of the rpoC1 intron in C. aquatica and several closely related species, which may serve as a synapomorphic trait supporting the monophyly of the subgenus Disporocarpa. We analyzed the nucleotide diversity among 14 Crassula cp genomes and identified five highly variable regions (pi > 0.08) in the IGS regions. Phylogenetic analysis based on 78 PCGs confirmed the monophyly of Crassula and its division into two subgenera: Crassula and Disporocarpa. Although the phylogenetic tree supported the subgeneric classification system, the sectional classification system requires reassessment. Conclusions: In this study, we conducted a comparative analysis of the cp genome of the genus Crassula. We inferred evolutionary trends within the Crassula cp genome and provided molecular evidence supporting the integration of the genus Tillaea into the genus Crassula. However, as this study does not represent all species within the genus Tillaea, further comprehensive phylogenetic analyses are requrired. Full article
(This article belongs to the Topic Plant Chloroplast Genome and Evolution)
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34 pages, 20316 KB  
Article
New Genus and New Subgenera of Camerobiid Mites (Acari: Prostigmata: Camerobiidae) with a Key to World Species of the Genus
by Jawwad Hassan Mirza, Muhammad Kamran and Fahad Jaber Alatawi
Insects 2022, 13(4), 344; https://doi.org/10.3390/insects13040344 - 31 Mar 2022
Cited by 5 | Viewed by 3584
Abstract
A new genus, Monobius Alatawi and Kamran, is hereby proposed for the two already described species, viz; M. electrus (Żmudziński) and M. meyerae (Bolland). In addition, the monospecific genus Tillandsobius Bolland is synonymized with the genus Tycherobius Bolland due to variations [...] Read more.
A new genus, Monobius Alatawi and Kamran, is hereby proposed for the two already described species, viz; M. electrus (Żmudziński) and M. meyerae (Bolland). In addition, the monospecific genus Tillandsobius Bolland is synonymized with the genus Tycherobius Bolland due to variations in the setae number of tibiae I–IV. Further, the genus Neophyllobius Berlese is categorized in two new subgeneric divisions as Neophyllobius Berlese and Monophyllobius Mirza. The number and position of the midventral setae on tarsi I–IV are considered as strong diagnostic generic and subgeneric diagnostic characters. The present study also includes the key to all known species of the genus Neophyllobius. The morphological characters of ten poorly described Neophyllobius species were studied in detail through published literature. The ambiguities in the ventral idiosoma setal notation are highlighted and discussed. It is concluded that two intercoxal setae 3a4a are always present on small platelets, paired aggenital setae (ag) are present anteriorly and paired genital setae (g) present posteriorly on genital shield. In addition, five records of new species for Saudi Arabia are reported along with re–descriptions of three species. Full article
(This article belongs to the Special Issue Mite Nature: Taxonomy, Behavior and Dispersion)
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15 pages, 3765 KB  
Article
New Insight into the Systematics of European Lepidocyrtus (Collembola: Entomobryidae) Using Molecular and Morphological Data
by Daniel Winkler, Eduardo Mateos, György Traser, Ferenc Lakatos and Viktória Tóth
Insects 2020, 11(5), 302; https://doi.org/10.3390/insects11050302 - 13 May 2020
Cited by 13 | Viewed by 3733
Abstract
The Collembolan genus Lepidocyrtus is subdivided into up to eight subgenera, of which only Lepidocyrtus s.str. (Bourlet, 1839) and Lanocyrtus (Yoshii & Suhardjono, 1989) are represented by European species. The discovery of unique characters in the European species Lepidocyrtus tomosvaryi (rounded dental tubercle) [...] Read more.
The Collembolan genus Lepidocyrtus is subdivided into up to eight subgenera, of which only Lepidocyrtus s.str. (Bourlet, 1839) and Lanocyrtus (Yoshii & Suhardjono, 1989) are represented by European species. The discovery of unique characters in the European species Lepidocyrtus tomosvaryi (rounded dental tubercle) and L. peisonis (lateral tuft of long filiform chaetae in abdomen III) has only described so far for species of the subgenera Setogaster (Salmon, 1951) and Cinctocyrtus (Yoshii & Suhardjono, 1989) and has raised the need to perform a molecular analysis by involving other representative species of the genus. For this study, phylogenetic analysis of 15 Lepidocyrtus species occurring in the Carpathian Basin were carried out. The analyses, which was based on both concatenated datasets of COII and EF1-α sequences and individual gene sequences, clearly placed L. tomosvaryi within the subgenus Lanocyrtus and L. peisonis within Lepidocyrtus s.srt. European species groups defined on the basis of morphological characters were only partly confirmed by the concatenated and COII analyses because of the splitting of the pallidus–serbicus-group, whereas EF1- α sequences weakly supported this group. Full article
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