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21 pages, 2204 KB  
Article
Digitizing Micromaser Steady States: Entropy, Information Graphs, and Multipartite Correlations in Qubit Registers
by István Németh, Szilárd Zsóka and Attila Bencze
Entropy 2026, 28(2), 162; https://doi.org/10.3390/e28020162 (registering DOI) - 31 Jan 2026
Abstract
We develop a digitization-based analysis workflow for characterizing the entropy and correlation structure of truncated bosonic quantum fields after embedding them into small qubit registers, and illustrate it on the steady state of a coherently pumped micromaser. The cavity field is truncated to [...] Read more.
We develop a digitization-based analysis workflow for characterizing the entropy and correlation structure of truncated bosonic quantum fields after embedding them into small qubit registers, and illustrate it on the steady state of a coherently pumped micromaser. The cavity field is truncated to 32 Fock levels and embedded into a five-qubit register via a Gray-code mapping of photon number to computational basis states, with binary encoding used as a benchmark. On this register we compute reduced entropies, mutual informations, bipartite negativities and Coffman–Kundu–Wootters three-tangles for all qubit pairs and triplets, and use the resulting patterns to define information graphs. The micromaser Liouvillian naturally supports trapping manifolds in Fock space, whose structure depends on the choice of interaction angle and on thermal coupling to the reservoir. We show that these manifolds leave a clear imprint on the digitized information graph: multi-block trapping configurations induce sparse, banded patterns dominated by a few two-qubit links, while trapping on a single 32-dimensional manifold or coupling to a thermally populated cavity leads to more delocalized and collectively shared correlations. The entropy and mutual-information profiles of the register provide a complementary view on how energy and information are distributed across qubits in different parameter regimes. Although the full micromaser dynamics can in principle generate higher-order entanglement, we focus here on well-defined measures of two- and three-party correlations and treat the emerging information graph as a structural probe of digitized field states. We expect the workflow to transfer to other bosonic fields encoded in small qubit registers, and outline how the resulting information-graph view can serve as a practical diagnostic in studies of driven-dissipative correlation structure. Full article
(This article belongs to the Special Issue Dissipative Physical Dynamics)
32 pages, 16476 KB  
Article
LF-SSM: Lightweight HiPPO-Free State Space Model for Real-Time UAV Tracking
by Tianyu Wang, Xinghua Xu, Shaohua Qiu, Changchong Sheng, Di Wang, Hui Tian and Jiawei Yu
Drones 2026, 10(2), 102; https://doi.org/10.3390/drones10020102 (registering DOI) - 31 Jan 2026
Abstract
Visual object tracking from unmanned aerial vehicles (UAVs) demands both high accuracy and computational efficiency for real-time deployment on resource-constrained platforms. While state space models (SSMs) offer linear computational complexity, existing methods face critical deployment challenges. They rely on the HiPPO framework with [...] Read more.
Visual object tracking from unmanned aerial vehicles (UAVs) demands both high accuracy and computational efficiency for real-time deployment on resource-constrained platforms. While state space models (SSMs) offer linear computational complexity, existing methods face critical deployment challenges. They rely on the HiPPO framework with complex discretization procedures and employ hardware-aware algorithms optimized for high-performance GPUs, which introduce deployment overhead and are difficult to transfer to edge platforms. Additionally, their fixed polynomial bases may cause information loss for tracking features with complex geometric structures. We propose LF-SSM, a lightweight HiPPO (High-order Polynomial Projection Operators)-free state space model that reformulates state evolution on Riemannian manifolds. The core contribution is the Geodesic State Module (GSM), which performs state updates through tangent space projection and exponential mapping on the unit sphere. This design eliminates complex discretization and specialized hardware kernels while providing adaptive local coordinate systems. Extensive experiments on UAV benchmarks demonstrate that LF-SSM achieves state-of-the-art performance while running at 69 frames per second (FPS) with only 18.5 M parameters, demonstrating superior efficiency for real-time edge deployment. Full article
(This article belongs to the Section Artificial Intelligence in Drones (AID))
17 pages, 310 KB  
Article
Geometry of Lightlike Hypersurfaces in a Class of Almost (α,p)-Metallic Semi-Riemannian Manifold
by Rajinder Kaur, Vandana Gupta, Jasleen Kaur and Ibrahim Al-Dayel
Axioms 2026, 15(2), 103; https://doi.org/10.3390/axioms15020103 - 30 Jan 2026
Abstract
The aim of this paper is to investigate the geometry of lightlike hypersurfaces in an (α,p)-silver semi-Riemannian manifold. Our work analyzes the behavior of the structures induced on a lightlike hypersurface by the (α,p) [...] Read more.
The aim of this paper is to investigate the geometry of lightlike hypersurfaces in an (α,p)-silver semi-Riemannian manifold. Our work analyzes the behavior of the structures induced on a lightlike hypersurface by the (α,p)-silver semi-Riemannian framework. We define and introduce the geometry of invariant, anti-invariant, and screen semi-invariant lightlike hypersurfaces within an almost (α,p)-silver semi-Riemannian manifold. Furthermore, we develop results concerning parallelism and geodesicity of the associated distributions and illustrate these findings with suitable examples. Full article
(This article belongs to the Special Issue Advances in Differential Geometry and Singularity Theory, 2nd Edition)
20 pages, 30275 KB  
Article
Manifold Integration of Lung Emphysema Signatures (MILES): A Radiomic-Based Study
by Marek Socha, Agata Durawa, Małgorzata Jelito, Katarzyna Dziadziuszko, Witold Rzyman, Edyta Szurowska and Joanna Polanska
Mach. Learn. Knowl. Extr. 2026, 8(2), 32; https://doi.org/10.3390/make8020032 - 30 Jan 2026
Abstract
Chronic obstructive pulmonary disease (COPD) is the third leading cause of death worldwide, and emphysema is present in the majority of affected patients and can be identified on computed tomography (CT). This study investigated whether radiomic features derived from automatically and adaptively segmented [...] Read more.
Chronic obstructive pulmonary disease (COPD) is the third leading cause of death worldwide, and emphysema is present in the majority of affected patients and can be identified on computed tomography (CT). This study investigated whether radiomic features derived from automatically and adaptively segmented low-attenuation lung regions can capture distinct imaging characteristics of COPD beyond conventional emphysema measures. Radiomic features were extracted from 6078 chest CT scans of 2243 participants from the COPDGene cohort. Emphysematous regions were segmented using the MimSeg method based on Gaussian mixture modelling with patient-adjusted thresholding, and radiomic features were computed for individual lesion clusters and aggregated per patient using summary statistics, yielding 780 features per subject. Uniform Manifold Approximation and Projection (UMAP) was used to generate a low-dimensional embedding, and feature contributions were evaluated using SHAP analysis and statistical testing. The resulting embedding demonstrated structured patterns broadly aligned with Global Initiative for Chronic Obstructive Lung Disease (GOLD) stages, with greater overlap among GOLD 0–2 and more consolidated groupings for GOLD 3 and 4, reflecting differences in disease severity. The most influential features were predominantly derived from Grey Level Run Length Matrix measures, capturing textural heterogeneity and spatial organisation of emphysematous changes that are not directly described by standard density-based metrics. These findings suggest that radiomic analysis of adaptively segmented CT data may provide complementary and structurally distinct information relative to conventional emphysema measures, supporting a more nuanced characterisation of emphysema patterns in COPD. Full article
(This article belongs to the Section Learning)
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31 pages, 22732 KB  
Article
Binocular Rivalry and Fusion-Inspired Hierarchical Complementary Ensemble for No-Reference Stereoscopic Image Quality Assessment
by Yiling Tang, Shunliang Jiang, Shaoping Xu, Jian Xiao and Haiwen Yu
Sensors 2026, 26(3), 883; https://doi.org/10.3390/s26030883 - 29 Jan 2026
Viewed by 48
Abstract
No-reference stereoscopic image quality assessment (NR-SIQA) remains a fundamental challenge due to the complex biological mechanisms of binocular rivalry and fusion, particularly under asymmetric distortions. In this paper, we propose a novel framework termed Multi-Stage Complementary Ensemble (MSCE). The core innovation lies in [...] Read more.
No-reference stereoscopic image quality assessment (NR-SIQA) remains a fundamental challenge due to the complex biological mechanisms of binocular rivalry and fusion, particularly under asymmetric distortions. In this paper, we propose a novel framework termed Multi-Stage Complementary Ensemble (MSCE). The core innovation lies in the Adaptive Selective Propagation (ASP) strategy embedded within a hierarchical Transformer architecture to dynamically regulates the fusion of binocular features. Specifically, by simulating the human visual system’s transition from binocular rivalry to fusion, the ASP strategy applies nonlinear gain control to selectively reinforce features from the governing view based on binocular discrepancies. Furthermore, the proposed Hierarchical Complementary Fusion (HCF) module effectively captures and integrates low-level texture integrity, mid-level structural degradation, and high-level semantic consistency, leveraging ensemble learning principles, within a unified quality-aware manifold. Experimental results on four benchmark datasets demonstrate that the MSCE framework achieves state-of-the-art performance, particularly in terms of prediction consistency under complex asymmetric distortions. Full article
(This article belongs to the Section Sensing and Imaging)
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27 pages, 1881 KB  
Article
From Latent Manifolds to Targeted Molecular Probes: An Interpretable, Kinome-Scale Generative Machine Learning Framework for Family-Based Kinase Ligand Design
by Gennady Verkhivker, Ryan Kassab and Keerthi Krishnan
Biomolecules 2026, 16(2), 209; https://doi.org/10.3390/biom16020209 - 29 Jan 2026
Viewed by 56
Abstract
Scaffold-aware artificial intelligence (AI) models enable systematic exploration of chemical space conditioned on protein-interacting ligands, yet the representational principles governing their behavior remain poorly understood. The computational representation of structurally complex kinase small molecules remains a formidable challenge due to the high conservation [...] Read more.
Scaffold-aware artificial intelligence (AI) models enable systematic exploration of chemical space conditioned on protein-interacting ligands, yet the representational principles governing their behavior remain poorly understood. The computational representation of structurally complex kinase small molecules remains a formidable challenge due to the high conservation of ATP active site architecture across the kinome and the topological complexity of structural scaffolds in current generative AI frameworks. In this study, we present a diagnostic, modular and chemistry-first generative framework for design of targeted SRC kinase ligands by integrating ChemVAE-based latent space modeling, a chemically interpretable structural similarity metric (Kinase Likelihood Score), Bayesian optimization, and cluster-guided local neighborhood sampling. Using a comprehensive dataset of protein kinase ligands, we examine scaffold topology, latent-space geometry, and model-driven generative trajectories. We show that chemically distinct scaffolds can converge toward overlapping latent representations, revealing intrinsic degeneracy in scaffold encoding, while specific topological motifs function as organizing anchors that constrain generative diversification. The results demonstrate that kinase scaffolds spanning 37 protein kinase families spontaneously organize into a coherent, low-dimensional manifold in latent space, with SRC-like scaffolds acting as a structural “hub” that enables rational scaffold transformation. Our local sampling approach successfully converts scaffolds from other kinase families (notably LCK) into novel SRC-like chemotypes, with LCK-derived molecules accounting for ~40% of high-similarity outputs. However, both generative strategies reveal a critical limitation: SMILES-based representations systematically fail to recover multi-ring aromatic systems—a topological hallmark of kinase chemotypes—despite ring count being a top feature in our structural similarity metric. This “representation gap” demonstrates that no amount of scoring refinement can compensate for a generative engine that cannot access topologically constrained regions. By diagnosing these constraints within a transparent pipeline and reframing scaffold-aware ligand design as a problem of molecular representation our work provides a conceptual framework for interpreting generative model behavior and for guiding the incorporation of structural priors into future molecular AI architectures. Full article
(This article belongs to the Special Issue Cancer Biology: Machine Learning and Bioinformatics)
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21 pages, 477 KB  
Article
Symbolic Manifolds and Transform Closure: A Geometric Framework for Operator-Invariant Structure
by Robert Castro
Mathematics 2026, 14(3), 461; https://doi.org/10.3390/math14030461 - 28 Jan 2026
Viewed by 62
Abstract
We introduce a geometric framework in which classical transforms are represented as coordinate charts on a symbolic manifold. The construction defines symbolic curvature (κ), strain (τ), compressibility (σ), and the ratio Γ = κ/τ, which together provide a diagnostic coordinate system for comparing [...] Read more.
We introduce a geometric framework in which classical transforms are represented as coordinate charts on a symbolic manifold. The construction defines symbolic curvature (κ), strain (τ), compressibility (σ), and the ratio Γ = κ/τ, which together provide a diagnostic coordinate system for comparing representational stability across chart transitions. Within this setting, transforms such as Fourier, Laplace, wavelet, Jordan, and polynomial projection can be treated as charts connected by transition maps that preserve Γ on specified domains. We also introduce a symmetric positive-definite metric tensor Gab to quantify displacement in the invariant coordinates and to formalize minimal-effort paths (geodesics) under modeling assumptions stated in the text. The resulting framework provides a reproducible screening method for evaluating transform stability, diagnosing closure failure, and comparing transform behavior under a shared set of invariants. Full article
15 pages, 1980 KB  
Article
Distinct Cytokine Landscapes Induced by Influenza a Virus, RSV, and SARS-CoV-2 in Older Adults (65+) Using an Ex Vivo Whole Blood Stimulation Model
by Annapina Palmieri, Ilaria Schiavoni, Eleonora Olivetta, Pasqualina Leone, Alessandra Fallucca, Anita Muglia, Angelo Carfì, Antonella Di Paola, Graziano Onder and Giorgio Fedele
Pathogens 2026, 15(2), 139; https://doi.org/10.3390/pathogens15020139 - 27 Jan 2026
Viewed by 113
Abstract
Exaggerated immune responses to respiratory viruses may contribute to increased morbidity in older adults. To investigate virus-specific immune activation in this population, we developed an ex vivo whole blood stimulation model using samples from 30 healthy individuals aged ≥65 years. Whole blood was [...] Read more.
Exaggerated immune responses to respiratory viruses may contribute to increased morbidity in older adults. To investigate virus-specific immune activation in this population, we developed an ex vivo whole blood stimulation model using samples from 30 healthy individuals aged ≥65 years. Whole blood was stimulated with UV-inactivated influenza A virus (IAV), respiratory syncytial virus (RSV), and SARS-CoV-2, and the expression of 22 immune-related genes was assessed by quantitative RT-PCR array. All three viruses elicited responses with marked variability across individuals, as well as differences in the magnitude and distribution of cytokine expression across stimuli. RSV stimulation was associated with relatively higher expression of inflammatory mediators, while IAV and SARS-CoV-2 induced greater expression of Type I interferon. SARS-CoV-2 also led to an increased expression of regulatory cytokines. Although individual responses varied, correlation analysis indicated coordinated gene expression within functional categories, and Uniform Manifold Approximation and Projection (UMAP) showed distinct grouping of cytokine responses by virus and function. These findings describe differential immune mRNA expression profiles in response to viral stimuli in older adults and may support future studies aimed at understanding age-related differences in host–virus interactions. Full article
(This article belongs to the Section Viral Pathogens)
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26 pages, 416 KB  
Article
Normalized Solutions and Critical Growth in Fractional Nonlinear Schrödinger Equations with Potential
by Jie Xu, Qiongfen Zhang and Xingwen Chen
Fractal Fract. 2026, 10(2), 85; https://doi.org/10.3390/fractalfract10020085 - 26 Jan 2026
Viewed by 95
Abstract
We investigate the existence of positive normalized (mass-constrained) solutions for the fractional nonlinear Schrödinger equation [...] Read more.
We investigate the existence of positive normalized (mass-constrained) solutions for the fractional nonlinear Schrödinger equation (Δ)sv+V(x)v=λv+μ|v|p2v+|v|2s*2vinRN,v22=b2, where N>2s, s(0,1), μ>0, p(2,2s*), and 2s*=2NN2s. Here, λR denotes the Lagrange multiplier associated with the prescribed mass b>0. The potential VC1(RN) is allowed to be nonconstant and satisfies V(x)V as |x|; moreover, the perturbations induced by VV and x·V are assumed to be small in the quadratic-form sense compared with the fractional Dirichlet form (Δ)s/2v22. Using the Caffarelli–Silvestre extension, we establish a Pohozaev identity adapted to the presence of V(x) and introduce a Pohozaev manifold on the L2-sphere. Combining Jeanjean’s augmented functional approach with a splitting analysis at the Sobolev-critical level, we construct compact Palais–Smale sequences below a suitable critical energy level. As a consequence, we prove the existence of positive normalized solutions for small masses b(0,b0) in the L2-critical and L2-supercritical regimes (with respect to the lower-order power p). Full article
16 pages, 298 KB  
Article
Geometric Inequalities for Skew CR-Warped Product Submanifolds in Locally Conformal Almost Cosymplectic Manifolds
by Ali H. Alkhaldi, Fatemah Mofarreh, Huda M. Alshanbari and Akram Ali
Mathematics 2026, 14(3), 412; https://doi.org/10.3390/math14030412 - 25 Jan 2026
Viewed by 78
Abstract
In this paper, we investigate contact skew CR-warped product submanifolds of locally conformal almost cosymplectic manifolds, a framework that simultaneously generalizes warped product pseudo-slant, semi-slant, and contact CR-submanifolds. We first establish a necessary and sufficient characterization theorem showing that a proper contact skew [...] Read more.
In this paper, we investigate contact skew CR-warped product submanifolds of locally conformal almost cosymplectic manifolds, a framework that simultaneously generalizes warped product pseudo-slant, semi-slant, and contact CR-submanifolds. We first establish a necessary and sufficient characterization theorem showing that a proper contact skew CR-submanifold with integrable slant distribution admits a local warped product structure if and only if certain shape operator conditions involving the slant angle and the warping function are satisfied. Subsequently, we derive sharp geometric inequalities for the squared norm of the second fundamental form in terms of the warping function, the slant angle, and the conformal factor of the ambient manifold. The equality cases are completely characterized and lead to strong rigidity results, namely that the base manifold is totally geodesic while the slant fiber is totally umbilical in the ambient space. Several applications are presented, showing that our results recover and extend a number of known inequalities and classification theorems for warped product submanifolds in cosymplectic, Kenmotsu, and Sasakian geometries as special cases. Full article
(This article belongs to the Special Issue Submanifolds in Metric Manifolds, 2nd Edition)
23 pages, 1927 KB  
Article
Numerical Investigation of Inlet Velocity Profile Effects on Developing Laminar Flow in a Circular Pipe
by Mesude Avcı and Dimitrios V. Papavassiliou
Appl. Sci. 2026, 16(3), 1215; https://doi.org/10.3390/app16031215 - 24 Jan 2026
Viewed by 153
Abstract
Hydrodynamic development in laminar pipe flow is mostly defined by classical entrance length relations and fully developed friction factor relations. However, in real systems, the inlet velocity profiles are often shaped by upstream components such as bends, contractions, or manifolds, causing them to [...] Read more.
Hydrodynamic development in laminar pipe flow is mostly defined by classical entrance length relations and fully developed friction factor relations. However, in real systems, the inlet velocity profiles are often shaped by upstream components such as bends, contractions, or manifolds, causing them to deviate significantly from the ideal Poiseuille profile. These deviations directly affect both the development length in the entrance region and energy losses. In this study, steady three-dimensional laminar CFD simulations were performed to investigate the effect of three inlet velocity profile shapes, a uniform profile, a parabolic (Poiseuille) profile, and a strongly peaked power-law profile, in a circular pipe over a Reynolds number range of Re = 100–1500. The flow development was quantified using a profile-sensitive deviation metric based on the ratio of the maximum velocity to the local averaged fluid velocity. The results showed that, although, for all modeled cases, the flows reach the same fully developed laminar flow profile, the entrance development length strongly depends on the inlet velocity profile, and this dependence becomes more pronounced as the Reynolds number increases. The parabolic inlet profile evolves toward the Poiseuille profile very rapidly, and the additional entrance loss is minimal. On the other hand, the power-law (n = 7) profile produces the largest entrance distortions, which leads to the longest relaxation distance. Overall, the proposed perspective in this study directly links profile-based flow development with energy loss and provides a basis for shaping entrance conditions in compact laminar flow systems. In addition, an empirical scaling analysis yielded a compact power-law relation linking Ldev/D to the Reynolds number and the inlet profile parameter β=Umax/U¯. Full article
(This article belongs to the Section Fluid Science and Technology)
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26 pages, 9745 KB  
Article
Adulteration Detection of Multi-Species Vegetable Oils in Camellia Oil Using SICRIT-HRMS and Machine Learning Methods
by Mei Wang, Ting Liu, Han Liao, Xian-Biao Liu, Qi Zou, Hao-Cheng Liu and Xiao-Yin Wang
Foods 2026, 15(3), 434; https://doi.org/10.3390/foods15030434 - 24 Jan 2026
Viewed by 164
Abstract
We aimed to establish a rapid and precise method for identifying and quantifying multi-species vegetable oil (corn oil, olive oil (OLO), soybean oil, and sunflower oil (SUO)) adulterations in camellia oil (CAO), using soft ionization by chemical reaction in transfer–high-resolution mass spectrometry (SICRIT-HRMS) [...] Read more.
We aimed to establish a rapid and precise method for identifying and quantifying multi-species vegetable oil (corn oil, olive oil (OLO), soybean oil, and sunflower oil (SUO)) adulterations in camellia oil (CAO), using soft ionization by chemical reaction in transfer–high-resolution mass spectrometry (SICRIT-HRMS) and machine learning methods. The results showed that SICRIT-HRMS could effectively characterize the volatile profiles of pure and adulterated CAO samples, including binary, ternary, quaternary, and quinary adulteration systems. The low m/z region (especially 100–300) exhibited importance to oil classification in multiple feature-selection methods. For qualitative detection, binary classification models based on convolutional neural networks (CNN), Random Forest (RF), and gradient boosting trees (GBT) algorithms showed high accuracies (98.70–100.00%) for identifying CAO adulteration under no dimensionality reduction (NON), principal component analysis (PCA), and uniform manifold approximation and projection (UMAP) strategies. The RF algorithm exhibited relatively high accuracy (96.25–99.45%) in multiclass classification. Moreover, the five models, including CNN, RF, support vector machines (SVM), logistic regression (LR), and GBT, exhibited different performances in distinguishing pure and adulterated CAO. Among 1093 blind oil samples, under NON, PCA, and UMAP: 10, 5, and 67 samples were misclassified by CNN model; 6, 7, and 41 samples were misclassified by RF model; 8, 9, and 82 samples were misclassified by SVM model; 17, 18, and 78 samples were misclassified by LR model; 7, 9, and 43 samples were misclassified by GBT model. For quantitative prediction, the PCA-CNN model performed optimally in predicting adulteration levels in CAO, especially with respect to OLO and SUO, exhibiting a high coefficient of determination for calibration (RC2, 0.9664–0.9974) and coefficient of determination for prediction (Rp2, 0.9599–0.9963) values, low root mean square error of calibration (RMSEC, 0.9–5.3%) and root mean square error of prediction (RMSEP, 1.1–5.8%) values, and RPD (5.0–16.3) values greater than 3.0. These results indicate that SICRIT-HRMS combined with machine learning can rapidly and accurately identify and quantify multi-species vegetable oil adulterations in CAO, which provides a reference for developing non-targeted and high-throughput detection methods in edible oil authenticity. Full article
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21 pages, 9353 KB  
Article
YOLOv10n-Based Peanut Leaf Spot Detection Model via Multi-Dimensional Feature Enhancement and Geometry-Aware Loss
by Yongpeng Liang, Lei Zhao, Wenxin Zhao, Shuo Xu, Haowei Zheng and Zhaona Wang
Appl. Sci. 2026, 16(3), 1162; https://doi.org/10.3390/app16031162 - 23 Jan 2026
Viewed by 148
Abstract
Precise identification of early peanut leaf spot is strategically significant for safeguarding oilseed supplies and reducing pesticide reliance. However, general-purpose detectors face severe domain adaptation bottlenecks in unstructured field environments due to small feature dissipation, physical occlusion, and class imbalance. To address this, [...] Read more.
Precise identification of early peanut leaf spot is strategically significant for safeguarding oilseed supplies and reducing pesticide reliance. However, general-purpose detectors face severe domain adaptation bottlenecks in unstructured field environments due to small feature dissipation, physical occlusion, and class imbalance. To address this, this study constructs a dataset spanning two phenological cycles and proposes POD-YOLO, a physics-aware and dynamics-optimized lightweight framework. Anchored on the YOLOv10n architecture and adhering to a “data-centric” philosophy, the framework optimizes the parameter convergence path via a synergistic “Augmentation-Loss-Optimization” mechanism: (1) Input Stage: A Physical Domain Reconstruction (PDR) module is introduced to simulate physical occlusion, blocking shortcut learning and constructing a robust feature space; (2) Loss Stage: A Loss Manifold Reshaping (LMR) mechanism is established utilizing dual-branch constraints to suppress background gradients and enhance small target localization; and (3) Optimization Stage: A Decoupled Dynamic Scheduling (DDS) strategy is implemented, integrating AdamW with cosine annealing to ensure smooth convergence on small-sample data. Experimental results demonstrate that POD-YOLO achieves a 9.7% precision gain over the baseline and 83.08% recall, all while maintaining a low computational cost of 8.4 GFLOPs. This study validates the feasibility of exploiting the potential of lightweight architectures through optimization dynamics, offering an efficient paradigm for edge-based intelligent plant protection. Full article
(This article belongs to the Section Optics and Lasers)
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23 pages, 6893 KB  
Article
A New Hyperchaotic Map and Its Manifold of Conditional Symmetry
by Zhenxin Hu, Chunbiao Li, Xiaolong Qi, Ioannis P. Antoniades and Christos Volos
Symmetry 2026, 18(2), 212; https://doi.org/10.3390/sym18020212 - 23 Jan 2026
Viewed by 173
Abstract
In this work, the polarity balance of a novel two-dimensional hyperchaotic map is considered, and thus the corresponding manifold of conditional symmetry is coined. The unique map has a simple structure but provides direct 2-D offset boosting, which brings the possibility for the [...] Read more.
In this work, the polarity balance of a novel two-dimensional hyperchaotic map is considered, and thus the corresponding manifold of conditional symmetry is coined. The unique map has a simple structure but provides direct 2-D offset boosting, which brings the possibility for the construction of conditional symmetry by introducing an absolute value function. The corresponding evolution of the discrete sequences from the system is verified by the circuit implementation based on the microcontroller of CH32V307. The pseudorandom data from the map increases its adaptability for applications in information security. The hyperchaotic sequence-injected Ant Colony Optimization (ACO), Grey Wolf Optimizer (GWO), and Sparrow Search Algorithm (SSA) show their improved performance in the optimization algorithm. Robot path planning experiments confirm that all three algorithms exhibit superior convergence performance, global search capability, and path smoothness compared with the original algorithms. Full article
(This article belongs to the Section Engineering and Materials)
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28 pages, 12315 KB  
Article
DyVarMap: Integrating Conformational Dynamics and Interpretable Machine Learning for Cancer-Associated Missense Variant Classification in FGFR2
by Yiyang Lian and Amarda Shehu
Bioengineering 2026, 13(1), 126; https://doi.org/10.3390/bioengineering13010126 - 22 Jan 2026
Viewed by 157
Abstract
Accurate interpretation of missense variants in cancer-associated genes remains a critical challenge in precision oncology, as most sequence-based predictors lack mechanistic explanations. Receptor tyrosine kinases like FGFR2 exemplify this problem: their function depends on conformational dynamics, yet most variants remain classified as variants [...] Read more.
Accurate interpretation of missense variants in cancer-associated genes remains a critical challenge in precision oncology, as most sequence-based predictors lack mechanistic explanations. Receptor tyrosine kinases like FGFR2 exemplify this problem: their function depends on conformational dynamics, yet most variants remain classified as variants of uncertain significance (VUS). In this paper we present DyVarMap, an interpretable structural-learning framework that integrates AlphaFold2-based ensemble generation with physics-driven refinement, manifold learning, and supervised classification using five biophysically motivated geometric features. Applied to FGFR2, the framework generates diverse conformational ensembles, identifies metastable states through nonlinear dimensionality reduction, and classifies pathogenicity while providing mechanistic attributions via SHAP analysis. External validation on ten kinase-domain variants yields an AUROC of 0.77 with superior calibration (Brier score = 0.108) compared to PolyPhen-2 (0.125) and AlphaMissense (0.132). Feature importance analysis consistently identifies K659–E565 salt-bridge distance and DFG motif dihedral angles as top predictors, directly linking predictions to known activation mechanisms. Case studies of borderline variants (A628T, E608K, L618F) demonstrate the framework’s ability to provide structurally coherent mechanistic explanations. DyVarMap bridges the gap between static structure prediction and dynamics-aware functional assessment, generating testable hypotheses for experimental validation and demonstrating the value of incorporating conformational dynamics into variant effect prediction for precision oncology. Full article
(This article belongs to the Special Issue Machine Learning in Precision Oncology: Innovations and Applications)
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