Drivers of Input and Stabilisation Control Subsoil Organic Carbon Content in Perennial Pasture Grazing Systems
Abstract
1. Introduction
2. Methods
2.1. Study Region
2.2. Soil Collection and Sample Preparation
2.3. Data Collection for Regression Analyses
2.3.1. Environmental Covariates
2.3.2. Soil Physical and Chemical Analyses
2.4. Soil Organic Carbon Stocks
2.5. Data Cleaning and Statistical Analyses
2.6. Random Forest Regression
3. Results
3.1. Model Covariates
3.1.1. Site Summary of Environmental Covariates
3.1.2. Measured Subsoil Physical and Chemical Properties
3.2. Vertical Distribution of SOC Content, Stocks and C:N Ratio
3.3. Model Performance and Variable Importance
4. Discussion
5. Conclusions
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
Abbreviations
| SOC | Soil organic carbon |
| C | Carbon |
| N | Nitrogen |
| C:N | Carbon to nitrogen ratio |
| Fe | Iron |
| Al | Aluminium |
| RF | Random Forest |
| ASC | Australian Soil Classification |
| WRB | World Reference Base |
| MAP | Mean annual precipitation |
| MAT | Mean annual temperature |
| SRTM DEM | Shuttle radar topography mission, digital elevation model |
| DSM | Digital soil mapping |
| MSE | Mean square error |
| NDVI | Normalised difference vegetation index |
| TWI | Topographic wetness index |
| K | Potassium |
| U | Uranium |
| Th | Thorium |
| Si | Silica index |
| MIR | Mid-infra-red |
| PLSR | Partial least squares regression |
| CV | Cross validation |
| VIF | Variance inflation factor |
| OOB | Out-of-bag |
| M | Mafic |
| IU | Intermediate upper |
| SM | Siliceous mid |
| SU | Siliceous upper |
| IQR | Interquartile range |
| %IncMSE | % Increase in mean square error |
| DOC | Dissolved organic carbon |
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| Covariate | scorpan Factor | Scale/Resolution and Year | Source |
|---|---|---|---|
| Australian Soil Classification (ASC) | Soil | 1:250,000 | SEED portal—ASC map |
| Mean Annual Precipitation (MAP) | Climate | 1 s 1976–2005 | SEED Portal—ANUCLIM Annual Mean Rainfall raster layer |
| Mean Annual Temperature (MAT) | Climate | 1 s 1976–2005 | SEED Portal—ANUCLIM Annual Mean Temperature raster layer |
| Normalised Difference Vegetation Index (NDVI) | Organisms | 10 m 2019–2023 | Sentinel 2 SR, level-2A dataset. Google Earth Engine |
| SRTM DEM-S (elevation) | Topography | 30 m 2000 | TERN DSM Raster Covariate Stacks |
| Slope (degrees) | Topography | 30 m | TERN DSM Raster Covariate Stacks |
| Aspect | Topography | 30 m | TERN DSM Raster Covariate Stacks |
| Topographic wetness index (TWI) | Topography | 30 m 2015 | TERN DSM Raster Covariate Stacks |
| Radiometric potassium (K) | Parent material | 30 m 2019 | TERN DSM Raster Covariate Stacks |
| Radiometric uranium (U) | Parent material | 30 m 2019 | TERN DSM Raster Covariate Stacks |
| Radiometric thorium (Th) | Parent material | 30 m 2019 | TERN DSM Raster Covariate Stacks |
| Silica index (Si) | Parent material | 30 m | TERN DSM Raster Covariate Stacks |
| Simplified Surface Lithology | Parent material | 90 m | TERN DSM Raster Covariate Stacks |
| Weathering Index (WI) | Age | 30 m 2018 | TERN DSM Raster Covariate Stacks |
| Site No. Mapped ASC (Number of Samples) | 1 Kurosol (30), Kandosol (6) | 2 Dermosol (18), Kurosol (18) | 3 Kurosol (31), Vertosol (5) | 4 Ferrosol (36) | 5 Kurosol (36) | 6 Kurosol (34), Vertosol (2) | 7 Dermosol (36) | 8 Vertosol (28), Dermosol (8) | 9 Kurosol (23), Kandosol (9), Dermosol (4) |
|---|---|---|---|---|---|---|---|---|---|
| MAP (mm) | 1062–1120 a | 1066–1098 a | 1093–1231 b | 1623–1686 c | 1052–1103 a | 1068–10.95 a | 1142- 1264 b | 1222–1278 bc | 1080–1095 a |
| MAT (°C) | 18.0–18.5 ab | 17.9–18.3 ac | 17.7–18.7 ab | 18.9–19.2 d | 18.3–18.7 ef | 18.5–18.7 de | 16.1–17.0 g | 18.1–18.5 bf | 17.5–17.9 cg |
| NDVI | 0.44–0.64 ab | 0.45–0.56 ac | 0.43–0.64 c | 0.58–0.68 d | 0.46–0.58 abc | 0.50–0.57 abc | 0.52–0.65 de | 0.45–0.59 be | 0.41–0.52 f |
| Elevation | 71.0–129.7 a | 101.3–163.9 a | 56.3–174.6 a | 20.5–83.6 b | 45.8–212.0 b | 45.3–85.4 b | 401.7–444.4 c | 80.4–127.4 a | 184.0–248.3 c |
| Slope (°) | 1.02–8.26 ab | 0.06–9.97 acd | 0.76–12.15 ab | 0.28–14.36 cd | 0.18–7.14 cd | 0.12–4.88 c | 1.42–22.37 ab | 0.27–15.04 ad | 1.35–12.60 b |
| Aspect | −1.0–1.0 | −1.0–0.99 | −1.0–0.99 | −0.98–1.0 | −1.0–1 | −1.0–1.0 | −1.0–1 | −1.0–0.95 | −1.0–0.99 |
| TWI | 6.64–11.50 ab | 5.70–15.88 a | 4.87–19.26 ab | 5.19–19.03 a | 6.23–19.99 a | 6.62–11.58 a | 5.89–13.15 ab | 5.27–13.15 ab | 5.54–14.30 b |
| Thorium | 4.12–6.02 a | 3.90–8.05 a | 2.74–7.66 a | 3.07–4.95 b | 3.97–7.15 a | 2.60–7.76 a | 1.02–5.35 b | 0.99–3.62 b | 2.17–7.29 a |
| Potassium | 0.21–0.53 a | 0.10–0.77 ab | 0.25–0.94 ab | 0.11–0.56 c | 0.15–1.04 ab | 0.24–0.99 ab | −0.52–1.59 c | 0.20–1.24 b | −0.14–0.52 c |
| Uranium | 0.92–1.31 ab | 0.42–1.22 a | 0.71–1.49 ab | 0.95–1.15 a | 1.17–1.37 c | 1.0–1.36 bc | −0.48–0.34 d | −1.29–−0.03 d | −0.75–0.46 d |
| Silica | 79–79 a | 66–79 b | 58–79 ab | 58–69 c | 58–69 c | 69–79 ab | 66–66 c | 58–69 c | 66–66 c |
| WI | 2.98–3.69 a | 2.82–4.21 b | 2.49–4.11 a | 3.0–4.48 b | 3.30–4.3 b | 3.38–4.17 b | 1.02–3.48 c | 1.52–3.29 c | 2.69–3.75 ac |
| Lithology classes | SU (36) | IU (30), SU (6) | IU (3), SM (12), SU (21) | M (36) | M (34), IU (2) | IU (22), SU (14) | IU (36) | M (36) | IU (36) |
| Site No. Mapped ASC Soil Type (Number of Samples) | Organic Carbon (%) | Total Nitrogen (%) | C:N Ratio | BD (g cm3) | pH | Sand (%) | Silt (%) | Clay (%) | Subsoil Proportion (% Relative to Top m) |
|---|---|---|---|---|---|---|---|---|---|
| 1 Kurosol (30), Kandosol (6) | 0.75 a ± 0.61 | 0.04 a ± 0.03 | 17.02 a ± 2.32 | 1.28 ab ± 0.28 | 6.4 abc ± 1.33 | 49 ab ± 17 | 10 a ± 5 | 38 ab ± 13 | 46.33 abc ± 11.49 |
| 2 Dermosol (18), Kurosol (18) | 0.89 ab ± 0.48 | 0.06 abc ± 0.03 | 15.33 ab ± 2.34 | 1.38 a ± 0.2 | 6.74 abd ± 0.66 | 30 cd ± 19 | 21 bc ± 5 | 48 acd ± 14 | 53.71 ad ± 10.64 |
| 3 Kurosol (31), Vertosol (5) | 0.77 ab ± 0.41 | 0.05 ab ± 0.03 | 16.85 a ± 3.73 | 1.02 cd ± 0.22 | 7.02 ad ± 0.78 | 40 ac ± 16 | 17 ab ± 4 | 44 ac ± 15 | 45.42 abc ± 11.83 |
| 4 Ferrosol (36) | 2.34 c ± 0.84 | 0.13 d ± 0.04 | 18.52 a ± 6.37 | 1.2 bc ± 0.24 | 5.41 e ± 0.4 | 21 d ± 13 | 22 cd ± 2 | 59 d ± 12 | 66.01 d ± 14.89 |
| 5 Kurosol (36) | 1.05 b ± 0.48 | 0.06 bc ± 0.03 | 16.84 a ± 3.62 | 1.49 ab ± 0.55 | 6.83 abd ± 0.52 | 25 d ± 15 | 22 cd ± 3 | 53 cd ± 13 | 45.83 abc ± 13.83 |
| 6 Kurosol (34), Vertosol (2) | 0.78 ab ± 0.44 | 0.06 abc ± 0.03 | 12.99 bc ± 2.61 | 1.36 ab ± 0.19 | 6.12 bce ± 1.12 | 23 d ± 20 | 23 cd ± 6 | 54 cd ± 16 | 57.82 d ± 11.71 |
| 7 Dermosol (36) | 0.91 ab ± 0.37 | 0.08 c ± 0.03 | 11.57 c ± 1.74 | 1.02 d ± 0.16 | 5.8 ce ± 0.64 | 58 b ± 7 | 21 bc ± 1 | 28 b ± 7 | 39.19 b ± 8.27 |
| 8 Vertosol (28), Dermosol (8) | 1.11 b ± 0.55 | 0.07 bc ± 0.03 | 15.13 ab ± 2.81 | 1.07 cd ± 0.18 | 7.27 d ± 0.27 | 41 ac ± 9 | 22 cd ± 2 | 39 a ± 8 | 49.02 ac ± 11.57 |
| 9 Kurosol (23), Kandosol (9), Dermosol (4) | 0.71 a ± 0.47 | 0.05 ab ± 0.02 | 13.19 bc ± 4 | 1.29 ab ± 0.18 | 7.17 ad ± 0.98 | 26 d ± 2 | 24 d ± 4 | 48 acd ± 16 | 43.28 bc ± 8.67 |
| Soil Depth | ASC Soil Type | Median Stocks (t ha−1) | SD | Range (IQR25−75) | Median Proportion (% Relative to Top m) |
|---|---|---|---|---|---|
| 0–30 cm | Dermosol | 85.84 a | 25.16 | 74.93–98.55 | 54.44 a |
| Ferrosol | 77.3 a | 15.10 | 69.89–96.76 | 25.65 b | |
| Kandosol | 54.17 b | 29.61 | 22–75.19 | 57.54 a | |
| Kurosol | 59.24 b | 40.42 | 43.14–90.18 | 53.42 a | |
| Vertosol | 76.2 ab | 22.99 | 64.9–90.42 | 52.45 a | |
| 30–100 cm | Dermosol | 65.08 a | 40.89 | 52.11–108.44 | 45.56 a |
| Ferrosol | 187.12 b | 86.65 | 116.75–232.05 | 74.35 b | |
| Kandosol | 38.41 c | 43.01 | 28.13–47.99 | 42.46 a | |
| Kurosol | 57.58 cd | 52.14 | 38.12–85.21 | 46.58 a | |
| Vertosol | 68.75 ad | 40.82 | 54.25–116.61 | 47.55 a |
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McGuinness, E.; Gibson, A.J.; Oakes, J.; Farrell, M.; Wells, N.S. Drivers of Input and Stabilisation Control Subsoil Organic Carbon Content in Perennial Pasture Grazing Systems. Soil Syst. 2026, 10, 33. https://doi.org/10.3390/soilsystems10020033
McGuinness E, Gibson AJ, Oakes J, Farrell M, Wells NS. Drivers of Input and Stabilisation Control Subsoil Organic Carbon Content in Perennial Pasture Grazing Systems. Soil Systems. 2026; 10(2):33. https://doi.org/10.3390/soilsystems10020033
Chicago/Turabian StyleMcGuinness, Evanna, Abraham J. Gibson, Joanne Oakes, Mark Farrell, and Naomi S. Wells. 2026. "Drivers of Input and Stabilisation Control Subsoil Organic Carbon Content in Perennial Pasture Grazing Systems" Soil Systems 10, no. 2: 33. https://doi.org/10.3390/soilsystems10020033
APA StyleMcGuinness, E., Gibson, A. J., Oakes, J., Farrell, M., & Wells, N. S. (2026). Drivers of Input and Stabilisation Control Subsoil Organic Carbon Content in Perennial Pasture Grazing Systems. Soil Systems, 10(2), 33. https://doi.org/10.3390/soilsystems10020033

