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Keywords = Oryctes rhinoceros nudivirus

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10 pages, 2349 KB  
Article
Comparative Sequence–Structural Analysis of TdNV-Korea Entry Factors Identifies Candidate Regions Associated with Host-Range Variation
by Yoon Ho Park, Rana Kim, Kun-Ho Song and Hyun Suk Jung
Int. J. Mol. Sci. 2026, 27(14), 6250; https://doi.org/10.3390/ijms27146250 - 14 Jul 2026
Viewed by 305
Abstract
Emerging viral variants can affect both commercial insect production and wild insect populations, highlighting the need to identify molecular features associated with viral host range. TdNV-Korea, isolated from the Korean rhinoceros beetle Allomyrina dichotoma (syn. Trypoxylus dichotomus), represents a Korean isolate within [...] Read more.
Emerging viral variants can affect both commercial insect production and wild insect populations, highlighting the need to identify molecular features associated with viral host range. TdNV-Korea, isolated from the Korean rhinoceros beetle Allomyrina dichotoma (syn. Trypoxylus dichotomus), represents a Korean isolate within the Oryctes rhinoceros nudivirus (OrNV) lineage associated with infection of a non-Oryctes scarab host. To define candidate features associated with host-range variation, we compared the sequence and predicted structural properties of viral entry factors across OrNV-related isolates using sequence analysis, structural modeling, and electrostatic surface analysis. The major capsid protein VP39 was highly conserved and served as a comparative baseline, whereas the per os infectivity factors GP106 and GP126 showed greater divergence despite their expected constraints during oral entry. GP106 retained an invariant chitin-binding domain, with substitutions restricted to a peripheral C-terminal region, whereas GP126 concentrated most substitutions within a predicted disordered interdomain segment associated with a localized electrostatic shift on a candidate host-interaction surface. Because functional assays were not performed, these findings should be interpreted as a hypothesis-generating model in which two entry factors follow contrasting modes of sequence change. GP126, and secondarily, the GP106 C-terminal region are prioritized for future experimental validation of nudivirus host-range determinants. Full article
(This article belongs to the Special Issue Advances in Protein Structure and Dynamics)
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15 pages, 2834 KB  
Review
Coconut Rhinoceros Beetle in Samoa: Review of a Century-Old Invasion and Prospects for Control in a Changing Future
by Sulav Paudel, Sean D. G. Marshall, Nicola K. Richards, George Hazelman, Pueata Tanielu and Trevor A. Jackson
Insects 2022, 13(5), 487; https://doi.org/10.3390/insects13050487 - 23 May 2022
Cited by 19 | Viewed by 10803
Abstract
It is now more than 100 years since the coconut rhinoceros beetle (CRB: Oryctes rhinoceros L.) was first detected in the Pacific Island state of Samoa. The exotic pest from Asia became the principal pest of coconut palms in Samoa and, from this [...] Read more.
It is now more than 100 years since the coconut rhinoceros beetle (CRB: Oryctes rhinoceros L.) was first detected in the Pacific Island state of Samoa. The exotic pest from Asia became the principal pest of coconut palms in Samoa and, from this first point of invasion, spread to several surrounding countries in the South-West Pacific Ocean. An intensive control operation was initiated, but the beetle could not be eliminated. Various pest management strategies were attempted but had limited success until the introduction of a biological control agent (BCA), Oryctes rhinoceros nudivirus (OrNV), during the late 1960s and early 1970s. The biocontrol release was very successful and became the prime example of “classical biological control” of an insect pest by a virus. Changing economic and social conditions in Samoa and other islands of the Pacific require a re-evaluation of the threat of CRB to coconut production to suggest how the IPM system may be modified to meet future needs. Therefore, it is timely to review the history of CRB in Samoa and summarize experiences in development of an integrated pest management (IPM) system limiting the impact of the pest. We also present results from a recent study conducted in 2020 on the island of Upolu to define the current status of the CRB population and its BCA, OrNV. The lessons from Samoa, with its long history of containment and management of CRB, are applicable to more recent invasion sites. Recommendations are provided to modify the IPM programme to enhance the sustainable control of CRB and support the ongoing coconut replantation program promoted by the Samoan government. Full article
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19 pages, 3347 KB  
Article
Nudivirus Sequences Identified from the Southern and Western Corn Rootworms (Coleoptera: Chrysomelidae)
by Sijun Liu, Thomas W. Sappington, Brad S. Coates and Bryony C. Bonning
Viruses 2021, 13(2), 269; https://doi.org/10.3390/v13020269 - 9 Feb 2021
Cited by 14 | Viewed by 3716
Abstract
Analysis of pooled genomic short read sequence data revealed the presence of nudivirus-derived sequences from U.S. populations of both southern corn rootworm (SCR, Diabrotica undecimpunctata howardi Barber) and western corn rootworm (WCR, Diabrotica virgifera virgifera LeConte). A near complete nudivirus genome sequence was [...] Read more.
Analysis of pooled genomic short read sequence data revealed the presence of nudivirus-derived sequences from U.S. populations of both southern corn rootworm (SCR, Diabrotica undecimpunctata howardi Barber) and western corn rootworm (WCR, Diabrotica virgifera virgifera LeConte). A near complete nudivirus genome sequence was assembled from sequence data for an SCR population with relatively high viral titers. A total of 147,179 bp was assembled from five contigs that collectively encode 109 putative open reading frames (ORFs) including 20 nudivirus core genes. In contrast, genome sequence recovery was incomplete for a second nudivirus from WCR, although sequences derived from this virus were present in three geographically dispersed populations. Only 48,989 bp were assembled with 48 putative ORFs including 13 core genes, representing about 20% of a typical nudivirus genome. Phylogenetic analysis indicated that both corn rootworm nudiviruses grouped with the third known nudivirus of beetles, Oryctes rhinoceros nudivirus in the genus Alphanudivirus. On the basis of phylogenetic and additional analyses, we propose further taxonomic separation of nudiviruses within Alphanudivirus and Betanudivirus into two subfamilies and five genera. Identification of nudivirus-derived sequences from two species of corn rootworm highlights the diversity of viruses associated with these agricultural insect pests. Full article
(This article belongs to the Special Issue Evolution and Diversity of Insect Viruses)
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