Phylogenetic Position of African Punctoid Snails (Stylommatophora, Punctoidea, Trachycystinae)
Abstract
:1. Introduction
2. Material and Methods
2.1. Taxon Sampling
2.2. DNA Extraction, Amplification and Sequencing
2.3. Sequence Assembly and Alignment
2.4. Phylogenetic Analysis
3. Results
4. Discussion
5. Conclusions
Superfamily Rhytidoidea Pilsbry, 1893 |
Family Acavidae Pilsbry, 1895 |
Genus Reticulapex Emberton & Pearce, 2000 |
Superfamily Punctoidea Morse, 1864 |
Family Endodontidae Pilsbry, 1895 |
Family Cystopeltidae Cockerell, 1891 |
Family Punctidae Morse, 1864 |
Family “Charopidae” Hutton, 1884 |
Subfamily Charopinae Hutton, 1884 |
Subfamily Flammoconchinae Schileyko, 2001 |
Genus Flammoconcha Dell, 1952 |
Genus Therasiella Powell, 1948 |
Subfamily Trachycystinae Schileyko, 1986 |
Genus Afrodonta Melvill & Ponsonby, 1908 |
Genus Chalcocystis H. Watson, 1934 |
Genus Chilocystis H. Watson, 1934 |
Genus Phortion Preston, 1910 |
Genus Psichion Gude, 1911 |
Genus Trachycystis Pilsbry, 1893 |
Genus Xerocystis H. Watson, 1934 |
Superfamily Helicarionoidea Bourguignat, 1877 |
Helicarionoidea incertae sedis |
Genus Pilula E. von Martens, 1898 |
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
References
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Species | COI | 16S | ITS2+28S | Voucher | Provenance |
---|---|---|---|---|---|
African Charopidae | |||||
Afrodonta bilamellaris Melvill & Ponsonby, 1908 | ON365470 | ON374086 | ON376035 | NMSA-Mol 0W9618 | South Africa, KwaZulu-Natal, Port Shepstone, Four Man’s Hill |
Chalcocystis viridula (Connolly, 1939) | — | ON374088 | ON376037 | NMSA-Mol 0W9407 | South Africa |
Chilocystis calorama (Melvill & Ponsonby, 1899) | ON365472 | ON374089 | ON376038 | NMSA-Mol 0W9636 | South Africa, KwaZulu-Natal, Port Shepstone, Simuma Hill |
Chilocystis scolopendra (Melvill & Ponsonby, 1903) | ON365473 | ON374090 | ON376039 | NMSA-Mol 0W7837 | South Africa, KwaZulu-Natal, Port Shepstone, Hlokohloko Valley |
Phortion oconnori (Preston, 1912) | ON365475 | ON374092 | ON376041 | NMSA-Mol 0W8889 | South Africa, Western Cape, Bainskloof Pass |
Psichion inclara (Morelet, 1889) | ON365478 | ON374095 | ON376043 | NMSA-Mol 0W9163 | South Africa, Eastern Cape, Woody Cape Nature Reserve |
Trachycystis bathycoele (Melvill & Ponsonby, 1892) | ON365481 | — | — | NMSA-Mol 0P0178 | South Africa, Limpopo, Entabeni Forest |
Trachycystis glanvilliana (Ancey, 1890) | ON365482 | ON374097 | ON376047 | NMSA-Mol 0W7149 | South Africa, KwaZulu-Natal, Karkloof Falls |
Trachycystis tollini (Benson, 1856) | — | — | ON376048 * | NMSA-Mol 0W9407 | South Africa, Western Cape, Platbos Forest Reserve |
Xerocystis capensis (L. Pfeiffer, 1841) | — | — | ON376049 * | NMSA-Mol 0W8893 | South Africa, Western Cape, De Hoop Nature Reserve |
African taxa, not Charopidae | |||||
Pilula cordemoyi (G. Nevill, 1870) | ON365476 | ON374093 | — | UF 415477 | Réunion Island, Basse Valley |
Reticulapex michellae K.C. Emberton et al., 2010 | ON365479 | — | ON376044 | UF 421124 | Madagascar, Andriantantely Massif |
Reticulapex sp. | — | — | ON376045 | UF 421119 | Madagascar, Andriantantely Massif |
New Zealand Charopidae | |||||
Cavellia buccinella (Reeve, 1852) | ON365471 | ON374087 | ON376036 | OZD Cabuc-1 | New Zealand, Northland, Kaipara |
Flammoconcha cumberi (Powell, 1941) | ON365474 | ON374091 | ON376040 | OZD FB29 | New Zealand, West Coast, Grange Ridge |
Pseudallodiscus ponderi Climo, 1971 | ON365477 | ON374094 | ON376042 | OZD Ppond-1 | New Zealand, Auckland, Pahiatua Hill Scenic Reserve |
Therasiella celinde (Gray, 1850) | ON365480 | ON374096 | ON376046 | OZD FB116 | New Zealand, Waikato, Pokeno |
Species | COI | 16S | ITS2+28S | Provenance of Voucher |
---|---|---|---|---|
Charopidae | ||||
Allodiscus dimorphus (Reeve, 1852) | MN792581 | MN756708 | MN782439 | New Zealand, Auckland, Waitakere Ranges, Titirangi, Atkinson Track |
Alsolemia longstaffae (Suter, 1913) | MN792582 | MN756709 | MN759313 | New Zealand, Southland, Colac Bay |
Chalcocystis aenea (F. Krauss, 1848) | MN792590 | MN756717 | MN782447 | South Africa, KwaZulu-Natal, Hluhluwe |
Charopa coma (Gray, 1843) | MN792591 | MN756718 | MN782448 | New Zealand, Auckland, Waitakere Ranges, Titirangi, Paturoa Stream |
Fectola infecta (Reeve, 1852) | MN792600 | MN756727 | MN782457 | New Zealand, Waikato, Coromandel Peninsula, Port Charles |
Flammulina zebra (Le Guillou, 1842) | MN792601 | MN756728 | MN782458 | New Zealand, Tasman, Lake Daniells |
Mitodon wairarapa (Suter, 1890) | MN792607 | MN756732 | MN782464 | New Zealand, Southland, Stewart Island, Mason Bay, Gutter |
Mocella eta (Pfeiffer, 1853) | MN792608 | MN756733 | MN782465 | New Zealand, Northland, Umuheke Bay |
Neophenacohelix giveni (Cumber, 1961) | MN792609 | MN756743 | MN782466 | New Zealand, Northland, Whangarei, Coronation Reserve |
Otoconcha dimidiata (L. Pfeiffer, 1853) | MN792614 | MN756738 | MN782471 | New Zealand, Northland, Whangarei, Bream Head |
Phacussa helmsi (Hutton, 1882) | MN792618 | MN756742 | MN782475 | New Zealand, West Coast, Greymouth, Point Elizabeth |
Phenacohelix pilula (Reeve, 1852) | MN792619 | MN756744 | MN782476 | New Zealand, Northland, Whangaruru North Head |
Radioconus amoenus (Thiele, 1927) | MN792623 | MN756749 | MN782481 | Brazil, Santa Catarina, Florianópolis, Gruta do Triângulo |
Radiodiscus sp. | MN792625 | MN756751 | MN782483 | Brazil, Bahia, Ilhéus |
Radiodiscus sp. | MN792626 | MN756752 | MN782484 | Chile, Chiloé, Chiloé National Park, Chepu |
Ranfurlya constanceae Suter, 1903 | MN792627 | MN756753 | MN782485 | New Zealand, Auckland Islands, Adams Island |
Sinployea atiensis (Pease, 1870) | MN792628 | MN756754 | MN782486 | Cook Islands, Rarotonga, Tupapa Valley |
Stenacapha hamiltoni (Cox, 1868) | MN792629 | MN756755 | MN782487 | Australia, Tasmania, Central Plateau, Viormy |
Suteria ide (Gray, 1850) | MN792630 | MN756756 | MN782488 | New Zealand, Manawatu-Wanganui, Bushy Park |
Therasia thaisa Hutton, 1883 | MN792631 | MN756757 | MN782489 | New Zealand, Southland, Clifden, Clifden Limestone Cave System |
Cystopeltidae | ||||
Cystopelta bicolor Petterd & Hedley, 1909 | MN792592 | MN756719 | MN782449 | Australia, Tasmania, Bronte Park |
Diemenoropa kingstonensis (Legrand, 1871) | MN792616 | MN756740 | MN782473 | Australia, Tasmania, Skullbone Plains, Kenneth Lagoon |
Lilloiconcha cf. gordurasensis (Thiele, 1927) | MN792604 | MN756731 | MN782461 | Brazil, Alagoas, Pedra Talhada Biological Reserve |
Lilloiconcha gordurasensis (Thiele, 1927) | MN792605 | — | MN782462 | Brazil, São Paulo, São Paulo, Burle Marx Park |
Lilloiconcha superba (Thiele, 1927) | MN792606 | — | MN782463 | Brazil, Alagoas, Pedra Talhada Biological Reserve |
Scelidoropa officeri (Legrand, 1871) | MN792617 | MN756741 | MN782474 | Australia, Tasmania, Flinders Island, Brougham Sugarloaf |
Zilchogyra sp. | MN792632 | — | MN782490 | Brazil, São Paulo, Cotia, Morro Grande Reserve |
Endodontidae | ||||
Libera fratercula (Pease, 1867) | MN792603 | MN756730 | MN782460 | Cook Islands, Rarotonga, Tupapa |
Punctidae | ||||
Laoma leimonias (Gray, 1850) | MN792602 | MN756729 | MN782459 | New Zealand, Northland, Kaihu, Maropiu Road |
Paralaoma servilis (Shuttleworth, 1852) | MN792615 | MN756739 | MN782472 | New Zealand, Southland, Colac Bay |
Phrixgnathus celia Hutton, 1883 | MN792620 | MN756745 | MN782477 | New Zealand, Southland, Stewart Island, Mason Bay |
Punctum californicum Pilsbry, 1898 | MN792621 | MN756746 | MN782478 | USA, California, San Francisco, Presidio, Lincoln Boulevard |
Punctum pygmaeum (Draparnaud, 1801) | MN812719 | MN756747 | MN782479 | UK, Monmouthshire, Monmouth, Pentwyn Farm |
Punctum randolphii (Dall, 1895) | MN792622 | MN756748 | MN782480 | Canada, British Columbia, Pemberton, Riverside Trail, Lillooet River |
Helicarionoidea | ||||
Antiquarion evelynensis Hyman & Köhler, 2020 | MN654044 | MN654081 | — | Australia, Queensland, Milllaa Millaa |
Antiquarion ravenshoe Hyman & Köhler, 2020 | MN654053 | MN654089 | — | Australia, Queensland, Tully |
Mysticarion insuetus Iredale, 1941 | KY662466 | KY662376 | — | Australia, New South Wales, Newcastle |
Nitor subrugatus (Reeve, 1852) | MH248130 | MH255873 | — | Australia, New South Wales, Tooloom National Park |
Sarika resplendens (Philippi, 1847) | MT364982 | MT365763 | MT365707 | Thailand |
Stanisicarion freycineti (Férussac, 1821) | MN073628 | MN073747 | — | Australia, Queensland, Eastern Escarpment Conservation Area |
Rhytidoidea | ||||
Acavus phoenix (L. Pfeiffer, 1854) | — | — | AY014083 | Unknown |
Ampelita lamarei (L. Pfeiffer, 1853) | — | — | KP230504 | Madagascar, Msoala Peninsula |
Embertoniphanta goudotiana (Férussac, 1839) | — | — | KP230517 | Madagascar, Tsingy Beanka, Belitsaka |
Rhytida greenwoodi (Gray, 1850) | KT970868 | KT970900 | KP230525 | New Zealand, Waikato, Raglan |
Trochomorphoidea | ||||
Asperitas trochus (O. F. Müller, 1774) | MT654630 | MT651546 | MT651601 | Indonesia |
Dyakia hugonis (L. Pfeiffer, 1864) | MT803064 | MT741748 | MT741915 | Malaysia, Sabah, Segaliud Lokan Forest Reserve |
Rhinocochlis nasuta (Metcalfe, 1852) | MT803094 | MT741771 | MT741938 | Malaysia, Sarawak, Sibu, Lanjak Entimau |
Outgroup | ||||
Gulella caryatis (Melvill & Ponsonby, 1898) | HQ328133 | HQ328323 | GQ330510 | Namibia |
Subulina octona (Bruguière, 1789) | JX988066 | JX988353 | MF444887 | Palau |
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Salvador, R.B. Phylogenetic Position of African Punctoid Snails (Stylommatophora, Punctoidea, Trachycystinae). Taxonomy 2022, 2, 227-235. https://doi.org/10.3390/taxonomy2020017
Salvador RB. Phylogenetic Position of African Punctoid Snails (Stylommatophora, Punctoidea, Trachycystinae). Taxonomy. 2022; 2(2):227-235. https://doi.org/10.3390/taxonomy2020017
Chicago/Turabian StyleSalvador, Rodrigo Brincalepe. 2022. "Phylogenetic Position of African Punctoid Snails (Stylommatophora, Punctoidea, Trachycystinae)" Taxonomy 2, no. 2: 227-235. https://doi.org/10.3390/taxonomy2020017
APA StyleSalvador, R. B. (2022). Phylogenetic Position of African Punctoid Snails (Stylommatophora, Punctoidea, Trachycystinae). Taxonomy, 2(2), 227-235. https://doi.org/10.3390/taxonomy2020017