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Keywords = SQUAM

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17 pages, 3060 KB  
Article
Use of D-Squame® as a Minimally Invasive Technique to Evaluate Skin Immune Response Biomarkers in Canine Atopic Dermatitis
by Marion Mosca, Nadège Milhau, Mélanie Legain, Adrien Idée, Xavier Langon and Didier Pin
Vet. Sci. 2025, 12(1), 4; https://doi.org/10.3390/vetsci12010004 - 28 Dec 2024
Cited by 3 | Viewed by 3185
Abstract
Evaluation of skin inflammation biomarkers in canine atopic dermatitis (AD) currently requires skin biopsies. Tape stripping has been shown to be a reliable technique to study biomarkers in the stratum corneum (SC) in humans. The aim of this study was to assess the [...] Read more.
Evaluation of skin inflammation biomarkers in canine atopic dermatitis (AD) currently requires skin biopsies. Tape stripping has been shown to be a reliable technique to study biomarkers in the stratum corneum (SC) in humans. The aim of this study was to assess the immune response and identify biomarkers in the SC of dogs with canine AD using D-squame® as a minimally invasive technique. Eight beagle dogs were epicutaneously sensitized to Dermatophagoides farinae extract after tape stripping on sensitized site (S); twice a week for 49 days. Two sites were determined: lesional site (L) and non-lesional site (NL) on eight dogs affected spontaneously with AD. Adhesive tape strips D-Squame® were applied on each site. Skin concentrations of 10 cytokines were analyzed with an ELISA kit. Our results revealed a significant increase of IL-13, IL-4, and TNF-α concentrations in S and L sites. Regarding IFN-γ, its concentration was significantly increased in L skin and increased but not significantly in S sites. All the alarmins were not differentially expressed except IL-33 in the S site. IL-31, IL-1β, and IL-10 were not detectable. D-squame® seems to be a suitable technique to extract inflammatory cytokines from the SC of dogs, and IL-13, IL-4, TNF-α, and IFN-γ could be interesting biomarkers of canine AD. Full article
(This article belongs to the Section Veterinary Biomedical Sciences)
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18 pages, 638 KB  
Review
The Importance of Artificial Intelligence in Upper Gastrointestinal Endoscopy
by Dusan Popovic, Tijana Glisic, Tomica Milosavljevic, Natasa Panic, Marija Marjanovic-Haljilji, Dragana Mijac, Milica Stojkovic Lalosevic, Jelena Nestorov, Sanja Dragasevic, Predrag Savic and Branka Filipovic
Diagnostics 2023, 13(18), 2862; https://doi.org/10.3390/diagnostics13182862 - 5 Sep 2023
Cited by 16 | Viewed by 4010
Abstract
Recently, there has been a growing interest in the application of artificial intelligence (AI) in medicine, especially in specialties where visualization methods are applied. AI is defined as a computer’s ability to achieve human cognitive performance, which is accomplished through enabling computer “learning”. [...] Read more.
Recently, there has been a growing interest in the application of artificial intelligence (AI) in medicine, especially in specialties where visualization methods are applied. AI is defined as a computer’s ability to achieve human cognitive performance, which is accomplished through enabling computer “learning”. This can be conducted in two ways, as machine learning and deep learning. Deep learning is a complex learning system involving the application of artificial neural networks, whose algorithms imitate the human form of learning. Upper gastrointestinal endoscopy allows examination of the esophagus, stomach and duodenum. In addition to the quality of endoscopic equipment and patient preparation, the performance of upper endoscopy depends on the experience and knowledge of the endoscopist. The application of artificial intelligence in endoscopy refers to computer-aided detection and the more complex computer-aided diagnosis. The application of AI in upper endoscopy is aimed at improving the detection of premalignant and malignant lesions, with special attention on the early detection of dysplasia in Barrett’s esophagus, the early detection of esophageal and stomach cancer and the detection of H. pylori infection. Artificial intelligence reduces the workload of endoscopists, is not influenced by human factors and increases the diagnostic accuracy and quality of endoscopic methods. Full article
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7 pages, 5073 KB  
Brief Report
Macroscopic Skin Examination Can Determine the Number of Strips Necessary to Study the stratum corneum in Dogs
by Marion Mosca, Mélanie Legain, Guillaume Noël, Adrien Idée and Didier Pin
Vet. Sci. 2023, 10(9), 547; https://doi.org/10.3390/vetsci10090547 - 1 Sep 2023
Cited by 5 | Viewed by 3107
Abstract
To evaluate the skin barrier, the stratum corneum (SC) must be isolated and extracted. Currently, skin biopsy is the gold standard method to investigate skin immunology and the presence of biomarkers in dogs. However, a standardized, non-invasive tool to exclusively remove the SC [...] Read more.
To evaluate the skin barrier, the stratum corneum (SC) must be isolated and extracted. Currently, skin biopsy is the gold standard method to investigate skin immunology and the presence of biomarkers in dogs. However, a standardized, non-invasive tool to exclusively remove the SC would be of great interest to study healthy and atopic dogs. In this study, we performed D-squames® tape stripping with standardized pressure on seven healthy beagle dogs. A control site was defined and then 25 strips, 50 strips and as many strips as needed to achieve a shiny appearance of the skin were performed on three different experimental sites. After stripping, blinded histopathological examination of a skin biopsy from each site was performed. The number of tape strips required for the skin to become shiny varied between individuals, with a mean of 40 (29–50) strips. There was no significant difference in SC depth between the control site and the site that underwent 25 tape strips. In contrast, the use of 50 strips removed almost all of the SC, with a mean remaining SC depth of 7.82 µm. These data suggest that this non-invasive method can effectively remove the SC, with individual variability, and that a shiny appearance of the skin after stripping can be used as an accurate marker of SC removal. Full article
(This article belongs to the Collection Advances in Animal Dermatology)
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14 pages, 3549 KB  
Article
Characterization of Two Transposable Elements and an Ultra-Conserved Element Isolated in the Genome of Zootoca vivipara (Squamata, Lacertidae)
by Marcello Mezzasalma, Teresa Capriglione, Larissa Kupriyanova, Gaetano Odierna, Maria Michela Pallotta, Agnese Petraccioli, Orfeo Picariello and Fabio M. Guarino
Life 2023, 13(3), 637; https://doi.org/10.3390/life13030637 - 24 Feb 2023
Cited by 2 | Viewed by 2469
Abstract
Transposable elements (TEs) constitute a considerable fraction of eukaryote genomes representing a major source of genetic variability. We describe two DNA sequences isolated in the lizard Zootoca vivipara, here named Zv516 and Zv817. Both sequences are single-copy nuclear sequences, including a truncation [...] Read more.
Transposable elements (TEs) constitute a considerable fraction of eukaryote genomes representing a major source of genetic variability. We describe two DNA sequences isolated in the lizard Zootoca vivipara, here named Zv516 and Zv817. Both sequences are single-copy nuclear sequences, including a truncation of two transposable elements (TEs), SINE Squam1 in Zv516 and a Tc1/Mariner-like DNA transposon in Zv817. FISH analyses with Zv516 showed the occurrence of interspersed signals of the SINE Squam1 sequence on all chromosomes of Z. vivipara and quantitative dot blot indicated that this TE is present with about 4700 copies in the Z. vivipara genome. FISH and dot blot with Zv817 did not produce clear hybridization signals. Bioinformatic analysis showed the presence of active SINE Squam 1 copies in the genome of different lacertids, in different mRNAs, and intronic and coding regions of various genes. The Tc1/Mariner-like DNA transposon occurs in all reptiles, excluding Sphenodon and Archosauria. Zv817 includes a trait of 284 bp, representing an amniote ultra-conserved element (UCE). Using amniote UCE homologous sequences from available whole genome sequences of major amniote taxonomic groups, we performed a phylogenetic analysis which retrieved Prototheria as the sister group of Metatheria and Eutheria. Within diapsids, Testudines are the sister group to Aves + Crocodylia (Archosauria), and Sphenodon is the sister group to Squamata. Furthermore, large trait regions flanking the UCE are conserved at family level. Full article
(This article belongs to the Special Issue Evolutionary and Conservation Genetics: 2nd Edition)
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14 pages, 4504 KB  
Article
3D Molecular Imaging of Stratum Corneum by Mass Spectrometry Suggests Distinct Distribution of Cholesteryl Esters Compared to Other Skin Lipids
by Peter Sjövall, Sebastien Gregoire, William Wargniez, Lisa Skedung and Gustavo S. Luengo
Int. J. Mol. Sci. 2022, 23(22), 13799; https://doi.org/10.3390/ijms232213799 - 9 Nov 2022
Cited by 10 | Viewed by 4252
Abstract
The crucial barrier properties of the stratum corneum (SC) depend critically on the design and integrity of its layered molecular structure. However, analysis methods capable of spatially resolved molecular characterization of the SC are scarce and fraught with severe limitations, e.g., regarding molecular [...] Read more.
The crucial barrier properties of the stratum corneum (SC) depend critically on the design and integrity of its layered molecular structure. However, analysis methods capable of spatially resolved molecular characterization of the SC are scarce and fraught with severe limitations, e.g., regarding molecular specificity or spatial resolution. Here, we used 3D time-of-flight secondary ion mass spectrometry to characterize the spatial distribution of skin lipids in corneocyte multilayer squams obtained by tape stripping. Depth profiles of specific skin lipids display an oscillatory behavior that is consistent with successive monitoring of individual lipid and corneocyte layers of the SC structure. Whereas the most common skin lipids, i.e., ceramides, C24:0 and C26:0 fatty acids and cholesteryl sulfate, are similarly organized, a distinct 3D distribution was observed for cholesteryl oleate, suggesting a different localization of cholesteryl esters compared to the lipid matrix separating the corneocyte layers. The possibility to monitor the composition and spatial distribution of endogenous lipids as well as active drug and cosmetic substances in individual lipid and corneocyte layers has the potential to provide important contributions to the basic understanding of barrier function and penetration in the SC. Full article
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17 pages, 4411 KB  
Article
AVHRR GAC SST Reanalysis Version 1 (RAN1)
by Alexander Ignatov, Xinjia Zhou, Boris Petrenko, Xingming Liang, Yury Kihai, Prasanjit Dash, John Stroup, John Sapper and Paul DiGiacomo
Remote Sens. 2016, 8(4), 315; https://doi.org/10.3390/rs8040315 - 9 Apr 2016
Cited by 33 | Viewed by 10175
Abstract
In response to its users’ needs, the National Oceanic and Atmospheric Administration (NOAA) initiated reanalysis (RAN) of the Advanced Very High Resolution Radiometer (AVHRR) Global Area Coverage (GAC; 4 km) sea surface temperature (SST) data employing its Advanced Clear Sky Processor for Oceans [...] Read more.
In response to its users’ needs, the National Oceanic and Atmospheric Administration (NOAA) initiated reanalysis (RAN) of the Advanced Very High Resolution Radiometer (AVHRR) Global Area Coverage (GAC; 4 km) sea surface temperature (SST) data employing its Advanced Clear Sky Processor for Oceans (ACSPO) retrieval system. Initially, AVHRR/3 data from five NOAA and two Metop satellites from 2002 to 2015 have been reprocessed. The derived SSTs have been matched up with two reference SSTs—the quality controlled in situ SSTs from the NOAA in situ Quality Monitor (iQuam) and the Canadian Meteorological Centre (CMC) L4 SST analysis—and analyzed in the NOAA SST Quality Monitor (SQUAM) online system. The corresponding clear-sky ocean brightness temperatures (BT) in AVHRR bands 3b, 4 and 5 (centered at 3.7, 11, and 12 µm, respectively) have been compared with the Community Radiative Transfer Model simulations in another NOAA online system, Monitoring of Infrared Clear-sky Radiances over Ocean for SST (MICROS). For some AVHRRs, the time series of “AVHRR minus reference” SSTs and “observed minus model” BTs are unstable and inconsistent, with artifacts in the SSTs and BTs strongly correlated. In the official “Reanalysis version 1” (RAN1), data from only five platforms—two midmorning (NOAA-17 and Metop-A) and three afternoon (NOAA-16, -18 and -19)—were included during the most stable periods of their operations. The stability of the SST time series was further improved using variable regression SST coefficients, similarly to how it was done in the NOAA/NASA Pathfinder version 5.2 (PFV5.2) dataset. For data assimilation applications, especially those blending satellite and in situ SSTs, we recommend bias-correcting the RAN1 SSTs using the newly developed sensor-specific error statistics (SSES), which are reported in the product files. Relative performance of RAN1 and PFV5.2 SSTs is discussed. Work is underway to improve the calibration of AVHRR/3s and extend RAN time series, initially back to the mid-1990s and later to the early 1980s. Full article
(This article belongs to the Special Issue Satellite Climate Data Records and Applications)
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