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Keywords = planktonic freshwater ciliates

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30 pages, 7008 KiB  
Article
Microfossil (Diatoms, Tintinnids, and Testate Amoebae) Assemblages in the Holocene Sediments of the Laptev Sea Shelf off the Yana River as a Proxy for Paleoenvironments
by Maria S. Obrezkova, Lidiya N. Vasilenko, Ira B. Tsoy, Xuefa Shi, Limin Hu, Yaroslav V. Kuzmin, Aleksandr N. Kolesnik, Alexandr V. Alatortsev, Anna A. Mariash, Evgeniy A. Lopatnikov, Irina A. Yurtseva, Darya S. Khmel and Anatolii S. Astakhov
Quaternary 2025, 8(3), 40; https://doi.org/10.3390/quat8030040 - 30 Jul 2025
Viewed by 232
Abstract
The paper presents the results of a microfossil study of Holocene sediments in the Yana River flow zone in the southeastern part of the Laptev Sea. A rich diatom flora (242 species and intraspecific taxa, of which 177 species are freshwater) was revealed; [...] Read more.
The paper presents the results of a microfossil study of Holocene sediments in the Yana River flow zone in the southeastern part of the Laptev Sea. A rich diatom flora (242 species and intraspecific taxa, of which 177 species are freshwater) was revealed; additionally, five species of marine tintinnids (planktonic ciliates) and 15 species of freshwater testate amoebae (testacean) were discovered for the first time in the sea sediments. Three assemblages of microfossils reflecting the phases of environmental changes during the Holocene transgression are distinguished in the studied sediments of core LV83-32. Assemblage 1 was formed under terrestrial conditions (assemblage of diatoms Eunotia-Pinnularia and testacean Difflugia-Cylindrifflugia-Centropyxis), assemblage 2 in the zone of mixing of sea and fresh waters (assemblages of diatoms Cyclotella striata-Aulacoseira, Thalassiosira hyperborea-Chaetoceros and T. hyperborea-Aulacoseira, testacean Cyclopyxis kahli, tintinnids Tintinnopsis fimbriata), and assemblage 3 reflects modern conditions in the inner shelf of the Laptev Sea under the strong influence of river runoff (assemblage of diatoms T. hyperborea-Aulacoseira-M. arctica and tintinnids Tintinnopsis ventricosoides). Changes in the natural environment in the coastal part of the Laptev Sea shelf during the Holocene, established by microfossil assemblages, are confirmed by geochemical data. Full article
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26 pages, 4593 KiB  
Article
Planktonic Pro- and Microeukaryotes of the Kuibyshev Reservoir and Its Bays During the Cyanobacterial Bloom Period
by Mikhail Yu. Gorbunov, Svetlana V. Bykova, Natalia G. Tarasova, Ekaterina S. Krasnova and Marina V. Umanskaya
Water 2025, 17(11), 1602; https://doi.org/10.3390/w17111602 - 25 May 2025
Cited by 1 | Viewed by 552
Abstract
Kuibyshev Reservoir, the largest in the Volga basin, is poorly covered by modern molecular studies. The results of a metabarcoding study of pro- and eukaryotic microbial plankton in its lower section during the summer period are presented. Bacterioplankton composition was typical for most [...] Read more.
Kuibyshev Reservoir, the largest in the Volga basin, is poorly covered by modern molecular studies. The results of a metabarcoding study of pro- and eukaryotic microbial plankton in its lower section during the summer period are presented. Bacterioplankton composition was typical for most temperate freshwater bodies and characterized by the dominance of cyanobacteria, Pseudomonadota, Bacteroidota, Actinomycetota, and PVC superphylum (Verrucomicrobiota and Planctomycetota), with a somewhat increased proportion of the latter. The protist community was dominated by Cryptista, principally phototrophic, and various ciliates. Several picoeukaryotic groups were newly detected in the reservoir. A relationship between the composition of both bacterioplankton and protist communities and the stage of phytoplankton succession, including the cyanobacterial bloom, was observed. Some inconsistency between the cyanobacterial bloom phase and the structure of other parts of the microbial plankton is obviously due to some temporal delay, spatial station position, and inflow from tributaries. Heterotrophic bacterioplankton indicator species of the main bloom stage include OTUs representing both the phycosphere of colonial cyanobacteria and free-living species. Among the protists, sessile ciliates benefit most from plenty of substrates for colonization, while cyanobacterial grazers and parasites were minor. Overall, the cyanobacterial bloom creates new niches for the plankton community and significantly modifies its structure. Full article
(This article belongs to the Section Biodiversity and Functionality of Aquatic Ecosystems)
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28 pages, 10388 KiB  
Article
Two-Decade Changes in the Ciliate Assemblage Feeding Pattern Reflect the Reservoir Nutrient Load
by Miroslav Macek, Jaroslav Vrba, Josef Hejzlar, Klára Řeháková, Jiří Jarošík, Michal Šorf and Karel Šimek
Diversity 2024, 16(9), 534; https://doi.org/10.3390/d16090534 - 1 Sep 2024
Viewed by 2229
Abstract
The perception of the importance of ciliate in freshwater has changed dramatically since the “microbial loop” conceptualisation, reflecting methodological attempts. The data from two decades (1994–2018) on the surface (0–3 m) ciliate assemblage in the Slapy reservoir (Vltava River, Czech Republic) during two [...] Read more.
The perception of the importance of ciliate in freshwater has changed dramatically since the “microbial loop” conceptualisation, reflecting methodological attempts. The data from two decades (1994–2018) on the surface (0–3 m) ciliate assemblage in the Slapy reservoir (Vltava River, Czech Republic) during two different nutrient-load defined periods were analysed. We grouped the identified, quantified, and biomass-evaluated ciliates in the quantitative protargol-impregnated preparations according to their feeding behaviour. The sampling median and interquartile range data of the ciliates were plotted; the modelled water age, nutrients, bacteria, heterotrophic nanoflagellates, and Rhodomonas spp. were applied as the main explanatory background variables. We validated the differences between the periods, engaging multivariate analyses. The picoplankton-filtering species dominated the assemblages in an annual mean (halteriids and minute strobilidiids followed by peritrichs). Algae hunting urotrichs, Balanion planctonicum, and nanoplankton filtering tintinnids were significant before the spring phytoplankton peak when a maximum of ciliate biomass reflected mixotrophic nanoplankton filtering pelagostrombidiids. Only there did ciliate biomass tightly follow their quantified prey. Heterotrophic and mixotrophic Askenasia and Lagynophrya were typical raptorial/flagellate-hunting cilates; only Mesodinium spp. reached the maximum during autumn. The observed oligotrophication of the reservoir increased the ciliate assemblage biomass in the surface layer during stratification in concordance with the Plankton Ecology Group (PEG) model. Full article
(This article belongs to the Special Issue Diversity, Ecology and Genetics of Ciliates)
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10 pages, 4859 KiB  
Article
Predation of Cyclopoid Copepods on the Theronts of Ichthyophthirius multifiliis: Shedding Light on Biocontrol of White Spot Disease
by Ze-Yi Cao, Bing-Wen Xi, Qing-Jie Zhou, Kai Chen and Jun Xie
Pathogens 2023, 12(7), 860; https://doi.org/10.3390/pathogens12070860 - 22 Jun 2023
Cited by 3 | Viewed by 3436
Abstract
White spot disease, caused by the parasitic ciliate Ichthyophthirius multifiliis, is a significant threat to the freshwater fish farming industry worldwide, resulting in massive mortality and economic losses. Eliminating the free-swimming theronts from the culture environment is considered crucial for the control [...] Read more.
White spot disease, caused by the parasitic ciliate Ichthyophthirius multifiliis, is a significant threat to the freshwater fish farming industry worldwide, resulting in massive mortality and economic losses. Eliminating the free-swimming theronts from the culture environment is considered crucial for the control of I. multifiliis infection. It is well-documented that planktonic ciliates are valuable food resources for macro-zooplankton in aquatic ecosystems. In this study, we developed a fluorescence labeling method for alive theronts and found that cyclopoid copepods Thermocyclops taihokuensis, Mesocyclops spp., Macrocyclops sp., and Paracyclopina sp. present predation on the theronts in co-culture experiments. Laboratory challenge tests further confirmed that the presence of zooplankton in the culture water body significantly reduced the infection of I. multifiliis in goldfish (p < 0.01). Results from this study revealed that cyclopoid copepods have the potential to be used as biological control agents against white spot disease in aquaculture. Full article
(This article belongs to the Section Parasitic Pathogens)
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17 pages, 11226 KiB  
Article
Diversity Patterns of Protists Are Highly Affected by Methods Disentangling Biological Variants: A Case Study in Oligotrich (s.l.) Ciliates
by Jiahui Xu, Jianlin Han, Hua Su, Changyu Zhu, Zijing Quan, Lei Wu and Zhenzhen Yi
Microorganisms 2022, 10(5), 913; https://doi.org/10.3390/microorganisms10050913 - 27 Apr 2022
Cited by 1 | Viewed by 2296
Abstract
Protists are a dominant group in marine microplankton communities and play important roles in energy flux and nutrient cycling in marine ecosystems. Environmental sequences produced by high-throughput sequencing (HTS) methods are increasingly used for inferring the diversity and distribution patterns of protists. However, [...] Read more.
Protists are a dominant group in marine microplankton communities and play important roles in energy flux and nutrient cycling in marine ecosystems. Environmental sequences produced by high-throughput sequencing (HTS) methods are increasingly used for inferring the diversity and distribution patterns of protists. However, studies testing whether methods disentangling biological variants affect the diversity and distribution patterns of protists using field samples are insufficient. Oligotrich (s.l.) ciliates are one group of the abundant and dominant planktonic protists in coastal waters and open oceans. Using oligotrich (s.l.) ciliates in field samples as an example, the present study indicates that DADA2 performs better than SWARM, UNOISE, UPARSE, and UCLUST for inferring diversity patterns of oligotrich (s.l.) ciliates in the Pearl River Estuary and surrounding regions. UPARSE and UNOISE might underestimate species richness. SWARM might not be suitable for the resolution of alpha diversity owing to its rigorous clustering and sensitivity to sequence variations. UCLUST with 99% clustering threshold overestimates species richness, and the beta diversity pattern inferred by DADA2 is more reasonable than that of the other methods. Additionally, salinity is shown to be one of the key factors responsible for variations in the community distribution of ciliates, but infrequent marine–freshwater transitions occurred during evolutionary terms of this group. Full article
(This article belongs to the Section Environmental Microbiology)
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11 pages, 795 KiB  
Communication
Effectiveness of Photoprotective Strategies in Three Mixotrophic Planktonic Ciliate Species
by Bettina Sonntag and Ruben Sommaruga
Diversity 2020, 12(6), 252; https://doi.org/10.3390/d12060252 - 20 Jun 2020
Cited by 7 | Viewed by 5954
Abstract
Mixotrophic ciliate assemblages often prevail in summer in the surface layers of lakes. During this time, they are potentially exposed to damaging levels of incident solar ultraviolet radiation (UVR) and need efficient photoprotective mechanisms to minimize the damage. Herein, we tested the algal-bearing [...] Read more.
Mixotrophic ciliate assemblages often prevail in summer in the surface layers of lakes. During this time, they are potentially exposed to damaging levels of incident solar ultraviolet radiation (UVR) and need efficient photoprotective mechanisms to minimize the damage. Herein, we tested the algal-bearing species of Pelagodileptus trachelioides, Stokesia vernalis, and Vorticella chlorellata for how they handled stress under exposure to the artificial sunlight spectrum (i.e., UV treatment), just photosynthetically active radiation (PAR), or in the dark (i.e., control). In addition to measurements of their survival, changes in behavior, shape, and whether dark or photoenzymatic repair (PER) mechanisms are present, we measured the concentration of UV-absorbing compounds (i.e., mycosporine-like amino acids). In contrast to the response in the PAR and dark treatments, sublethal effects were observed in all species when exposed to UVR. A wavelength-specific test for P. trachelioides revealed that UV-B was especially lethal. These results suggest that the photoprotective mechanisms found in these ciliates are not sufficient to allow for their survival directly at the surface and that, accordingly, they need to shift their position further down in the water column. Full article
(This article belongs to the Special Issue Biodiversity of Ciliates and their Symbionts)
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13 pages, 369 KiB  
Article
Freshwater Microcosms-Based Assessment of Eco-toxicological Effects of a Chemical Effluent from the Pilcam Industry in Cameroon
by A . Monkiedje, T. Njine, A. L. Meyabeme Elono, S. H. Zebaze, N. Kemka, P. B. Tchounwou and J. E. Djomo
Int. J. Environ. Res. Public Health 2004, 1(2), 111-123; https://doi.org/10.3390/ijerph2004020111 - 30 Sep 2004
Viewed by 10777
Abstract
We studied the acute toxicity of a raw effluent from a battery manufacturing plant (Pilcam) in Douala, Cameroon, to a freshwater fish (Oreochromis niloticus), and subsequently evaluated its sub-acute effects on water quality and the biota in freshwater microscosms. The acute [...] Read more.
We studied the acute toxicity of a raw effluent from a battery manufacturing plant (Pilcam) in Douala, Cameroon, to a freshwater fish (Oreochromis niloticus), and subsequently evaluated its sub-acute effects on water quality and the biota in freshwater microscosms. The acute toxicity test was based on 96 hrs static renewal bioassays that resulted in 96-h LC50 and LC90 values of 16 and 20.7% (v/v), respectively. The sub-acute experiments were conducted by exposing several species of aquatic organisms (plankton, macro-invertebrates and mollusks) to lower effluent concentrations [1.6%, 8.0%, 16% (v/v)] for six weeks, and monitoring their survival rates, as well as the physical and chemical characteristics of water. These concentrations were based on 10%, 50%, and 100% of the 96 h - median lethal concentrations (LC50) of the effluent to the freshwater fish, Oreochromis niloticus. Significant effects on functional parameters, such as, chlorophyll-a and total protein could not be demonstrated. However, the activity of alkaline phosphatase was significantly inhibited at all concentrations tested. Phytoplankton, zooplankton, macro-invertebrate communities and snails were negatively affected by the effluent application at concentrations ≥ 8% (v/v), with chlorophyta, ciliates, ostracoda, annelida, planaria and snails being the most sensitive groups. The snails were eliminated after 24 h exposure from microcosms treated with effluent at concentration ≥ 8% (v/v). Effluent exposure also caused significant effects on water quality parameters (DO, pH, hardness, conductivity, color, turbidity, ammonia) in general at concentrations ≥ 8% (v/v). Temperature and alkalinity were not significantly affected. Overall, data from this research indicate that a dilution of the Pilcam effluent down to 1.6% does not provide protection against chronic toxicity to aquatic organisms. Further studies are needed to determine the no observable adverse effect level (NOAEL), as well as a chronic reference concentration for this effluent. Full article
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