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  • Article
  • Open Access
3 Citations
5,002 Views
14 Pages

14 November 2020

Protein phosphorylation is a crucial post-translational modification that plays an important role in the regulation of cellular signaling processes. Site-specific quantitation of phosphorylation levels can help decipher the physiological functions of...

(This article belongs to the Special Issue Mass Spectrometric Proteomics II)
  • Article
  • Open Access
12 Citations
5,009 Views
17 Pages

Stable-isotope dimethyl labeling is a highly reactive and cost-effective derivatization procedure that could be utilized in proteomics analysis. In this study, a liquid chromatography– tandem mass spectrometry in multiple reaction monitoring mo...

(This article belongs to the Special Issue Recent Advances in Food Chemistry and Microbiology in Relation to Health)
  • Article
  • Open Access
10 Citations
4,066 Views
22 Pages

Methane (CH4), which is produced endogenously in animals and plants, was recently suggested to play a role in cellular physiology, potentially influencing the signaling pathways and regulatory mechanisms involved in nitrosative and oxidative stress r...

(This article belongs to the Special Issue Cellular ROS and Antioxidants: Physiological and Pathological Role)
  • Article
  • Open Access
23 Citations
7,624 Views
25 Pages

Quantitative Proteomic Profiling of Tachyplesin I Targets in U251 Gliomaspheres

  • Xuan Li,
  • Jianguo Dai,
  • Yongjun Tang,
  • Lulu Li and
  • Gang Jin

18 January 2017

Tachyplesin I is a cationic peptide isolated from hemocytes of the horseshoe crab and its anti-tumor activity has been demonstrated in several tumor cells. However, there is limited information providing the global effects and mechanisms of tachyples...

(This article belongs to the Special Issue Marine Compounds as Modulators of Autophagy and Lysosomal Activity)
  • Article
  • Open Access
3,377 Views
19 Pages

The Dynamic and Crucial Role of the Arginine Methylproteome in Myoblast Cell Differentiation

  • Nikolaos A. Papanikolaou,
  • Marios Nikolaidis,
  • Grigorios D. Amoutzias,
  • Ariadni Fouza,
  • Maria Papaioannou,
  • Akhilesh Pandey and
  • Athanasios G. Papavassiliou

20 January 2023

Protein arginine methylation is an extensive and functionally significant post-translational modification. However, little is known about its role in differentiation at the systems level. Using stable isotope labeling by amino acids in cell culture (...

(This article belongs to the Special Issue Central and Peripheral Molecular Mechanisms of Metabolism Regulation 2.0)
  • Article
  • Open Access
3 Citations
6,107 Views
9 Pages

Comparison of LFQ and IPTL for Protein Identification and Relative Quantification

  • Christina Johannsen,
  • Christian J. Koehler and
  • Bernd Thiede

2 September 2021

(1) Background: Mass spectrometry-based quantitative proteome profiling is most commonly performed by label-free quantification (LFQ), stable isotopic labeling with amino acids in cell culture (SILAC), and reporter ion-based isobaric labeling methods...

(This article belongs to the Special Issue Advancements in Analytical Techniques for Proteomics)
  • Article
  • Open Access
13 Citations
3,909 Views
26 Pages

Dynamics of Protein Phosphorylation during Arabidopsis Seed Germination

  • Emmanuel Baudouin,
  • Juliette Puyaubert,
  • Patrice Meimoun,
  • Mélisande Blein-Nicolas,
  • Marlène Davanture,
  • Michel Zivy and
  • Christophe Bailly

Seed germination is critical for early plantlet development and is tightly controlled by environmental factors. Nevertheless, the signaling networks underlying germination control remain elusive. In this study, the remodeling of Arabidopsis seed phos...

(This article belongs to the Section Molecular Plant Sciences)
  • Article
  • Open Access
3 Citations
4,235 Views
16 Pages

Proteomic Analysis of Zn Depletion/Repletion in the Hormone-Secreting Thyroid Follicular Cell Line FRTL-5

  • Barbara Guantario,
  • Angela Capolupo,
  • Maria Chiara Monti,
  • Guido Leoni,
  • Giulia Ranaldi,
  • Alessandra Tosco,
  • Liberato Marzullo,
  • Chiara Murgia and
  • Giuditta Perozzi

14 December 2018

Zinc deficiency predisposes to a wide spectrum of chronic diseases. The human Zn proteome was predicted to represent about 10% of the total human proteome, reflecting the broad array of metabolic functions in which this micronutrient is known to part...

(This article belongs to the Special Issue Health Effects of Dietary Zinc)