Search Results (7)

A joint analysis of dendrochronological and genomic data was performed to identify genetic mechanisms of adaptation and assess the adaptive genetic potential of Siberian stone pine (Pinus sibirica Du Tour) populations. The data obtained are necessary for predicting the effect of climate change and mitigating its negative consequences. Presented are the results of an association analysis of the variation of 84,853 genetic markers (single nucleotide polymorphisms—SNPs) obtained by double digest restriction-site associated DNA sequencing (ddRADseq) and 110 individual phenotypic traits, including dendrophenotypes based on the dynamics of tree-ring widths (TRWs) of 234 individual trees in six natural populations of Siberian stone pine, which have a history of extreme climatic stresses (e.g., droughts) and outbreaks of defoliators (e.g., pine sawfly [Neodiprion sertifer Geoff.]). The genetic structure of studied populations was relatively weak; samples are poorly differentiated and belong to genetically similar populations. Genotype–dendrophenotype associations were analyzed using three different approaches and corresponding models: General Linear Model (GLM), Bayesian Sparse Linear Mixed Model (BSLMM), and Bayesian-information and Linkage-disequilibrium Iteratively Nested Keyway (BLINK), respectively. Thirty SNPs were detected by at least two different approaches, and two SNPs by all three. In addition, three SNPs associated with mean values of recovery dendrophenotype (Rc) averaged across multiple years of climatic stresses were also found by all three methods. The sequences containing these SNPs were annotated using genome annotation of a very closely related species, whitebark pine (P. albicaulis Engelm.). We found that most of the SNPs with supposedly adaptive variation were located in intergenic regions. Three dendrophenotype-associated SNPs were located within the 10 Kbp regions and one in the intron of the genes encoding proteins that play a crucial role in ensuring the integrity of the plant’s genetic information, particularly under environmental stress conditions that can induce DNA damage. In addition, we found a correlation of individual heterozygosity with some dendrophenotypes. Heterosis was observed in most of these statistically significant cases; signs of homeostasis were also detected. Although most of the identified SNPs were not assigned to a particular gene, their high polymorphism and association with adaptive traits likely indicate high adaptive potential that can facilitate adaptation of Siberian stone pine populations to the climatic stresses and climate change. Full article

The characteristics of Abies sibirica Ledeb.- and Pinus sibirica Du Tour dominated forests stands in outbreak spots formed during a Dendrolimus sibiricus outbreak in 2014–2017 were studied at the stage of population collapse (east of the West Siberian Plain and western foothills of the Yenisei Range). The research was based on the data obtained during ground surveys conducted in 2016 when stands characteristics, the Siberian silk moth population density, and defoliation level were recorded. We classified the studied stands using decision trees and random forest algorithms to identify the key characteristics that determine the formation of outbreak spots. The classification results showed that the characteristics of the detected outbreak spots differ significantly from those previously described for dark coniferous stands of the southern taiga in Siberia. The highest probability of the outbreak spot occurrence in the study area was revealed for stands with the following characteristics: moderately moist site; Siberian stone pine and Siberian fir take 40% or more of stem volume; age of less than 105 years. Another group of forest stands under threat are those sharing the following characteristics: large area (more than 60 ha); stand homogeneity; ground vegetation is dominated by feather mosses; age of more than 120 years; Picea obovata Ledeb. takes a significant share in a stem volume. Such characteristics indicate that during the population collapse, the Siberian silk moth forms outbreak spots in stands that either undergo an early successional stage after previous outbreak or have been slightly damaged during the previous outbreaks due to unfavorable habitat conditions. Full article

Siberian stone pine (Pinus sibirica Du Tour) is one of the keystone conifers in Siberian taiga, but its radial growth is complacent and thus rarely investigated. We studied its growth in subalpine stands near the upper timberline along the Western Sayan Mountains, Southern Siberia, because climatic responses of trees growing on the boundaries of species distribution help us better understand their performance and prospects under climate change. We performed dendroclimatic analysis for six tree-ring width chronologies with significant between-site correlations at distances up to 270 km (r = 0.57–0.84, p < 0.05). We used ERA-20C (European Reanalysis of the Twentieth Century) daily climatic series to reveal weak but spatially coherent responses of tree growth to temperature and precipitation. Temperature stably stimulated growth during the period from the previous July–August to current August, except for an adverse effect in April. Precipitation suppressed growth during periods from the previous July–September to December (with reaction gradually strengthening) and from the current April to August (weakening), while the snowfall impact in January–March was neutral or positive. Weather extremes probably caused formation of wide tree rings in 1968 and 2002, but narrow rings in 1938, 1947, 1967, 1988, and 1997. A subtle increase in the climatic sensitivity of mature trees was observed for all significant seasonal climatic variables except for the temperature in the previous October–January. The current winter warming trend is supposedly advantageous for young pine trees based on their climatic response and observed elevational advance. Full article

The application of quantitative wood anatomy (QWA) in dendroclimatic analysis offers deep insight into the climatic effect on tree-ring formation, which is crucial in understanding the forests’ response to climate change. However, interrelations between tree-ring traits should be accounted to separate climatic signals recorded during subsequent stages of cell differentiation. The study was conducted in the South Siberian alpine timberline on Pinus sibirica Du Tour, a species considered unpromising in dendroclimatology. Relationships between tree-ring width, cell number N, mean and maximum values of radial diameter D, and cell wall thickness (CWT) were quantified to obtain indexed anatomical chronologies. Exponential functions with saturation D(N) and CWT(N) were proposed, which explained 14–69% and 3–61% of their variability, respectively. Indexation unabated significance of the climatic signals but separated them within a season. Analysis of pointer years and climatic extremes revealed predominantly long-term climatogenic changes of P. sibirica radial growth and QWA and allowed to obtain QWA-based 11-year filtered reconstructions of vegetative season climatic characteristics (R²_adj = 0.32–0.66). The revealed prevalence of low-frequency climatic reactions is probably explained by a strategy of slow accumulation and utilization of resources implemented by P. sibirica. It makes this species’ QWA a promising proxy for decadal climatic variations in various intra-seasonal timeframes. Full article

This research is dedicated to solving an urgent problem associated with the large-scale destruction of taiga forests by Siberian silk moth (Dendrolimus sibiricus) outbreaks. The dynamics of the damage to dark coniferous forest stands induced by the Siberian silk moth outbreaks in mid-altitude mountains were studied. A hypothesis was formulated based on the fundamental influence of the orography on the phytophage’s dispersal within the landscape, along with the climate, which acts as a secondary predictor—a catalyst for outbreaks. The study was carried out using Landsat−8 satellite imagery time-series (from 2018 to 2020). The data were verified using a field forest pathological survey of the territory. An assessment of the defoliated forest area and damage association with the landscape was carried out using an Advanced Spaceborne Thermal Emission and Reflection Radiometer (ASTER) digital elevation model. The assessment was aimed to detail the forecast parameters for an outbreak development in mid-altitude mountains using the orographic features—altitude, terrain slope, and slope aspect. Early warnings of phytophagous insect outbreaks in mountain southern taiga should be focused on the permanent monitoring of dark coniferous stands of the mossy group of forest types, covering altitude levels from 400 to 600 m, located on gentle terrains and slopes of up to 15 degrees. The greatest vulnerability to phytophage impacts was characterized as areas located at altitudes from 400 to 600 m. The upper limit of D. sibiricus distribution was 900 m above sea level. The results obtained provide comprehensive information on the Siberian silk moth potential reserves within the study area with the possibility of extrapolation to similar territories. The data will make it possible to model pest outbreaks based on orography and improve the forest pathological monitoring methods at the regional level. Full article

Understanding the contribution of forest ecosystems to regulating greenhouse gas emissions and maintaining the atmospheric CO₂ balance requires the accurate quantification of above-ground biomass (AGB) at the individual tree species level. The main objective of this study was to develop species-specific allometric equations for the total AGB and various biomass components, including stem, branch, and foliage biomass in Khangai region, northern Mongolia. We destructively sampled a total of 183 trees of five species (22–74 trees per species), including Siberian stone pine (Pinus sibirica Du Tour.), Asian white birch (Betula platyphylla Sukacz.), Mongolian poplar (Populus suaveolens Fisch.), Siberian spruce (Picea obovata Ldb.), and Siberian larch (Larix sibirica Ldb.), across this region. The results showed that for the five species, the average biomass proportion for the stems was 75%, followed by branches at 20% and foliage at 5%. The species-specific component and total AGB models for the Khangai region were developed using tree diameter at breast height (D) and D² and tree height (H) combined ( ${\mathrm{D}}^2\mathrm{H}$ ); and both D and H were used as independent variables. The best allometric model was lnŶ = lna + b × lnD + c × lnH for the various components and total AGB of B. platyphylla and L. sibirica, for the stems and total AGB of P. suaveolens, and for the stem and branch biomass of P. obovata. The equation lnŶ = lna + b × ln( ${\mathrm{D}}^2\times \mathrm{H}$ ) was best for the various components and total AGB of P. sibirica, for the branch and foliage biomass of P. suaveolens, and for AGB of P. obovata. The equation lnŶ = lna + b × ln(D) was best only for the foliage biomass of P. obovata. Our results highlight that developing species-specific tree AGB models is very important for accurately estimating the biomass in the Khangai forest region of Mongolia. Our biomass models will be used at the tree level inventories with sample plots in the Khangai forest region. Full article