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Article

Machine Learning Models for Predicting Personalized Tacrolimus Stable Dosages in Pediatric Renal Transplant Patients

by
Sergio Sánchez-Herrero
1,
Laura Calvet
2 and
Angel A. Juan
3,*
1
Department of Computer Science, Multimedia and Telecommunication, Universitat Oberta de Catalunya, 08018 Barcelona, Spain
2
Telecommunications and Systems Engineering Department, Universitat Autònoma de Barcelona, Carrer Emprius, 2, 08202 Sabadell, Spain
3
Research Center on Production Management and Engineering, Universitat Politècnica de València, Plaza Ferrandiz-Salvador, 03801 Alcoy, Spain
*
Author to whom correspondence should be addressed.
BioMedInformatics 2023, 3(4), 926-947; https://doi.org/10.3390/biomedinformatics3040057
Submission received: 11 August 2023 / Revised: 8 October 2023 / Accepted: 12 October 2023 / Published: 14 October 2023
(This article belongs to the Special Issue Feature Papers on Methods in Biomedical Informatics)

Abstract

Tacrolimus, characterized by a narrow therapeutic index, significant toxicity, adverse effects, and interindividual variability, necessitates frequent therapeutic drug monitoring and dose adjustments in renal transplant recipients. This study aimed to compare machine learning (ML) models utilizing pharmacokinetic data to predict tacrolimus blood concentration. This prediction underpins crucial dose adjustments, emphasizing patient safety. The investigation focuses on a pediatric cohort. A subset served as the derivation cohort, creating the dose-prediction algorithm, while the remaining data formed the validation cohort. The study employed various ML models, including artificial neural network, RandomForestRegressor, LGBMRegressor, XGBRegressor, AdaBoostRegressor, BaggingRegressor, ExtraTreesRegressor, KNeighborsRegressor, and support vector regression, and their performances were compared. Although all models yielded favorable fit outcomes, the ExtraTreesRegressor (ETR) exhibited superior performance. It achieved measures of 0.161 for MPE, 0.995 for AFE, 1.063 for AAFE, and 0.8 for R2, indicating accurate predictions and meeting regulatory standards. The findings underscore ML’s predictive potential, despite the limited number of samples available. To address this issue, resampling was utilized, offering a viable solution within medical datasets for developing this pioneering study to predict tacrolimus trough concentration in pediatric transplant recipients.
Keywords: machine learning; pharmacokinetics; therapeutic drug monitoring; modeling; personalized medicine machine learning; pharmacokinetics; therapeutic drug monitoring; modeling; personalized medicine

Share and Cite

MDPI and ACS Style

Sánchez-Herrero, S.; Calvet, L.; Juan, A.A. Machine Learning Models for Predicting Personalized Tacrolimus Stable Dosages in Pediatric Renal Transplant Patients. BioMedInformatics 2023, 3, 926-947. https://doi.org/10.3390/biomedinformatics3040057

AMA Style

Sánchez-Herrero S, Calvet L, Juan AA. Machine Learning Models for Predicting Personalized Tacrolimus Stable Dosages in Pediatric Renal Transplant Patients. BioMedInformatics. 2023; 3(4):926-947. https://doi.org/10.3390/biomedinformatics3040057

Chicago/Turabian Style

Sánchez-Herrero, Sergio, Laura Calvet, and Angel A. Juan. 2023. "Machine Learning Models for Predicting Personalized Tacrolimus Stable Dosages in Pediatric Renal Transplant Patients" BioMedInformatics 3, no. 4: 926-947. https://doi.org/10.3390/biomedinformatics3040057

APA Style

Sánchez-Herrero, S., Calvet, L., & Juan, A. A. (2023). Machine Learning Models for Predicting Personalized Tacrolimus Stable Dosages in Pediatric Renal Transplant Patients. BioMedInformatics, 3(4), 926-947. https://doi.org/10.3390/biomedinformatics3040057

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