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Keywords = sinogram inpainting

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19 pages, 8686 KB  
Article
Prior-FOVNet: A Multimodal Deep Learning Framework for Megavoltage Computed Tomography Truncation Artifact Correction and Field-of-View Extension
by Long Tang, Mengxun Zheng, Peiwen Liang, Zifeng Li, Yongqi Zhu and Hua Zhang
Sensors 2025, 25(1), 39; https://doi.org/10.3390/s25010039 - 25 Dec 2024
Cited by 1 | Viewed by 1656
Abstract
Megavoltage computed tomography (MVCT) plays a crucial role in patient positioning and dose reconstruction during tomotherapy. However, due to the limited scan field of view (sFOV), the entire cross-section of certain patients may not be fully covered, resulting in projection data truncation. Truncation [...] Read more.
Megavoltage computed tomography (MVCT) plays a crucial role in patient positioning and dose reconstruction during tomotherapy. However, due to the limited scan field of view (sFOV), the entire cross-section of certain patients may not be fully covered, resulting in projection data truncation. Truncation artifacts in MVCT can compromise registration accuracy with the planned kilovoltage computed tomography (KVCT) and hinder subsequent MVCT-based adaptive planning. To address this issue, we propose a Prior-FOVNet to correct the truncation artifacts and extend the field of view (eFOV) by leveraging material and shape priors learned from the KVCT of the same patient. Specifically, to address the intensity discrepancies between different imaging modalities, we employ a contrastive learning-based GAN, named TransNet, to transform KVCT images into synthesized MVCT (sMVCT) images. The sMVCT images, along with pre-corrected MVCT images obtained via sinogram extrapolation, are then input into a Swin Transformer-based image inpainting network for artifact correction and FOV extension. Experimental results using both simulated and real patient data demonstrate that our method outperforms existing truncation correction techniques in reducing truncation artifacts and reconstructing anatomical structures beyond the sFOV. It achieves the lowest MAE of 23.8 ± 5.6 HU and the highest SSIM of 97.8 ± 0.6 across the test dataset, thereby enhancing the reliability and clinical applicability of MVCT in adaptive radiotherapy. Full article
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15 pages, 2449 KB  
Article
Sinogram Upsampling via Sub-Riemannian Diffusion with Adaptive Weighting
by JaKeoung Koo
Electronics 2023, 12(21), 4503; https://doi.org/10.3390/electronics12214503 - 1 Nov 2023
Viewed by 2241
Abstract
Computed tomography is a versatile imaging technique used to enable seeing internal structures of objects without opening or destroying them. This is possible through a process called tomographic reconstruction, which reconstructs images from projections of the object that are obtained by penetrating the [...] Read more.
Computed tomography is a versatile imaging technique used to enable seeing internal structures of objects without opening or destroying them. This is possible through a process called tomographic reconstruction, which reconstructs images from projections of the object that are obtained by penetrating the object with beams of radiation, such as X-rays, from different angles. These projection data are often limited to low-resolution data in terms of projection angles. These limited or subsampled data make it difficult to obtain high-quality reconstruction results. Hence, upsampling projection data is necessary. In this paper, we propose a sinogram upsampling method via the sub-Riemannian diffusion process. We first lift the data into a feature space, and we fill in the missing angle parts by propagating information from the observed data to the missing parts. We observe that the sinogram with limited angle data has high directional dependency, and based on this observation, we suggest an adaptive weighting scheme to keep information propagating toward the missing regions. This adaptive weighting allows for diffusing toward the desired directions. The experimental results show the effectiveness of the proposed method in some scenarios regarding inpainting fine details, when compared to the existing model-based methods, such as Plug-and-Play and total generalized variation. Full article
(This article belongs to the Special Issue Advances in Biomedical Imaging and Processing)
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16 pages, 10641 KB  
Article
Sinogram Inpainting with Generative Adversarial Networks and Shape Priors
by Emilien Valat, Katayoun Farrahi and Thomas Blumensath
Tomography 2023, 9(3), 1137-1152; https://doi.org/10.3390/tomography9030094 - 13 Jun 2023
Cited by 8 | Viewed by 4352
Abstract
X-ray computed tomography is a widely used, non-destructive imaging technique that computes cross-sectional images of an object from a set of X-ray absorption profiles (the so-called sinogram). The computation of the image from the sinogram is an ill-posed inverse problem, which becomes underdetermined [...] Read more.
X-ray computed tomography is a widely used, non-destructive imaging technique that computes cross-sectional images of an object from a set of X-ray absorption profiles (the so-called sinogram). The computation of the image from the sinogram is an ill-posed inverse problem, which becomes underdetermined when we are only able to collect insufficiently many X-ray measurements. We are here interested in solving X-ray tomography image reconstruction problems where we are unable to scan the object from all directions, but where we have prior information about the object’s shape. We thus propose a method that reduces image artefacts due to limited tomographic measurements by inferring missing measurements using shape priors. Our method uses a Generative Adversarial Network that combines limited acquisition data and shape information. While most existing methods focus on evenly spaced missing scanning angles, we propose an approach that infers a substantial number of consecutive missing acquisitions. We show that our method consistently improves image quality compared to images reconstructed using the previous state-of-the-art sinogram-inpainting techniques. In particular, we demonstrate a 7 dB Peak Signal-to-Noise Ratio improvement compared to other methods. Full article
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15 pages, 4909 KB  
Article
Limited-Angle CT Reconstruction with Generative Adversarial Network Sinogram Inpainting and Unsupervised Artifact Removal
by En Xie, Peijun Ni, Rongfan Zhang and Xiongbing Li
Appl. Sci. 2022, 12(12), 6268; https://doi.org/10.3390/app12126268 - 20 Jun 2022
Cited by 6 | Viewed by 4671
Abstract
High-quality limited-angle computed tomography (CT) reconstruction is in high demand in the medical field. Being unlimited by the pairing of sinogram and the reconstructed image, unsupervised methods have attracted wide attention from researchers. The reconstruction limit of the existing unsupervised reconstruction methods, however, [...] Read more.
High-quality limited-angle computed tomography (CT) reconstruction is in high demand in the medical field. Being unlimited by the pairing of sinogram and the reconstructed image, unsupervised methods have attracted wide attention from researchers. The reconstruction limit of the existing unsupervised reconstruction methods, however, is to use [0°, 120°] of projection data, and the quality of the reconstruction still has room for improvement. In this paper, we propose a limited-angle CT reconstruction generative adversarial network based on sinogram inpainting and unsupervised artifact removal to further reduce the angle range limit and to improve the image quality. We collected a large number of CT lung and head images and Radon transformed them into missing sinograms. Sinogram inpainting network is developed to complete missing sinograms, based on which the filtered back projection algorithm can output images with most artifacts removed; then, these images are mapped to artifact-free images by using artifact removal network. Finally, we generated reconstruction results sized 512×512 that are comparable to full-scan reconstruction using only [0°, 90°] of limited sinogram projection data. Compared with the current unsupervised methods, the proposed method can reconstruct images of higher quality. Full article
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20 pages, 19368 KB  
Article
Complete Ring Artifacts Reduction Procedure for Lab-Based X-ray Nano CT Systems
by Jakub Šalplachta, Tomáš Zikmund, Marek Zemek, Adam Břínek, Yoshihiro Takeda, Kazuhiko Omote and Jozef Kaiser
Sensors 2021, 21(1), 238; https://doi.org/10.3390/s21010238 - 1 Jan 2021
Cited by 16 | Viewed by 7568
Abstract
In this article, we introduce a new ring artifacts reduction procedure that combines several ideas from existing methods into one complex and robust approach with a goal to overcome their individual weaknesses and limitations. The procedure differentiates two types of ring artifacts according [...] Read more.
In this article, we introduce a new ring artifacts reduction procedure that combines several ideas from existing methods into one complex and robust approach with a goal to overcome their individual weaknesses and limitations. The procedure differentiates two types of ring artifacts according to their cause and character in computed tomography (CT) data. Each type is then addressed separately in the sinogram domain. The novel iterative schemes based on relative total variations (RTV) were integrated to detect the artifacts. The correction process uses the image inpainting, and the intensity deviations smoothing method. The procedure was implemented in scope of lab-based X-ray nano CT with detection systems based on charge-coupled device (CCD) and scientific complementary metal–oxide–semiconductor (sCMOS) technologies. The procedure was then further tested and optimized on the simulated data and the real CT data of selected samples with different compositions. The performance of the procedure was quantitatively evaluated in terms of the artifacts’ detection accuracy, the comparison with existing methods, and the ability to preserve spatial resolution. The results show a high efficiency of ring removal and the preservation of the original sample’s structure. Full article
(This article belongs to the Special Issue Tomography Sensing Technologies)
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21 pages, 8710 KB  
Article
Promising Generative Adversarial Network Based Sinogram Inpainting Method for Ultra-Limited-Angle Computed Tomography Imaging
by Ziheng Li, Ailong Cai, Linyuan Wang, Wenkun Zhang, Chao Tang, Lei Li, Ningning Liang and Bin Yan
Sensors 2019, 19(18), 3941; https://doi.org/10.3390/s19183941 - 12 Sep 2019
Cited by 57 | Viewed by 7635
Abstract
Limited-angle computed tomography (CT) image reconstruction is a challenging problem in the field of CT imaging. In some special applications, limited by the geometric space and mechanical structure of the imaging system, projections can only be collected with a scanning range of less [...] Read more.
Limited-angle computed tomography (CT) image reconstruction is a challenging problem in the field of CT imaging. In some special applications, limited by the geometric space and mechanical structure of the imaging system, projections can only be collected with a scanning range of less than 90°. We call this kind of serious limited-angle problem the ultra-limited-angle problem, which is difficult to effectively alleviate by traditional iterative reconstruction algorithms. With the development of deep learning, the generative adversarial network (GAN) performs well in image inpainting tasks and can add effective image information to restore missing parts of an image. In this study, given the characteristic of GAN to generate missing information, the sinogram-inpainting-GAN (SI-GAN) is proposed to restore missing sinogram data to suppress the singularity of the truncated sinogram for ultra-limited-angle reconstruction. We propose the U-Net generator and patch-design discriminator in SI-GAN to make the network suitable for standard medical CT images. Furthermore, we propose a joint projection domain and image domain loss function, in which the weighted image domain loss can be added by the back-projection operation. Then, by inputting a paired limited-angle/180° sinogram into the network for training, we can obtain the trained model, which has extracted the continuity feature of sinogram data. Finally, the classic CT reconstruction method is used to reconstruct the images after obtaining the estimated sinograms. The simulation studies and actual data experiments indicate that the proposed method performed well to reduce the serious artifacts caused by ultra-limited-angle scanning. Full article
(This article belongs to the Special Issue Machine Learning for Biomedical Imaging and Sensing)
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18 pages, 5729 KB  
Article
Development of Limited-Angle Iterative Reconstruction Algorithms with Context Encoder-Based Sinogram Completion for Micro-CT Applications
by Shih-Chun Jin, Chia-Jui Hsieh, Jyh-Cheng Chen, Shih-Huan Tu, Ya-Chen Chen, Tzu-Chien Hsiao, Angela Liu, Wen-Hsiang Chou, Woei-Chyn Chu and Chih-Wei Kuo
Sensors 2018, 18(12), 4458; https://doi.org/10.3390/s18124458 - 16 Dec 2018
Cited by 11 | Viewed by 7197
Abstract
Limited-angle iterative reconstruction (LAIR) reduces the radiation dose required for computed tomography (CT) imaging by decreasing the range of the projection angle. We developed an image-quality-based stopping-criteria method with a flexible and innovative instrument design that, when combined with LAIR, provides the image [...] Read more.
Limited-angle iterative reconstruction (LAIR) reduces the radiation dose required for computed tomography (CT) imaging by decreasing the range of the projection angle. We developed an image-quality-based stopping-criteria method with a flexible and innovative instrument design that, when combined with LAIR, provides the image quality of a conventional CT system. This study describes the construction of different scan acquisition protocols for micro-CT system applications. Fully-sampled Feldkamp (FDK)-reconstructed images were used as references for comparison to assess the image quality produced by these tested protocols. The insufficient portions of a sinogram were inpainted by applying a context encoder (CE), a type of generative adversarial network, to the LAIR process. The context image was passed through an encoder to identify features that were connected to the decoder using a channel-wise fully-connected layer. Our results evidence the excellent performance of this novel approach. Even when we reduce the radiation dose by 1/4, the iterative-based LAIR improved the full-width half-maximum, contrast-to-noise and signal-to-noise ratios by 20% to 40% compared to a fully-sampled FDK-based reconstruction. Our data support that this CE-based sinogram completion method enhances the efficacy and efficiency of LAIR and that would allow feasibility of limited angle reconstruction. Full article
(This article belongs to the Special Issue Deep Learning-Based Image Sensors)
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