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Article

Identification of Potential Repurposable Drugs in Alzheimer’s Disease Exploiting a Bioinformatics Analysis

1
Department of Computer, Control and Management Engineering, Sapienza University of Rome, 00185 Rome, Italy
2
Institute for Systems Analysis and Computer Science “Antonio Ruberti”, National Research Council, 00185 Rome, Italy
3
Department of Translational and Precision Medicine, Sapienza University of Rome, 00185 Rome, Italy
*
Author to whom correspondence should be addressed.
J. Pers. Med. 2022, 12(10), 1731; https://doi.org/10.3390/jpm12101731
Submission received: 27 September 2022 / Revised: 7 October 2022 / Accepted: 10 October 2022 / Published: 18 October 2022

Abstract

Alzheimer’s disease (AD) is a neurologic disorder causing brain atrophy and the death of brain cells. It is a progressive condition marked by cognitive and behavioral impairment that significantly interferes with daily activities. AD symptoms develop gradually over many years and eventually become more severe, and no cure has been found yet to arrest this process. The present study is directed towards suggesting putative novel solutions and paradigms for fighting AD pathogenesis by exploiting new insights from network medicine and drug repurposing strategies. To identify new drug–AD associations, we exploited SAveRUNNER, a recently developed network-based algorithm for drug repurposing, which quantifies the vicinity of disease-associated genes to drug targets in the human interactome. We complemented the analysis with an in silico validation of the candidate compounds through a gene set enrichment analysis, aiming to determine if the modulation of the gene expression induced by the predicted drugs could be counteracted by the modulation elicited by the disease. We identified some interesting compounds belonging to the beta-blocker family, originally approved for treating hypertension, such as betaxolol, bisoprolol, and metoprolol, whose connection with a lower risk to develop Alzheimer’s disease has already been observed. Moreover, our algorithm predicted multi-kinase inhibitors such as regorafenib, whose beneficial effects were recently investigated for neuroinflammation and AD pathology, and mTOR inhibitors such as sirolimus, whose modulation has been associated with AD.
Keywords: network theory; drug repurposing; dementia network theory; drug repurposing; dementia

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MDPI and ACS Style

Fiscon, G.; Sibilio, P.; Funari, A.; Conte, F.; Paci, P. Identification of Potential Repurposable Drugs in Alzheimer’s Disease Exploiting a Bioinformatics Analysis. J. Pers. Med. 2022, 12, 1731. https://doi.org/10.3390/jpm12101731

AMA Style

Fiscon G, Sibilio P, Funari A, Conte F, Paci P. Identification of Potential Repurposable Drugs in Alzheimer’s Disease Exploiting a Bioinformatics Analysis. Journal of Personalized Medicine. 2022; 12(10):1731. https://doi.org/10.3390/jpm12101731

Chicago/Turabian Style

Fiscon, Giulia, Pasquale Sibilio, Alessio Funari, Federica Conte, and Paola Paci. 2022. "Identification of Potential Repurposable Drugs in Alzheimer’s Disease Exploiting a Bioinformatics Analysis" Journal of Personalized Medicine 12, no. 10: 1731. https://doi.org/10.3390/jpm12101731

APA Style

Fiscon, G., Sibilio, P., Funari, A., Conte, F., & Paci, P. (2022). Identification of Potential Repurposable Drugs in Alzheimer’s Disease Exploiting a Bioinformatics Analysis. Journal of Personalized Medicine, 12(10), 1731. https://doi.org/10.3390/jpm12101731

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