Molecular Analysis Corroborates the Biogeographic Distribution of “Tako Kurage” as Mastigias albipunctata Stiasny, 1920 (Cnidaria; Scyphozoa) in Japan
Abstract
1. Introduction
2. Materials and Methods
2.1. Sample Collection and Observation
2.2. Morphological Analysis
2.3. Phylogenetic Analysis
2.4. Distribution Mapping
3. Results
4. Discussion
5. Conclusions
Supplementary Materials
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
References
- Souza, M.R.D.; Dawson, M.N. Redescription of Mastigias papua (Scyphozoa, Rhizostomeae) with Designation of a Neotype and Recognition of Two Additional Species. Zootaxa 2018, 4457, 520–536. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Mohd Syazwan, W.; Low, L.B. Mohammed Rizman-Idid First Record in Peninsular Malaysia and Morphological Redescription of Lychnorhiza Malayensis (Scyphozoa: Rhizostomeae: Lychnorhizidae). Raffles Bull. Zool. 2020, 68, 3249. [Google Scholar] [CrossRef]
- Kramp, P.L. Synopsis of the Medusae of the World. J. Mar. Biol. Assoc. United Kingd. 1961, 40, 7–382. [Google Scholar] [CrossRef] [Scilit]
- Uchida, T. The Anatomy and Development of a Rhizostome Medusa, Mastigias papua L. Agassiz, with Observations on the Phylogeny of Rhizostomae. J. Fac. Sci. Univ. Tokyo 1926, 4, 45–95. [Google Scholar]
- Hayashi, K.; Miyake, S. Three Caridean Shrimps Associated With A Medusa From Tanabe Bay, Japan. Publ. SMBL 1968, 16, 11–19. [Google Scholar] [CrossRef] [Scilit] [PubMed][Green Version]
- Kishinouye, K. Description of a New Rhizostoma Mastigias physophora, Nov. sp. Zool. Mag. (Dobutsugaku Zasshi) 1895, 7, 86–88. [Google Scholar]
- Maas, O. Japanische Medusen. In Beiträge Zur Naturgeschichte Ostasiens; Abhandlungen Der Mathematisch-Physikalischen Klasse Der Königlich Bayerischen; Akademie der Wissenschaften: Munich, Germany, 1909; pp. 1–52. [Google Scholar]
- Lesson, R.P. Voyage Autour Du Monde: Exécuté Par Ordre Du Roi, Sur La Corvette de Sa Majesté, La Coquille, Pendant Les Années 1822, 1823, 1824, et 1825; Arthus Bertrand: Paris, France, 1830; Zoologie; Volume 2, Part 1. [Google Scholar]
- Stiasny, G. Die Scyphomedusen-Sammlung des Naturhistorischen Reichsmuseums in Leiden: III. Rhizostomae. Zool. Meded. 1920, 5, 213–230. [Google Scholar]
- Stiasny, G. Studien Über Rhizostomeen Mit Besonderer Berücksichtigung Der Fauna Des Malayischen Archipels Nebst Eine Revision Des Systems. Capita Zool. 1921, 1, 1–179. [Google Scholar]
- Tan, K.C.; Chikuchishin, M.; Ikeda, S.; Tamada, R.; Okuizumi, K.; Nishitani, G.; Ikeda, M.; Ames, C.L. A Comparative Molecular Study of Rhizostome Jellyfishes (Cnidaria, Scyphozoa, Rhizostomeae) from Japan Reveals Variability in Symbiodiniaceae Taxon Associations and Cassiosome Production. Front. Mar. Sci. 2026, 12, 1679299. [Google Scholar] [CrossRef] [Scilit]
- Hamaguchi, Y.; Iida, A.; Nishikawa, J.; Hirose, E. Umbrella of Mastigias papua (Scyphozoa: Rhizostomeae: Mastigiidae): Hardness and Cytomorphology with Remarks on Colors. Plankton Benthos Res. 2021, 16, 221–227. [Google Scholar] [CrossRef] [Scilit]
- Minamoto, T.; Fukuda, M.; Katsuhara, K.R.; Fujiwara, A.; Hidaka, S.; Yamamoto, S.; Takahashi, K.; Masuda, R. Environmental DNA Reflects Spatial and Temporal Jellyfish Distribution. PLoS ONE 2017, 12, e0173073. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Katoh, K.; Standley, D.M. MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability. Mol. Biol. Evol. 2013, 30, 772–780. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Capella-Gutiérrez, S.; Silla-Martínez, J.M.; Gabaldón, T. trimAl: A Tool for Automated Alignment Trimming in Large-Scale Phylogenetic Analyses. Bioinformatics 2009, 25, 1972–1973. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Wong, T.K.F.; Ly-Trong, N.; Ren, H.; Demotte, P.; Baños, H.; Roger, A.J.; Susko, E.; Bielow, C.; Maio, N.D.; Goldman, N.; et al. IQ-TREE 3: Phylogenomic Inference Software Using Complex Evolutionary Models. Mol. Biol. Evol. 2026, 43, msag117. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Kalyaanamoorthy, S.; Minh, B.Q.; Wong, T.K.F.; von Haeseler, A.; Jermiin, L.S. ModelFinder: Fast Model Selection for Accurate Phylogenetic Estimates. Nat. Methods 2017, 14, 587–589. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Hoang, D.T.; Chernomor, O.; von Haeseler, A.; Minh, B.Q.; Vinh, L.S. UFBoot2: Improving the Ultrafast Bootstrap Approximation. Mol. Biol. Evol. 2018, 35, 518–522. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Rambaut, A. FigTree: Tree Figure Drawing Tool, v1.4.4; University of Edinburgh: Edinburgh, UK, 2018.
- Letunic, I.; Bork, P. Interactive Tree of Life (iTOL) v6: Recent Updates to the Phylogenetic Tree Display and Annotation Tool. Nucleic Acids Res. 2024, 52, W78–W82. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Inkscape Project. Inkscape, v.1.4.4; Inkscape Team: Brooklyn, NY, USA, 2026.
- Ronquist, F.; Huelsenbeck, J.P. MrBayes 3: Bayesian Phylogenetic Inference under Mixed Models. Bioinformatics 2003, 19, 1572–1574. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Ronquist, F.; Teslenko, M.; Van Der Mark, P.; Ayres, D.L.; Darling, A.; Höhna, S.; Larget, B.; Liu, L.; Suchard, M.A.; Huelsenbeck, J.P. MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space. Syst. Biol. 2012, 61, 539–542. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- R Core Team. R: A Language and Environment for Statistical Computing; R Foundation for Statistical Computing: Vienna, Austria, 2026. [Google Scholar]
- Wickham, H. Ggplot2: Elegant Graphics for Data Analysis; Springer International Publishing: Cham, Switzerland, 2016; ISBN 978-3-319-24275-0. [Google Scholar]
- Massicotte, P.; South, A. Rnatualearth: World Map Data from Natural Earth. 2026. Available online: https://cran.r-project.org/web/packages/rnaturalearth/index.html (accessed on 16 September 2026).
- Becker, R.A.; Wilks, A.R.; Brownrigg, R.; Minka, T.P.; Deckmyn, A. Maps: Draw Geographical Maps. 2025. Available online: https://cran.r-project.org/web/packages/maps/index.html (accessed on 16 September 2026).
- Pebesma, E. Simple Features for R: Standardized Support for Spatial Vector Data. R J. 2018, 10, 439. [Google Scholar] [CrossRef] [Scilit]
- Pebesma, E.; Bivand, R. Spatial Data Science: With Applications in R, 1st ed.; Chapman and Hall/CRC: Boca Raton, FL, USA, 2023; ISBN 978-0-429-45901-6. [Google Scholar]
- Dawson, M.N. Morphological Variation and Systematics in the Scyphozoa: Mastigias (Rhizostomeae, Mastigiidae)—A Golden Unstandard? Hydrobiologia 2005, 537, 185–206. [Google Scholar] [CrossRef] [Scilit]
- Ames, C.L.; Klompen, A.M.L.; Badhiwala, K.; Muffett, K.; Reft, A.J.; Kumar, M.; Janssen, J.D.; Schultzhaus, J.N.; Field, L.D.; Muroski, M.E.; et al. Cassiosomes Are Stinging-Cell Structures in the Mucus of the Upside-down Jellyfish Cassiopea xamachana. Commun. Biol. 2020, 3, 67. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Lawley, J.W.; Carroll, A.R.; McDougall, C. Rhizostomins: A Novel Pigment Family From Rhizostome Jellyfish (Cnidaria, Scyphozoa). Front. Mar. Sci. 2021, 8, 752949. [Google Scholar] [CrossRef] [Scilit]
- Tan, K.C.; Ames, C.L.; Collins, A.G. Complete Linear Mitochondrial Genomes for Cephea cephea and Mastigias albipunctata (Scyphozoa: Rhizostomeae), with an Analysis of Phylogenetic Relationships. Mitochondrial DNA Part B 2024, 9, 1544–1548. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- McKenna, V.; Archibald, J.M. The Aquatic Symbiosis Genomics Project: Probing the Evolution of Symbiosis across the Tree of Life. Wellcome Open Res. 2021, 6, 254. [Google Scholar] [CrossRef] [Scilit]
- Sugiura, Y. On the Life-History of Rhizostome Medusae II. Indispensability of Zooxanthellae for Strobilation in Mastigias papua. Embryologia 1964, 8, 223–233. [Google Scholar] [CrossRef] [Scilit]
- Sugiura, Y. On the Life-History of Rhizostome Medusae. III. On the Effects of Temperature on the Strobilation of Mastigias papua. Biol. Bull. 1965, 128, 493–496. [Google Scholar] [CrossRef] [Scilit]
- LaJeunesse, T.C.; Parkinson, J.E.; Gabrielson, P.W.; Jeong, H.J.; Reimer, J.D.; Voolstra, C.R.; Santos, S.R. Systematic Revision of Symbiodiniaceae Highlights the Antiquity and Diversity of Coral Endosymbionts. Curr. Biol. 2018, 28, 2570–2580.e6. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Djeghri, N.; Pondaven, P.; Stibor, H.; Dawson, M.N. Review of the Diversity, Traits, and Ecology of Zooxanthellate Jellyfishes. Mar. Biol. 2019, 166, 147. [Google Scholar] [CrossRef] [Scilit]
- Santos, S.R.; Taylor, D.J.; Kinzie, I.; Hidaka, M.; Sakai, K.; Coffroth, M.A. Molecular Phylogeny of Symbiotic Dinoflagellates Inferred from Partial Chloroplast Large Subunit (23S)-rDNA Sequences. Mol. Phylogenetics Evol. 2002, 23, 97–111. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Vega de Luna, F.; Dang, K.-V.; Cardol, M.; Roberty, S.; Cardol, P. Photosynthetic Capacity of the Endosymbiotic Dinoflagellate Cladocopium sp. Is Preserved during Digestion of Its Jellyfish Host Mastigias papua by the Anemone Entacmaea medusivora. FEMS Microbiol. Ecol. 2019, 95, fiz141. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Shimazaki, A. Jellyfish Swarm in Kagoshima in Odd, out of Season Appearance. Asahi Shinbun, 8 November 2021.
- Fernández-Alías, A.; Marcos, C.; Pérez-Ruzafa, A. The Unpredictability of Scyphozoan Jellyfish Blooms. Front. Mar. Sci. 2024, 11, 1349956. [Google Scholar] [CrossRef] [Scilit]
- Pérez-Ruzafa, A.; Gilabert, J.; Gutiérrez, J.M.; Fernández, A.I.; Marcos, C.; Sabah, S. Evidence of a Planktonic Food Web Response to Changes in Nutrient Input Dynamics in the Mar Menor Coastal Lagoon, Spain. In Nutrients and Eutrophication in Estuaries and Coastal Waters; Orive, E., Elliott, M., De Jonge, V.N., Eds.; Springer Netherlands: Dordrecht, The Netherlands, 2002; pp. 359–369. ISBN 978-90-481-6123-2. [Google Scholar]
- Kitamura, M.; Omori, M. Synopsis of Edible Jellyfishes Collected from Southeast Asia, with Notes on Jellyfish Fisheries. Plankton Benthos Res. 2010, 5, 106–118. [Google Scholar] [CrossRef] [Scilit]





Disclaimer/Publisher’s Note: The statements, opinions and data contained in all publications are solely those of the individual author(s) and contributor(s) and not of MDPI and/or the editor(s). MDPI and/or the editor(s) disclaim responsibility for any injury to people or property resulting from any ideas, methods, instructions or products referred to in the content. |
© 2026 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license.
Share and Cite
Tan, K.C.; Chikuchishin, M.; Ikeda, S.; Tamada, R.; Okuizumi, K.; Ames, C.L. Molecular Analysis Corroborates the Biogeographic Distribution of “Tako Kurage” as Mastigias albipunctata Stiasny, 1920 (Cnidaria; Scyphozoa) in Japan. Oceans 2026, 7, 80. https://doi.org/10.3390/oceans7050080
Tan KC, Chikuchishin M, Ikeda S, Tamada R, Okuizumi K, Ames CL. Molecular Analysis Corroborates the Biogeographic Distribution of “Tako Kurage” as Mastigias albipunctata Stiasny, 1920 (Cnidaria; Scyphozoa) in Japan. Oceans. 2026; 7(5):80. https://doi.org/10.3390/oceans7050080
Chicago/Turabian StyleTan, Kei Chloe, Mitsuko Chikuchishin, Shuhei Ikeda, Ryota Tamada, Kazuya Okuizumi, and Cheryl L. Ames. 2026. "Molecular Analysis Corroborates the Biogeographic Distribution of “Tako Kurage” as Mastigias albipunctata Stiasny, 1920 (Cnidaria; Scyphozoa) in Japan" Oceans 7, no. 5: 80. https://doi.org/10.3390/oceans7050080
APA StyleTan, K. C., Chikuchishin, M., Ikeda, S., Tamada, R., Okuizumi, K., & Ames, C. L. (2026). Molecular Analysis Corroborates the Biogeographic Distribution of “Tako Kurage” as Mastigias albipunctata Stiasny, 1920 (Cnidaria; Scyphozoa) in Japan. Oceans, 7(5), 80. https://doi.org/10.3390/oceans7050080

