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Keywords = early and late senescence phenotype

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22 pages, 17808 KiB  
Article
Transcriptomic Changes During the Replicative Senescence of Human Articular Chondrocytes
by Aysegul Atasoy-Zeybek, Gresin P. Hawse, Christopher V. Nagelli, Consuelo M. Lopez De Padilla, Matthew P. Abdel and Christopher H. Evans
Int. J. Mol. Sci. 2024, 25(22), 12130; https://doi.org/10.3390/ijms252212130 - 12 Nov 2024
Cited by 1 | Viewed by 1430
Abstract
Aging is a major risk factor for osteoarthritis (OA), but the specific mechanisms connecting aging and OA remain unclear. Although chondrocytes rarely divide in adult articular cartilage, they undergo replicative senescence in vitro, offering a model to study aging-related changes under controlled conditions. [...] Read more.
Aging is a major risk factor for osteoarthritis (OA), but the specific mechanisms connecting aging and OA remain unclear. Although chondrocytes rarely divide in adult articular cartilage, they undergo replicative senescence in vitro, offering a model to study aging-related changes under controlled conditions. OA cartilage was obtained from an 80-year-old male and a 72-year-old female, while normal cartilage was sourced from a 26-year-old male. Chondrocyte cultures were established and sub-cultured to their Hayflick limit. Bulk RNA sequencing on early- and late-passage human articular chondrocytes identified transcriptomic changes associated with cellular aging. Early-passage OA chondrocytes already showed senescent phenotypes, unlike normal chondrocytes. All three cultures underwent 30 population doublings before replicative exhaustion, at which point all cells displayed senescence. During this process, cells lost their ability to form cartilaginous pellets. Differential gene expression analysis revealed distinct transcriptomic profiles between early- and late-passage chondrocytes and between normal and OA-derived cells. Genes related to matrix synthesis, degradation, inflammation, and the senescence-associated secretory phenotype (SASP) showed significant expression changes. Despite being a small pilot study, these findings suggest that further research into the molecular and metabolic changes during chondrocyte senescence could provide valuable insights into OA pathobiology. Full article
(This article belongs to the Section Molecular Biology)
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21 pages, 4327 KiB  
Article
Effects of Blood-Derived Products on Cellular Senescence and Inflammatory Response: A Study on Skin Rejuvenation
by Harald Kühnel, Markus Pasztorek, Olga Kuten-Pella, Karina Kramer, Christoph Bauer, Zsombor Lacza and Stefan Nehrer
Curr. Issues Mol. Biol. 2024, 46(3), 1865-1885; https://doi.org/10.3390/cimb46030122 - 28 Feb 2024
Cited by 2 | Viewed by 2430
Abstract
Blood-derived products, such as citrate platelet-rich plasma (CPRP) and hyperacute serum (HAS), are recognized for their rich growth factor content. When human dermal fibroblast (HDF) cells are exposed to combined mitogenic and DNA-damaging stimuli, it can lead to an increased burden of senescent [...] Read more.
Blood-derived products, such as citrate platelet-rich plasma (CPRP) and hyperacute serum (HAS), are recognized for their rich growth factor content. When human dermal fibroblast (HDF) cells are exposed to combined mitogenic and DNA-damaging stimuli, it can lead to an increased burden of senescent cells and a modified senescence-associated secretory phenotype. In this study, the senescent state was comprehensively assessed through various methods, including phosphorylated histone H2AX (γH2AX) staining, p21 and p16 q-PCR, p21-western blot, growth curves, and senescence-associated ß-galactosidase staining. Two primary treatments with blood products were administered, one early (immediately after etoposide) and the other late (11 days after etoposide treatment). The effects of the blood product treatment were evaluated by measuring interleukin 6 and 8 (IL-6 and IL-8) levels, as well as collagen 1 (COL1) and p21 mRNA expression. Additionally, 2,3-bis-(2-methoxy-4-nitro-5-sulfophenyl)-2H-tetrazolium-5-carboxanilide (XTT) assays, cell size measurements, viability assays, and cell number calculations were conducted. The results revealed that cells treated with hyperacute serum in the early treatment phase exhibited the lowest observed IL-6 and IL-8 levels. In contrast, a clear inflammatory response for IL-8 was observed in cells treated with hyperacute serum and citrate platelet-rich plasma during the late treatment. Furthermore, an upregulation of COL1 expression was observed in the early treatment, while cells in the late treatment group remained unaffected. Notably, citrate platelet-rich plasma-treated cells showed a decrease in COL1 expression. Overall, the treatment with blood products appears to have slightly positive effects on skin rejuvenation. Full article
(This article belongs to the Section Biochemistry, Molecular and Cellular Biology)
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16 pages, 4952 KiB  
Article
Biological Effects of “Inflammageing” on Human Oral Cells: Insights into a Potential Confounder of Age-Related Diseases
by Elli Alexakou, Athina Bakopoulou, Danae A. Apatzidou, Aristeidis Kritis, Andigoni Malousi and Vassiliki Anastassiadou
Int. J. Mol. Sci. 2024, 25(1), 5; https://doi.org/10.3390/ijms25010005 - 19 Dec 2023
Cited by 3 | Viewed by 2218
Abstract
Objectives: The term “inflammageing” describes the process of inflammation-induced aging that leads living cells to a state of permanent cell cycle arrest due to chronic antigenic irritation. This in vitro study aimed to shed light on the mechanisms of “inflammageing” on human oral [...] Read more.
Objectives: The term “inflammageing” describes the process of inflammation-induced aging that leads living cells to a state of permanent cell cycle arrest due to chronic antigenic irritation. This in vitro study aimed to shed light on the mechanisms of “inflammageing” on human oral cells. Methods: Primary cultures of human gingival fibroblasts (hGFs) were exposed to variable pro-inflammatory stimuli, including lipopolysaccharide (LPS), Tumor Necrosis Factor-alpha (TNFa), and gingival crevicular fluid (GCF) collected from active periodontal pockets of systemically healthy patients. Inflammageing was studied through two experimental models, employing either late-passage (“aged”) cells (p. 10) that were exposed to the pro-inflammatory stimuli or early-passage (“young”) cells (p. 1) continuously exposed during a period of several passages (up to p. 10) to the above-mentioned stimuli. Cells were evaluated for the expression of beta-galactosidase activity (histochemical staining), senescence-associated genes (qPCR analysis), and biomarkers related to a Senescence-Associated Secretory Phenotype (SASP), through proteome profile analysis and bioinformatics. Results: A significant increase (p < 0.05) in beta-galactosidase-positive cells was observed after exposure to each pro-inflammatory stimulus. The senescence-associated gene expression included upregulation for CCND1 and downregulation for SUSD6, and STAG1, a profile typical for cellular senescence. Overall, pro-inflammatory priming of late-passage cells caused more pronounced effects in terms of senescence than long-term exposure of early-passage cells to these stimuli. Proteomic analysis showed induction of SASP, evidenced by upregulation of several pro-inflammatory proteins (IL-6, IL-10, IL-16, IP-10, MCP-1, MCP-2, M-CSF, MIP-1a, MIP-1b, TNFb, sTNF-RI, sTNF-RII, TIMP-2) implicated in cellular aging and immune responses. The least potent impact on the induction of SASP was provoked by LPS and the most pronounced by GCF. Conclusion: This study demonstrates that long-term exposure of hGFs to various pro-inflammatory signals induced or accelerated cellular senescence with the most pronounced impact noted for the late-passage cells. The outcome of these analyses provides insights into oral chronic inflammation as a potential confounder of age-related diseases. Full article
(This article belongs to the Special Issue Molecular Advances in Dental Pulp Tissue Engineering, 2nd Edition)
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20 pages, 5163 KiB  
Article
Nicotinamide Mononucleotide Supplementation Improves Mitochondrial Dysfunction and Rescues Cellular Senescence by NAD+/Sirt3 Pathway in Mesenchymal Stem Cells
by Huan Wang, Yanan Sun, Chenchen Pi, Xiao Yu, Xingyu Gao, Chang Zhang, Hui Sun, Haiying Zhang, Yingai Shi and Xu He
Int. J. Mol. Sci. 2022, 23(23), 14739; https://doi.org/10.3390/ijms232314739 - 25 Nov 2022
Cited by 46 | Viewed by 8565
Abstract
In vitro expansion-mediated replicative senescence has severely limited the clinical applications of mesenchymal stem cells (MSCs). Accumulating studies manifested that nicotinamide adenine dinucleotide (NAD+) depletion is closely related to stem cell senescence and mitochondrial metabolism disorder. Promoting NAD+ level is [...] Read more.
In vitro expansion-mediated replicative senescence has severely limited the clinical applications of mesenchymal stem cells (MSCs). Accumulating studies manifested that nicotinamide adenine dinucleotide (NAD+) depletion is closely related to stem cell senescence and mitochondrial metabolism disorder. Promoting NAD+ level is considered as an effective way to delay aging. Previously, we have confirmed that nicotinamide mononucleotide (NMN), a precursor of NAD+, can alleviate NAD+ deficiency-induced MSC senescence. However, whether NMN can attenuate MSC senescence and its underlying mechanisms are still incompletely clear. The present study herein showed that late passage (LP) MSCs displayed lower NAD+ content, reduced Sirt3 expression and mitochondrial dysfunction. NMN supplementation leads to significant increase in intracellular NAD+ level, NAD+/ NADH ratio, Sirt3 expression, as well as ameliorated mitochondrial function and rescued senescent MSCs. Additionally, Sirt3 over-expression relieved mitochondrial dysfunction, and retrieved senescence-associated phenotypic features in LP MSCs. Conversely, inhibition of Sirt3 activity via a selective Sirt3 inhibitor 3-TYP in early passage (EP) MSCs resulted in aggravated cellular senescence and abnormal mitochondrial function. Furthermore, NMN administration also improves 3-TYP-induced disordered mitochondrial function and cellular senescence in EP MSCs. Collectively, NMN replenishment alleviates mitochondrial dysfunction and rescues MSC senescence through mediating NAD+/Sirt3 pathway, possibly providing a novel mechanism for MSC senescence and a promising strategy for anti-aging pharmaceuticals. Full article
(This article belongs to the Special Issue Mitochondria at the Heart of Metabolic Disorders)
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20 pages, 4566 KiB  
Article
Regorafenib Induces Senescence and Epithelial-Mesenchymal Transition in Colorectal Cancer to Promote Drug Resistance
by Pashalina Kehagias, Nadège Kindt, Mohammad Krayem, Ahmad Najem, Giulia Agostini, Elena Acedo Reina, Giacomo Bregni, Francesco Sclafani, Fabrice Journe, Ahmad Awada, Ghanem E. Ghanem and Alain Hendlisz
Cells 2022, 11(22), 3663; https://doi.org/10.3390/cells11223663 - 18 Nov 2022
Cited by 9 | Viewed by 3359
Abstract
Potential intrinsic resistance mechanisms to regorafenib were explored after short exposure (3 days) on five CRC cell lines (HCT-116, SW1116, LS-1034, SW480, Caco-2). The observation of senescence-like features led to the investigation of a drug-initiated phenotype switch. Following long-term exposure (12 months) of [...] Read more.
Potential intrinsic resistance mechanisms to regorafenib were explored after short exposure (3 days) on five CRC cell lines (HCT-116, SW1116, LS-1034, SW480, Caco-2). The observation of senescence-like features led to the investigation of a drug-initiated phenotype switch. Following long-term exposure (12 months) of HCT-116 and SW480 cell lines to regorafenib, we developed resistant models to explore acquired resistance. SW480 cells demonstrated senescent-like properties, including a cell arrest in the late G2/prophase cell cycle stage and a statistically significant decrease in the expression of G1 Cyclin-Dependent Kinase inhibitors and key cell cycle regulators. A specific senescence-associated secretome was also observed. In contrast, HCT-116 treated cells presented early senescent features and developed acquired resistance triggering EMT and a more aggressive phenotype over time. The gained migration and invasion ability by long-exposed cells was associated with the increased expression level of key cellular and extracellular EMT-related factors. The PI3K/AKT pathway was a significant player in the acquired resistance of HCT-116 cells, possibly related to a PI3KCA mutation in this cell line. Our findings provide new insights into the phenotypic plasticity of CRC cells able, under treatment pressure, to acquire a stable TIS or to use an early senescence state to undergo EMT. Full article
(This article belongs to the Special Issue Innovative Drug Treatment of Cancer Cells)
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21 pages, 4273 KiB  
Article
An Agent-Based Model of Radiation-Induced Lung Fibrosis
by Nicolò Cogno, Roman Bauer and Marco Durante
Int. J. Mol. Sci. 2022, 23(22), 13920; https://doi.org/10.3390/ijms232213920 - 11 Nov 2022
Cited by 10 | Viewed by 3347
Abstract
Early- and late-phase radiation-induced lung injuries, namely pneumonitis and lung fibrosis (RILF), severely constrain the maximum dose and irradiated volume in thoracic radiotherapy. As the most radiosensitive targets, epithelial cells respond to radiation either by undergoing apoptosis or switching to a senescent phenotype [...] Read more.
Early- and late-phase radiation-induced lung injuries, namely pneumonitis and lung fibrosis (RILF), severely constrain the maximum dose and irradiated volume in thoracic radiotherapy. As the most radiosensitive targets, epithelial cells respond to radiation either by undergoing apoptosis or switching to a senescent phenotype that triggers the immune system and damages surrounding healthy cells. Unresolved inflammation stimulates mesenchymal cells’ proliferation and extracellular matrix (ECM) secretion, which irreversibly stiffens the alveolar walls and leads to respiratory failure. Although a thorough understanding is lacking, RILF and idiopathic pulmonary fibrosis share multiple pathways and would mutually benefit from further insights into disease progression. Furthermore, current normal tissue complication probability (NTCP) models rely on clinical experience to set tolerance doses for organs at risk and leave aside mechanistic interpretations of the undergoing processes. To these aims, we implemented a 3D agent-based model (ABM) of an alveolar duct that simulates cell dynamics and substance diffusion following radiation injury. Emphasis was placed on cell repopulation, senescent clearance, and intra/inter-alveolar bystander senescence while tracking ECM deposition. Our ABM successfully replicates early and late fibrotic response patterns reported in the literature along with the ECM sigmoidal dose-response curve. Moreover, surrogate measures of RILF severity via a custom indicator show qualitative agreement with published fibrosis indices. Finally, our ABM provides a fully mechanistic alveolar survival curve highlighting the need to include bystander damage in lung NTCP models. Full article
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17 pages, 5233 KiB  
Article
High-Throughput Plant Phenotyping (HTPP) in Resource-Constrained Research Programs: A Working Example in Ghana
by Yussif Baba Kassim, Richard Oteng-Frimpong, Doris Kanvenaa Puozaa, Emmanuel Kofi Sie, Masawudu Abdul Rasheed, Issah Abdul Rashid, Agyemang Danquah, Darlington A. Akogo, James Rhoads, David Hoisington, Mark D. Burow and Maria Balota
Agronomy 2022, 12(11), 2733; https://doi.org/10.3390/agronomy12112733 - 4 Nov 2022
Cited by 10 | Viewed by 3191
Abstract
In this paper, we present a procedure for implementing field-based high-throughput plant phenotyping (HTPP) that can be used in resource-constrained research programs. The procedure relies on opensource tools with the only expensive item being one-off purchase of a drone. It includes acquiring images [...] Read more.
In this paper, we present a procedure for implementing field-based high-throughput plant phenotyping (HTPP) that can be used in resource-constrained research programs. The procedure relies on opensource tools with the only expensive item being one-off purchase of a drone. It includes acquiring images of the field of interest, stitching the images to get the entire field in one image, calculating and extracting the vegetation indices of the individual plots, and analyzing the extracted indices according to the experimental design. Two populations of groundnut genotypes with different maturities were evaluated for their reaction to early and late leaf spot (ELS, LLS) diseases under field conditions in 2020 and 2021. Each population was made up of 12 genotypes in 2020 and 18 genotypes in 2021. Evaluation of the genotypes was done in four locations in each year. We observed a strong correlation between the vegetation indices and the area under the disease progress curve (AUDPC) for ELS and LLS. However, the strength and direction of the correlation depended upon the time of disease onset, level of tolerance among the genotypes and the physiological traits the vegetation indices were associated with. In 2020, when the disease was observed to have set in late in medium duration population, at the beginning of the seed stage (R5), normalized green-red difference index (NGRDI) and variable atmospheric resistance index (VARI) derived at the beginning pod stage (R3) had a positive relationship with the AUDPC for ELS, and LLS. On the other hand, NGRDI and VARI derived from images taken at R5, and physiological maturity (R7) had negative relationships with AUDPC for ELS, and LLS. In 2021, when the disease was observed to have set in early (at R3) also in medium duration population, a negative relationship was observed between NGRDI and VARI and AUDPC for ELS and LLS, respectively. We found consistently negative relationships of NGRDI and VARI with AUDPC for ELS and LLS, respectively, within the short duration population in both years. Canopy cover (CaC), green area (GA), and greener area (GGA) only showed negative relationships with AUDPC for ELS and LLS when the disease caused yellowing and defoliation. The rankings of some genotypes changed for NGRDI, VARI, CaC, GA, GGA, and crop senescence index (CSI) when lesions caused by the infections of ELS and LLS became severe, although that did not affect groupings of genotypes when analyzed with principal component analysis. Notwithstanding, genotypes that consistently performed well across various reproductive stages with respect to the vegetation indices constituted the top performers when ELS, LLS, haulm, and pod yields were jointly considered. Full article
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17 pages, 4819 KiB  
Article
Paracrine Senescence of Mesenchymal Stromal Cells Involves Inflammatory Cytokines and the NF-κB Pathway
by Lun-Yin Chou, Chun-Te Ho and Shih-Chieh Hung
Cells 2022, 11(20), 3324; https://doi.org/10.3390/cells11203324 - 21 Oct 2022
Cited by 27 | Viewed by 3140
Abstract
It has been known that senescence-associated secretory phenotype (SASP) triggers senescence of the surrounding normal cells. However, SASP signaling regarding mesenchymal stromal cell aging remains to be fully elucidated. Therefore, the present study aimed to clarify the molecular mechanism of late (passage) MSC-induced [...] Read more.
It has been known that senescence-associated secretory phenotype (SASP) triggers senescence of the surrounding normal cells. However, SASP signaling regarding mesenchymal stromal cell aging remains to be fully elucidated. Therefore, the present study aimed to clarify the molecular mechanism of late (passage) MSC-induced paracrine SASP-mediated senescence of early (passage) MSCs during ex vivo expansion. Here, we conducted an extensive characterization of senescence features in bone-marrow (BM)-derived MSCs from healthy human donors. Late MSCs displayed an enlarged senescent-like morphology, induced SASP-related proinflammatory cytokines (IL-1α and IL-8), and reduced clonogenic capacity and osteogenic differentiation when compared to early MSCs. Of note, paracrine effects of SASP-related IL-1α and IL-8 from late MSCs induced cellular senescence of early MSCs via an NF-κB-dependent manner. Moreover, cellular senescence of early MSCs was promoted by the synergistic action of IL-1α and IL-8. However, inhibition of NF-κB by shRNA transfection or using inhibitors in early MSCs blocked early MSCs cellular senescence caused by paracrine SASP of late MSCs. In conclusion, these findings reveal that late MSCs display features of senescence and that, during ex vivo expansion, SASP-related proinflammatory cytokines contribute to activate a cellular senescence program in early MSCs that may ultimately impair their functionality. Full article
(This article belongs to the Special Issue Cellular Plasticity in Ageing)
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21 pages, 17636 KiB  
Article
Arabidopsis Ubiquitin-Conjugating Enzymes UBC4, UBC5, and UBC6 Have Major Functions in Sugar Metabolism and Leaf Senescence
by Sheng Wang, Ling Cao, Ian R. Willick, Hong Wang and Karen K. Tanino
Int. J. Mol. Sci. 2022, 23(19), 11143; https://doi.org/10.3390/ijms231911143 - 22 Sep 2022
Cited by 4 | Viewed by 3083
Abstract
The ubiquitin-conjugating enzyme (E2) is required for protein ubiquitination. Arabidopsis has 37 E2s grouped into 14 subfamilies and the functions for many of them are unknown. We utilized genetic and biochemical methods to study the roles of Arabidopsis UBC4, UBC5, and UBC6 of [...] Read more.
The ubiquitin-conjugating enzyme (E2) is required for protein ubiquitination. Arabidopsis has 37 E2s grouped into 14 subfamilies and the functions for many of them are unknown. We utilized genetic and biochemical methods to study the roles of Arabidopsis UBC4, UBC5, and UBC6 of the E2 subfamily IV. The Arabidopsis ubc4/5/6 triple mutant plants had higher levels of glucose, sucrose, and starch than the control plants, as well as a higher protein level of a key gluconeogenic enzyme, cytosolic fructose 1,6-bisphosphatase 1 (cyFBP). In an in vitro assay, the proteasome inhibitor MG132 inhibited the degradation of recombinant cyFBP whereas ATP promoted cyFBP degradation. In the quadruple mutant ubc4/5/6 cyfbp, the sugar levels returned to normal, suggesting that the increased sugar levels in the ubc4/5/6 mutant were due to an increased cyFBPase level. In addition, the ubc4/5/6 mutant plants showed early leaf senescence at late stages of plant development as well as accelerated leaf senescence using detached leaves. Further, the leaf senescence phenotype remained in the quadruple ubc4/5/6 cyfbp mutant. Our results suggest that UBC4/5/6 have two lines of important functions, in sugar metabolism through regulating the cyFBP protein level and in leaf senescence likely through a cyFBP-independent mechanism. Full article
(This article belongs to the Section Molecular Plant Sciences)
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25 pages, 3848 KiB  
Article
Metformin Protects against Radiation-Induced Acute Effects by Limiting Senescence of Bronchial-Epithelial Cells
by Christine Hansel, Samantha Barr, Alina V. Schemann, Kirsten Lauber, Julia Hess, Kristian Unger, Horst Zitzelsberger, Verena Jendrossek and Diana Klein
Int. J. Mol. Sci. 2021, 22(13), 7064; https://doi.org/10.3390/ijms22137064 - 30 Jun 2021
Cited by 28 | Viewed by 4701
Abstract
Radiation-induced damage to normal lung parenchyma remains a dose-limiting factor in thorax-associated radiotherapy (RT). Severe early and late complications with lungs can increase the risk of morbidity in cancer patients after RT. Herein, senescence of lung epithelial cells following RT-induced cellular stress, or [...] Read more.
Radiation-induced damage to normal lung parenchyma remains a dose-limiting factor in thorax-associated radiotherapy (RT). Severe early and late complications with lungs can increase the risk of morbidity in cancer patients after RT. Herein, senescence of lung epithelial cells following RT-induced cellular stress, or more precisely the respective altered secretory profile, the senescence-associated secretory phenotype (SASP), was suggested as a central process for the initiation and progression of pneumonitis and pulmonary fibrosis. We previously reported that abrogation of certain aspects of the secretome of senescent lung cells, in particular, signaling inhibition of the SASP-factor Ccl2/Mcp1 mediated radioprotection especially by limiting endothelial dysfunction. Here, we investigated the therapeutic potential of a combined metformin treatment to protect normal lung tissue from RT-induced senescence and associated lung injury using a preclinical mouse model of radiation-induced pneumopathy. Metformin treatment efficiently limited RT-induced senescence and SASP expression levels, thereby limiting vascular dysfunctions, namely increased vascular permeability associated with increased extravasation of circulating immune and tumor cells early after irradiation (acute effects). Complementary in vitro studies using normal lung epithelial cell lines confirmed the senescence-limiting effect of metformin following RT finally resulting in radioprotection, while fostering RT-induced cellular stress of cultured malignant epithelial cells accounting for radiosensitization. The radioprotective action of metformin for normal lung tissue without simultaneous protection or preferable radiosensitization of tumor tissue might increase tumor control probabilities and survival because higher radiation doses could be used. Full article
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14 pages, 3577 KiB  
Article
Plant-Derived Molecules α-Boswellic Acid Acetate, Praeruptorin-A, and Salvianolic Acid-B Have Age-Related Differential Effects in Young and Senescent Human Fibroblasts In Vitro
by Anna Lewinska, Lakshman Sodagam, Dominika Bloniarz, Karsten Siems, Maciej Wnuk and Suresh I. S. Rattan
Molecules 2020, 25(1), 141; https://doi.org/10.3390/molecules25010141 - 29 Dec 2019
Cited by 5 | Viewed by 3685
Abstract
Testing and screening of plant-derived molecules on normal human cells in vitro is a widely used approach for discovering their eventual health beneficial effects for human ageing and longevity. As little is known about age-associated differential effects of such molecules, here we report [...] Read more.
Testing and screening of plant-derived molecules on normal human cells in vitro is a widely used approach for discovering their eventual health beneficial effects for human ageing and longevity. As little is known about age-associated differential effects of such molecules, here we report that young (<25% replicative lifespan completed) and near-senescent (>90% replicative lifespan completed) human skin fibroblasts exposed for 1–15 days to a wide range of concentrations (0.1–100 μM) of the three selected phytochemicals, namely α-boswellic acid acetate (ABC), praeruptorin-A (PTA), and salvianolic acid-B (SAB) had age-related differential effects. The parameters studied were the metabolic activity (MTT assay), cellular morphological phenotype, one-step growth characteristics, expression of genes involved in the cell cycle regulation and cytokine network genes, protein levels of p53, cytosolic superoxide dismutase (SOD1) and microtubule-associated protein 1A/1B-light chain 3 (LC3), and the extent of protein carbonylation and protein aggregation as a sign of oxidative stress. All three compounds showed biphasic hormetic dose response by stimulating cell growth, survival and metabolic activity at low doses (up to 1 μM), while showing inhibitory effects at high doses (>10 μM). Furthermore, the response of early passage young cells was different from that of the late passage near-senescent cells, especially with respect to the expression of cell cycle-related and inflammation-related genes. Such studies have importance with respect to the use of low doses of such molecules as health-promoting and/or ageing-interventions through the phenomenon of hormesis. Full article
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24 pages, 3447 KiB  
Article
Effect of Senescence Phenotypes and Nitrate Availability on Wheat Leaf Metabolome during Grain Filling
by Elmien Heyneke, Mutsumi Watanabe, Alexander Erban, Guangyou Duan, Peter Buchner, Dirk Walther, Joachim Kopka, Malcolm John Hawkesford and Rainer Hoefgen
Agronomy 2019, 9(6), 305; https://doi.org/10.3390/agronomy9060305 - 11 Jun 2019
Cited by 9 | Viewed by 5737
Abstract
The capacity for optimising grain yield depends largely on the timing of senescence and the processes underlying efficient remobilisation and cycling of nutrients from source tissues to the developing grain. This study describes how metabolism is adjusted during senescence in response to varying [...] Read more.
The capacity for optimising grain yield depends largely on the timing of senescence and the processes underlying efficient remobilisation and cycling of nutrients from source tissues to the developing grain. This study describes how metabolism is adjusted during senescence in response to varying nitrogen application rates after anthesis. A comprehensive metabolite analysis was performed in field-grown Avalon/Cadenza using segregating doubled haploid wheat genotypes having contrasting traits relating to timing of the onset of senescence. Correlative matrices of metabolites and yield parameters determined the metabolic networks that underlie these phenotypes, and were helpful for identifying unique metabolites that are indicative of timing of senescence. They also revealed robust correlations between steady increases in hexose levels, a late senescence phenotype and high straw yield associated with low N fertiliser levels. Tryptophan, cis-aconitate, phosphate and 1-kestose demonstrated strong perturbations in response to nitrogen availability and progression towards developmental senescence. A comprehensive metabolic map of wheat leaf primary metabolites yielded a cumulative readout of processes that occur during developmental ripening and contribute to grain filling in plants with differential senescence timing. Full article
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17 pages, 2688 KiB  
Article
Differentiation and Non-Linear Responses in Temporal Phenotypic Plasticity of Seasonal Phenophases in a Common Garden of Crataegus monogyna Jacq.
by Kristine Vander Mijnsbrugge and Astrid Janssens
Forests 2019, 10(4), 293; https://doi.org/10.3390/f10040293 - 27 Mar 2019
Cited by 9 | Viewed by 3202
Abstract
Phenology in perennial plants implies the temporal occurrence of biological events throughout the year. Heritable phenotypic plasticity in the timing of the phenophases can be of importance in the adaptation of woody species to a quickly changing environment. We observed the timing of [...] Read more.
Phenology in perennial plants implies the temporal occurrence of biological events throughout the year. Heritable phenotypic plasticity in the timing of the phenophases can be of importance in the adaptation of woody species to a quickly changing environment. We observed the timing of bud burst, flower opening, leaf senescence and leaf fall in two successive years in a common garden of Crataegus monogyna Jacq. in Belgium, consisting of six local and five non-local provenances. Data were processed with cumulative logistic mixed models. Strong auto-correlation was present among the spring phenophases as well as among the autumnal phenophases, with spring phenophases being negatively correlated with fall phenophases. The strongest between-provenance differentiation was found for the timing of bud burst in spring, followed by flower opening and finally by leaf senescence and leaf fall. Warmer spring temperatures in March 2017 advanced the timing of bud burst, and to a lesser extent of flower opening, in all provenances compared to 2016. However, the advancement was non-linear among the provenances, with the lower latitude provenances being relatively less early and the higher elevation provenances being more late than the local provenances in this year. It can be hypothesized that non-local provenances display larger temporal phenotypic plastic responses in the timing of their spring phenophases compared to local provenances when temperatures in the common garden deviate more from their home-sites. Full article
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9 pages, 211 KiB  
Review
Biomarkers for Detecting Mitochondrial Disorders
by Josef Finsterer and Sinda Zarrouk-Mahjoub
J. Clin. Med. 2018, 7(2), 16; https://doi.org/10.3390/jcm7020016 - 30 Jan 2018
Cited by 32 | Viewed by 8428
Abstract
(1) Objectives: Mitochondrial disorders (MIDs) are a genetically and phenotypically heterogeneous group of slowly or rapidly progressive disorders with onset from birth to senescence. Because of their variegated clinical presentation, MIDs are difficult to diagnose and are frequently missed in their early and [...] Read more.
(1) Objectives: Mitochondrial disorders (MIDs) are a genetically and phenotypically heterogeneous group of slowly or rapidly progressive disorders with onset from birth to senescence. Because of their variegated clinical presentation, MIDs are difficult to diagnose and are frequently missed in their early and late stages. This is why there is a need to provide biomarkers, which can be easily obtained in the case of suspecting a MID to initiate the further diagnostic work-up. (2) Methods: Literature review. (3) Results: Biomarkers for diagnostic purposes are used to confirm a suspected diagnosis and to facilitate and speed up the diagnostic work-up. For diagnosing MIDs, a number of dry and wet biomarkers have been proposed. Dry biomarkers for MIDs include the history and clinical neurological exam and structural and functional imaging studies of the brain, muscle, or myocardium by ultrasound, computed tomography (CT), magnetic resonance imaging (MRI), MR-spectroscopy (MRS), positron emission tomography (PET), or functional MRI. Wet biomarkers from blood, urine, saliva, or cerebrospinal fluid (CSF) for diagnosing MIDs include lactate, creatine-kinase, pyruvate, organic acids, amino acids, carnitines, oxidative stress markers, and circulating cytokines. The role of microRNAs, cutaneous respirometry, biopsy, exercise tests, and small molecule reporters as possible biomarkers is unsolved. (4) Conclusions: The disadvantages of most putative biomarkers for MIDs are that they hardly meet the criteria for being acceptable as a biomarker (missing longitudinal studies, not validated, not easily feasible, not cheap, not ubiquitously available) and that not all MIDs manifest in the brain, muscle, or myocardium. There is currently a lack of validated biomarkers for diagnosing MIDs. Full article
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