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Proceeding Paper

A One Pot Synthesis of Diketopiperazines via Multicomponent Reactions Based on Isocyanides †

by
Alejandro Corona-Díaz
,
Diana G. García García
,
Shirikant G. Pharande
,
Manuel A. Rentería-Gómez
and
Rocío Gámez-Montaño
*
Departamento de Química, Universidad de Guanajuato, Noria Alta S/N, Col. Noria Alta, Guanajuato 36050, Mexico
*
Author to whom correspondence should be addressed.
Presented at the 26th International Electronic Conference on Synthetic Organic Chemistry, 15–30 November 2022; Available online: https://sciforum.net/event/ecsoc-26.
Chem. Proc. 2022, 12(1), 79; https://doi.org/10.3390/ecsoc-26-13648
Published: 16 November 2022

Abstract

:
2,5-DKPs are heterocyclic peptidomimetics, present in nature with high structural diversity, popular in the design of new bioactive molecules with potential application in medicinal chemistry, exhibiting anticancer and antimicrobial properties, among others. Therefore, in the present work, we report the one-pot synthesis of 2,5-DKPs and their links to another heterocycle 1,4-disubstituted 1,2,3-triazole under mild reaction conditions by one-pot process via the sequence IMCR/postransformation/CuAAC with several advantages over previously reported conventional methods.

1. Introduction

During the last three decades, there has been a considerable increase in reports on the synthesis, reactivity and biological properties of 2,5-diketopiperazines (2,5-DKPs) [1]. These compounds were discovered in 1880 and later studied by E. Fischer [2]. They occur in nature as the simplest cyclic forms of peptides. The 2,5-DKP core is made up of a six-membered bis-lactam ring; this core is widely distributed in natural molecules, with different complexity produced by biosynthetic modifications of cyclic dipeptides. Various derivatives of 2,5-DKP have been isolated, for example, from plants, fungi, and bacteria, while a wide variety of these compounds have shown a variety of biological properties of interest, such as anticancer, antioxidant, antiviral, antibacterial, anti-inflammatory, and other effects [1,2]. Due to their rigid conformation, high resistance to enzymatic degradation, and cell permeability, they have emerged in recent years as biologically validated platforms for drug discovery [1,2].
The synthesis by conventional multi-step methodology of 2,5-Diketopiperazines (2,5 DKP) has several disadvantages, such as limited structural diversification, drastic conditions, low global yields, the use of a large number of reagents and solvents, and others. On the other hand, multicomponent reactions (MCRs) have attracted the interest of various researchers in organic synthesis [3,4,5,6,7,8] due to their efficiency in the formation of several bonds in a reaction step, considering that saving the number of steps is crucial to achieve a reduction in the waste generated in the purification processes of the intermediates of the synthesis route, which contributes significantly to the development of environmentally friendly strategies.
Vroemans R. in 2018 reported a three-step protocol for the assembly of triazolobenzodiazepine-fused diketopiperazines (Scheme 1) [7].
The synthesis was initiated by the Ugi reaction, considering that the product contains orthogonal substituents for further post-transformations. The Ugi adducts were then subjected to a base-induced ring closing and an intramolecular azide–alkyne cycloaddition reaction (CuAAC) in succession to obtain highly fused benzodiazepine frameworks [7]. Recently, our group reported the mechanochemical synthesis of DKPs via the four-component Ugi reaction (MC-Ugi-4CR) with high yields, free of solvent, and catalyst, at room temperature (Scheme 1) [3].
Herein, we report a one-pot synthesis of DKPs linked to another heterocycle 1,4-disubstituted 1,2,3-triazole in ecofriendly reaction conditions.

2. Results and Discussion

First, we use the conditions for Ugi-4CR previously reported by us in 2018 [8]. The formation of Ugi-4CR product (11a) was made by the simple mixing of benzaldehyde (8a), propargylamine (2), cyclohexyl isocyanide (4a), and chloroacetic acid (3a) using InCl3 in MeOH at room temperature. Subsequent, the Ugi-adduct (9a) was initially subjected to lactamization with an inorganic base (KOH) to cycle the linear peptide-like Ugi-adduct into the DKP (10a). Unfortunately, the result was the decomposition of the reaction crude. We tested Cs2CO3 as a base, which resulted in the complete conversion of (9a); these results are show in Table 1. Lately, the cyclized product 11a was subjected to a click reaction without purification. When the Cu(OAc)2 (Table 1) was used as a catalyst, the product 11a was obtained in 40%, but when we used CuSO4 as a catalyst and sodium ascorbate as a reducing agent, the yield was 50% (Table 1).
The conditions shown in entry 2 and 4 were utilized to synthesize a series of four functionalized DKPs (Scheme 2). The versatility of the developed methodology was explored using different orthogonal bifunctional reagents. The products (11ad) were obtained in moderate yields (47–50%). The products were purified by silica-gel column chromatography to afford the desired products; the structure of the isolated product was confirmed by 1H y 13C NMR (Figure 1).

3. Experimental Section

3.1. General Information, Instrumentation and Chemicals

1H and 13C NMR spectra were acquired on Bruker Advance III spectrometer (500 MHz). The solvent for NMR samples was CDCl3. Chemical shifts are reported in parts per million (δ/ppm). Tetramethylsilane was used as an internal reference for NMR (δH = 0 ppm). Coupling constants are reported in Hertz (J/Hz). Multiplicities of the signals are reported using the standard abbreviations: singlet (s), doublet (d), triplet (t), doublets of doublet and multiplet (m). HRMS spectra were acquired via electrospray ionization ESI (+) and recorded using the TOF method. The reaction progress was monitored by TLC, and the spots were visualized under UV light (254–365 nm). The products were isolated via precipitation method using dichloromethane/hexane as solvent system or via flash column chromatography using silica gel (230–400 mesh) and eluents in different proportions. Melting points were determined on a Fisher–Johns apparatus and are uncorrected. Commercially available reagents were used without further purification. Structures names and drawings were performed using the ChemBioDraw software (version 16.0.1.4(61)).

3.2. General Procedure (11ad)

To a solution of 0.5 M anhydrous MeOH, aldehyde 50 mg, propargylamine (1 eq) was added and stirred for 5 min, followed by addition of InCl3 (10 mol%), isocyanide (1 eq) and monochloro acetic acid (1 eq) and stirred for 24 h at room temperature till completion of reaction was observed on TLC. Later, the solvent was evaporated under reduced pressure. Next, the same flask with the dry product was charged with EtOH (1 M) and Cs2CO3 (1 eq) and was stirred and monitored by TLC for 5 h to induced cyclization; once the reaction was completed, the EtOH was evaporated in vacuo, and 1 M solution of t-BuOH: H2O (1:1) and 3,4 dimethoxy azide sodium ascorbate (40 mol%) and CuSO4.H2O (10 mol%) were added, and the reaction mixture was stirred for another 2 h to completion of click reaction. Subsequent, the crude of the reaction was extracted with EtOAc and water (3 × 30 mL). Organic layer was dried with Na2SO4 and evaporated in vacuo. The product pure 11a11b was obtained by precipitation using dichloromethane/hexane, to obtain the product pure 11c11d. Purification by flash column chromatography using silica gel (230–400 mesh), and Hexane/ EtOAc (3:7 v/v) as a mobile phase was performed.

3.3. Spectral Data

3.3.1. 1-cyclohexyl-4-((1-(3,4-dimethoxyphenyl)-1H-1,2,3-triazol-4-yl) methyl)-3-phenylpiperazine-2,5-dione (11a)

Chemproc 12 00079 i002
According to GP, Benzaldehyde (50 mg, 0.47 mmol), propargylamine (0.03 mL, 0.47 mmol), InCl3 (10 mol%), cyclohexyl isocyanide (0.06 mL, 0.47 mmol), and 2-chloroacetic acid (44.52 mg, 0.47 mmol) give as a product of synthesis a white solid (219.0 mg, 50%), mp = 182–183 °C, Rf = 0.3 (Hex/AcOEt = 2/8 v/v). 1H NMR (500 MHz, CDCl3) δ 7.89 (s, 1H), 7.43–7.35 (m, 5H), 7.30 (s, 1H), 7.15–7.11 (m, 1H), 6.96–6.92 (m, 1H), 5.34–5.27 (m, 3H), 4.30–4.22 (m, 1H), 4.07–3.99 (m, 2H), 3.98–3.92 (m, 6H), 1.82–1.73 (m, 2H), 1.69–1.54 (m, 4H), 1.42–1.24 (m, 4H). 13C NMR (126 MHz, CDCl3) δ 164.7, 164.0, 149.7, 149.5, 142.9, 135.5, 130.5, 129.3, 128.8, 126.7, 121.6, 112.5, 111.1, 105.0, 64.1, 56.3, 56.2, 52.7, 44.7, 39.3, 29.4, 29.1, 25.4, 25.3 (2). HRMS (ESI+): m/z calcd. for C27H31N5O4Na+ [M+Na]+ 512.2274, found 512.2376.

3.3.2. 1-cyclohexyl-4-((1-(3,4-dimethoxyphenyl)-1H-1,2,3-triazol-4-yl) methyl)-3-(4-nitrophenyl) piperazine-2,5-dione (11b)

Chemproc 12 00079 i003
According to GP, 4-nitrobenzaldehyde (50 mg, 0.33 mmol), propargylamine (0.02 mL, 0.33 mmol), InCl3 (10 mol%), cyclohexyl isocyanide (0.04 mL, 0.33 mmol), and 2-chloroacetic acid (31.26 mg, 0.33 mmol) give as a product of synthesis a white solid (168 mg, 50%), mp = 184–185 °C, Rf = 0.3 (Hex/AcOEt = 2/8 v/v). 1H NMR (500 MHz, CDCl3) δ 8.17 (d, J = 8.3 Hz, 2H), 8.09–8.05 (m, 1H), 7.92 (s, 1H), 7.52 (d, J = 8.4 Hz, 2H), 7.21 (s, 1H), 7.09 (d, J = 8.8 Hz, 1H), 6.95 (d, J = 8.5 Hz, 1H), 4.62 (d, J = 15.5 Hz, 1H), 4.37 (d, J = 15.7 Hz, 1H), 3.94 (s, 6H), 3.86–3.81 (m, 1H), 3.23 (d, J = 15.3 Hz, 1H), 2.03–1.90 (m, 2H), 1.78–1.60 (m, 5H), 1.42–1.30 (m, 4H). 13C NMR (126 MHz, CDCl3) δ 167.7, 167.3, 149.9, 147.7, 144.7, 130.0, 127.6, 123.9, 121.3, 112.8, 111.2, 105.0, 66.2, 56.3, 51.9, 49.7, 36.4, 32.7, 32.6, 25.4, 25.0. HRMS (ESI+): m/z calcd. for C27H31N6O6Na+ [M+Na]+ 557.2125, found 557.2114.

3.3.3. 1-(tert-butyl)-4-((1-(3,4-dimethoxyphenyl)-1H-1,2,3-triazol-4-yl) methyl)-3-phenylpiperazine-2,5-dione (11c)

Chemproc 12 00079 i004
According to GP, Benzaldehyde (50 mg, 0.47 mmol), propargylamine (0.03 mL, 0.47 mmol), InCl3 (10 mol%), tertbutyl isocyanide (0.05 mL, 0.47 mmol), and 2-chloroacetic acid (39.17 mg, 0.47 mmol) give as a product of synthesis a white solid (203 mg, 47%), mp = 176–177 °C, Rf = 0.3 (Hex/AcOEt = 2/8 v/v). 1H NMR (500 MHz, CDCl3) δ 7.90 (s, 1H), 7.42–7.33 (m, 5H), 7.31 (S, 1H), 7.14–7.11 (m, 1H), 6.96–6.93 (m, 1H), 5.30–5.25 (m, 1H), 5.15 (s, 1H), 4.17–4.01 (m, 3H), 3.97–3.92 (m, 6H), 1.37 (s, 9H). 13C NMR (126 MHz, CDCl3) δ 165.2, 164.9, 149.8, 149.5, 142.8, 135.8, 130.5, 129.2, 128.7, 126.7, 121.7, 112.5, 111.2, 105.0, 65.1, 58.1, 56.3, 56.2, 46.9, 39.2, 27.7. HRMS (ESI+): m/z calcd. for C25H29N5O4+ [M+Na]+ 486.2117, found 486.2112.

3.3.4. 1-(tert-butyl)-4-((1-(3,4-dimethoxyphenyl)-1H-1,2,3-triazol-4-yl) methyl)-3-(4-nitrophenyl) piperazine-2,5-dione (11d)

Chemproc 12 00079 i005
Based on GP, 4-nitrobenzaldehyde (50 mg, 0.33 mmol), propargylamine (0.02 mL, 0.30 mmol), InCl3 (10 mol%), tertbutyl isocyanide (0.04 mL, 0.33 mmol), and 2-chloroacetic acid (31.26 mg, 0.33 mmol) give as a product of synthesis a white solid (156.4 mg, 47%), mp = 179–180 °C, Rf = 0.3 (Hex/AcOEt = 2/8 v/v) 1H NMR (500 MHz, CDCl3) δ 8.16–8.12 (m, 2H), 7.92 (s, 1H), 7.64 (s, 1H), 7.50–7.46 (m, 2H), 7.18 (s, 1H), 7.09–7.05 (m, 1H), 6.95–6.91 (m, 1H), 4.62–4.57 (m, 1H), 4.49–4.43(m, 1H), 3.92 (s, 6H), 3.85–3.89 (m, 1H), 3.18–3.13 (m, 1H), 1.43 (s, 9H).13C NMR (126 MHz, CDCl3) δ 167.75, 167.47, 149.90, 149.83, 147.64, 145.03, 127.55, 123.91, 112.69, 111.26, 104.88, 66.69, 56.23, 52.90, 51.71, 36.19, 28.28. HRMS (ESI+): m/z calcd. for C25H28N6O6+ 509.2070, found 509.2074.

4. Conclusions

This work contributes a novel one-pot synthesis of peptidomimetics as 2,5-DKP linked to another heterocycle 1,4-disubstituted 1,2,3-triazole (11ad), via an IMCR/post-transformation/CuAAC strategy in environmentally friendly conditions. The one-pot consecutive process was developed by combining two powerful tools (IMCR and click), resulting in a convergent alternative protocol towards the one-pot synthesis of peptidomimetics of interest in the design of new bioactive molecules. The final products were obtained in yields of 47–50%. This methodology is a contribution to the synthesis of bis-heterocycles of interest to medicinal chemistry.

Author Contributions

Editing, data curation, writing, A.C.-D.; validation, D.G.G.G.; synthetic investigation, methodology, S.G.P.; synthetic investigation, methodology, M.A.R.-G.; supervision, methodology, writing review & editing, funding acquisition, R.G.-M. All authors have read and agreed to the published version of the manuscript.

Funding

R.G.-M. thanks CONACYT for financial support through CONACYT CB-2016-285622 and DAIP-UG, 005/2022 projects. A.C.D. (490344/2907767), S.G.P. (636753/573230) and M.A.R.-G. (707974/585367) thanks CONACYT-México for a scholarship.

Institutional Review Board Statement

Not applicable.

Informed Consent Statement

Not applicable.

Data Availability Statement

Not applicable.

Acknowledgments

Laboratorio Nacional de Caracterizacion de Propiedades Fisicoquímicas y Estructura Molecular (CONACYT-México, Project: 123732).

Conflicts of Interest

The authors declare no conflict of interest.

References

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Scheme 1. Previous reports of synthesis of peptidomimetics as 2,5-DKP linked to another heterocycle 1,4-disubstituted 1,2,3-triazole [8].
Scheme 1. Previous reports of synthesis of peptidomimetics as 2,5-DKP linked to another heterocycle 1,4-disubstituted 1,2,3-triazole [8].
Chemproc 12 00079 sch001
Figure 1. 1H NMR spectrum of compound 11a.
Figure 1. 1H NMR spectrum of compound 11a.
Chemproc 12 00079 g001
Scheme 2. Substrate Scope.
Scheme 2. Substrate Scope.
Chemproc 12 00079 sch002
Table 1. Screening conditions for the synthesis of molecule 11a.
Table 1. Screening conditions for the synthesis of molecule 11a.
Chemproc 12 00079 i001
(i)—Lactamization (entries 1–2)
EntrySolventBaseTimeConversion
1EtOHKOH a1 hDecomp
2EtOHCs2CO3 a5 hC
(ii)—Click reaction (entries 3–4)
EntrySolventCatalystTimeYield 11a (%)
3tBuOH:H2OCu(OAc)2 a,b4 h40
4tBuOH:H2OCuSO4 a,b2 h50
a = stirring, b = with sodium ascorbate, C = conversion, decomp = decomposition.
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MDPI and ACS Style

Corona-Díaz, A.; García García, D.G.; Pharande, S.G.; Rentería-Gómez, M.A.; Gámez-Montaño, R. A One Pot Synthesis of Diketopiperazines via Multicomponent Reactions Based on Isocyanides. Chem. Proc. 2022, 12, 79. https://doi.org/10.3390/ecsoc-26-13648

AMA Style

Corona-Díaz A, García García DG, Pharande SG, Rentería-Gómez MA, Gámez-Montaño R. A One Pot Synthesis of Diketopiperazines via Multicomponent Reactions Based on Isocyanides. Chemistry Proceedings. 2022; 12(1):79. https://doi.org/10.3390/ecsoc-26-13648

Chicago/Turabian Style

Corona-Díaz, Alejandro, Diana G. García García, Shirikant G. Pharande, Manuel A. Rentería-Gómez, and Rocío Gámez-Montaño. 2022. "A One Pot Synthesis of Diketopiperazines via Multicomponent Reactions Based on Isocyanides" Chemistry Proceedings 12, no. 1: 79. https://doi.org/10.3390/ecsoc-26-13648

APA Style

Corona-Díaz, A., García García, D. G., Pharande, S. G., Rentería-Gómez, M. A., & Gámez-Montaño, R. (2022). A One Pot Synthesis of Diketopiperazines via Multicomponent Reactions Based on Isocyanides. Chemistry Proceedings, 12(1), 79. https://doi.org/10.3390/ecsoc-26-13648

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